RNA–Protein interactions for RNA: ENST00000520986.5

DENND3-215, Transcript of DENN domain containing 3, human

TSL 2

Gene DENND3, Length 899 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DENND3-215	ENST00000520986	RGPD5	Q99666	1765 aa		32.87	■■■□□ 2.85
DENND3-215	ENST00000520986	KIF7	Q2M1P5	1343 aa		32.86	■■■□□ 2.85
DENND3-215	ENST00000520986	SPATA31A1	Q5TZJ5	1347 aa		32.85	■■■□□ 2.85
DENND3-215	ENST00000520986	ONECUT3	O60422	494 aa	Predicted RBP	32.85	■■■□□ 2.85
DENND3-215	ENST00000520986	LARP1	Q6PKG0	1096 aa	Known RBP	32.85	■■■□□ 2.85
DENND3-215	ENST00000520986	ABCC6	O95255	1503 aa		32.85	■■■□□ 2.85
DENND3-215	ENST00000520986	FAM98C	Q17RN3	349 aa	Known RBP	32.82	■■■□□ 2.84
DENND3-215	ENST00000520986	SEPT12	Q8IYM1	358 aa		32.82	■■■□□ 2.84
DENND3-215	ENST00000520986	BRWD3	Q6RI45	1802 aa		32.81	■■■□□ 2.84
DENND3-215	ENST00000520986	PANK3	Q9H999	370 aa		32.81	■■■□□ 2.84
DENND3-215	ENST00000520986	USP35	Q9P2H5	1018 aa		32.78	■■■□□ 2.84
DENND3-215	ENST00000520986	THSD7A	Q9UPZ6	1657 aa		32.78	■■■□□ 2.84
DENND3-215	ENST00000520986	CRB1	P82279	1406 aa		32.77	■■■□□ 2.84
DENND3-215	ENST00000520986	FBLN1	P23142	703 aa		32.77	■■■□□ 2.84
DENND3-215	ENST00000520986	CGNL1	Q0VF96	1302 aa		32.77	■■■□□ 2.84
DENND3-215	ENST00000520986	WDR17	Q8IZU2	1322 aa		32.76	■■■□□ 2.83
DENND3-215	ENST00000520986		A0A0G2JS52	829 aa		32.74	■■■□□ 2.83
DENND3-215	ENST00000520986	MYT1	Q01538	1121 aa		32.74	■■■□□ 2.83
DENND3-215	ENST00000520986	MAP3K19	Q56UN5	1328 aa		32.74	■■■□□ 2.83
DENND3-215	ENST00000520986	CCDC7	Q96M83	1385 aa		32.73	■■■□□ 2.83
DENND3-215	ENST00000520986	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.73	■■■□□ 2.83
DENND3-215	ENST00000520986	BARGIN	Q6ZT62	677 aa		32.72	■■■□□ 2.83
DENND3-215	ENST00000520986	TOM1L2	Q6ZVM7	507 aa		32.72	■■■□□ 2.83
DENND3-215	ENST00000520986	TCP11L2	Q8N4U5	519 aa		32.72	■■■□□ 2.83
DENND3-215	ENST00000520986	WASHC2A	Q641Q2	1341 aa		32.72	■■■□□ 2.83
DENND3-215	ENST00000520986	ANKRD26	Q9UPS8	1709 aa		32.71	■■■□□ 2.83
DENND3-215	ENST00000520986	BLM	P54132	1417 aa	Predicted RBP	32.69	■■■□□ 2.82
DENND3-215	ENST00000520986	CSB-PGBD3	P0DP91	1061 aa		32.69	■■■□□ 2.82
DENND3-215	ENST00000520986	IP6K1	Q92551	441 aa		32.69	■■■□□ 2.82
DENND3-215	ENST00000520986	THRAP3	Q9Y2W1	955 aa	Known RBP	32.69	■■■□□ 2.82
DENND3-215	ENST00000520986	RRS1	Q15050	365 aa	Known RBP	32.68	■■■□□ 2.82
DENND3-215	ENST00000520986	ERBB3	P21860	1342 aa		32.68	■■■□□ 2.82
