RNA–Protein interactions for RNA: ENST00000519770.1

IGHV3-52-201, Transcript of immunoglobulin heavy variable 3-52 (pseudogene), humanhuman

BASIC

Gene IGHV3-52, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-52-201ENST00000519770 KIAA0232Q92628 1395 aa23.39■■□□□ 1.33
IGHV3-52-201ENST00000519770 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
IGHV3-52-201ENST00000519770 U2AF1Q01081 240 aaKnown RBP eCLIP23.38■■□□□ 1.33
IGHV3-52-201ENST00000519770 BLMP54132 1417 aaPredicted RBP23.37■■□□□ 1.33
IGHV3-52-201ENST00000519770 NUTM2BA6NNL0 878 aaPredicted RBP23.37■■□□□ 1.33
IGHV3-52-201ENST00000519770 NUTM2EB1AL46 878 aaPredicted RBP23.37■■□□□ 1.33
IGHV3-52-201ENST00000519770 NUTM2AQ8IVF1 878 aaPredicted RBP23.37■■□□□ 1.33
IGHV3-52-201ENST00000519770 CRYBG1Q9Y4K1 1723 aa23.36■■□□□ 1.33
IGHV3-52-201ENST00000519770 LTV1Q96GA3 475 aaPredicted RBP23.36■■□□□ 1.33
IGHV3-52-201ENST00000519770 SPATA31A6Q5VVP1 1343 aa23.35■■□□□ 1.33
IGHV3-52-201ENST00000519770