DENND3-215	ENST00000520986	KRT27	Q7Z3Y8	459 aa		32.67	■■■□□ 2.82
DENND3-215	ENST00000520986	HOXC9	P31274	260 aa		32.66	■■■□□ 2.82
DENND3-215	ENST00000520986	AMPH	P49418	695 aa		32.65	■■■□□ 2.82
DENND3-215	ENST00000520986	ANKRD24	Q8TF21	1146 aa		32.65	■■■□□ 2.82
DENND3-215	ENST00000520986	RTL1	A6NKG5	1358 aa		32.64	■■■□□ 2.82
DENND3-215	ENST00000520986	CARD10	Q9BWT7	1032 aa		32.64	■■■□□ 2.82
DENND3-215	ENST00000520986	WNK3	Q9BYP7	1800 aa		32.64	■■■□□ 2.82
DENND3-215	ENST00000520986	PEAK1	Q9H792	1746 aa		32.63	■■■□□ 2.81
DENND3-215	ENST00000520986	PARP4	Q9UKK3	1724 aa	Known RBP	32.62	■■■□□ 2.81
DENND3-215	ENST00000520986	NSD2	O96028	1365 aa		32.61	■■■□□ 2.81
DENND3-215	ENST00000520986	KNSTRN	Q9Y448	316 aa		32.61	■■■□□ 2.81
DENND3-215	ENST00000520986	FAM208A	Q9UK61	1670 aa	Known RBP	32.59	■■■□□ 2.81
DENND3-215	ENST00000520986	LTV1	Q96GA3	475 aa	Predicted RBP	32.58	■■■□□ 2.81
DENND3-215	ENST00000520986	NLRP2	Q9NX02	1062 aa		32.58	■■■□□ 2.81
DENND3-215	ENST00000520986	MAP2	P11137	1827 aa	Known RBP	32.57	■■■□□ 2.8
DENND3-215	ENST00000520986	KIF24	Q5T7B8	1368 aa		32.57	■■■□□ 2.8
DENND3-215	ENST00000520986	LRRC37A3	O60309	1634 aa		32.56	■■■□□ 2.8
DENND3-215	ENST00000520986	PER1	O15534	1290 aa	Predicted RBP	32.56	■■■□□ 2.8
DENND3-215	ENST00000520986	EMILIN1	Q9Y6C2	1016 aa		32.56	■■■□□ 2.8
DENND3-215	ENST00000520986	FLT4	P35916	1363 aa		32.56	■■■□□ 2.8
DENND3-215	ENST00000520986	DISP2	A7MBM2	1401 aa		32.55	■■■□□ 2.8
DENND3-215	ENST00000520986	AMER1	Q5JTC6	1135 aa	Predicted RBP	32.55	■■■□□ 2.8
DENND3-215	ENST00000520986	FAM182B	Q5T319	152 aa		32.55	■■■□□ 2.8
DENND3-215	ENST00000520986	TNNT2	P45379	298 aa	Predicted RBP	32.53	■■■□□ 2.8
DENND3-215	ENST00000520986	HSP90AB2P	Q58FF8	381 aa		32.53	■■■□□ 2.8
DENND3-215	ENST00000520986	EP400	Q96L91	3159 aa		32.53	■■■□□ 2.8
DENND3-215	ENST00000520986	RGPD2	P0DJD1	1756 aa		32.53	■■■□□ 2.8
DENND3-215	ENST00000520986	CDCA7	Q9BWT1	371 aa	Predicted RBP	32.52	■■■□□ 2.8
DENND3-215	ENST00000520986	INSR	P06213	1382 aa		32.52	■■■□□ 2.8
DENND3-215	ENST00000520986	POLK	Q9UBT6	870 aa		32.51	■■■□□ 2.79
DENND3-215	ENST00000520986	PDE3B	Q13370	1112 aa		32.5	■■■□□ 2.79
DENND3-215	ENST00000520986	MORC1	Q86VD1	984 aa		32.5	■■■□□ 2.79
DENND3-215	ENST00000520986	PPM1G	O15355	546 aa	Predicted RBP	32.49	■■■□□ 2.79
DENND3-215	ENST00000520986	ZEB1	P37275	1124 aa	Predicted RBP	32.48	■■■□□ 2.79
DENND3-215	ENST00000520986	DDB1	Q16531	1140 aa		32.48	■■■□□ 2.79
DENND3-215	ENST00000520986	SMG6	Q86US8	1419 aa	Known RBP	32.47	■■■□□ 2.79
DENND3-215	ENST00000520986	CCDC125	Q86Z20	511 aa		32.46	■■■□□ 2.79
DENND3-215	ENST00000520986	IL2RB	P14784	551 aa		32.44	■■■□□ 2.78
DENND3-215	ENST00000520986	NBPF6	Q5VWK0	638 aa		32.42	■■■□□ 2.78
DENND3-215	ENST00000520986	FAM196A	Q6ZSG2	479 aa		32.42	■■■□□ 2.78
DENND3-215	ENST00000520986	NBPF4	Q96M43	638 aa		32.42	■■■□□ 2.78
DENND3-215	ENST00000520986	CC2D1B	Q5T0F9	858 aa	Known RBP	32.41	■■■□□ 2.78
DENND3-215	ENST00000520986	TNS2	Q63HR2	1409 aa		32.41	■■■□□ 2.78
DENND3-215	ENST00000520986	NPC1L1	Q9UHC9	1359 aa		32.4	■■■□□ 2.78
DENND3-215	ENST00000520986	EXOC5	O00471	708 aa		32.39	■■■□□ 2.78
DENND3-215	ENST00000520986	RGPD1	P0DJD0	1748 aa		32.38	■■■□□ 2.77
DENND3-215	ENST00000520986	USHBP1	Q8N6Y0	703 aa		32.38	■■■□□ 2.77
DENND3-215	ENST00000520986	OVOS2	A0A0G2JMS6	1433 aa		32.37	■■■□□ 2.77
DENND3-215	ENST00000520986	MARCH10	Q8NA82	808 aa	Predicted RBP	32.37	■■■□□ 2.77
DENND3-215	ENST00000520986	TNS1	Q9HBL0	1735 aa	Known RBP	32.35	■■■□□ 2.77
DENND3-215	ENST00000520986	SF3B2	Q13435	895 aa	Known RBP	32.34	■■■□□ 2.77
DENND3-215	ENST00000520986	MEGF6	O75095	1541 aa		32.34	■■■□□ 2.77
DENND3-215	ENST00000520986	CNGB1	Q14028	1251 aa	Predicted RBP	32.33	■■■□□ 2.77
DENND3-215	ENST00000520986	TRIM37	O94972	964 aa		32.32	■■■□□ 2.76
DENND3-215	ENST00000520986	EIF4A2	Q14240	407 aa	Known RBP	32.32	■■■□□ 2.76
DENND3-215	ENST00000520986	DEFB132	Q7Z7B7	95 aa		32.31	■■■□□ 2.76
DENND3-215	ENST00000520986	NCAPD2	Q15021	1401 aa		32.31	■■■□□ 2.76
DENND3-215	ENST00000520986	SBF2	Q86WG5	1849 aa		32.3	■■■□□ 2.76
DENND3-215	ENST00000520986	BCL9	O00512	1426 aa		32.29	■■■□□ 2.76
DENND3-215	ENST00000520986	EYA1	Q99502	592 aa		32.29	■■■□□ 2.76
DENND3-215	ENST00000520986	SHANK3	Q9BYB0	1731 aa		32.28	■■■□□ 2.76
DENND3-215	ENST00000520986	RAPGEF4	Q8WZA2	1011 aa		32.26	■■■□□ 2.75
DENND3-215	ENST00000520986	MTHFS	P49914	203 aa		32.25	■■■□□ 2.75
DENND3-215	ENST00000520986	BAG6	P46379	1132 aa		32.24	■■■□□ 2.75
DENND3-215	ENST00000520986	TAT	P17735	454 aa	Predicted RBP	32.22	■■■□□ 2.75
DENND3-215	ENST00000520986	ZCRB1	Q8TBF4	217 aa	Known RBP	32.22	■■■□□ 2.75
DENND3-215	ENST00000520986	DDX54	Q8TDD1	881 aa	Known RBP	32.21	■■■□□ 2.75
DENND3-215	ENST00000520986	IGSF1	Q8N6C5	1336 aa		32.2	■■■□□ 2.74

Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms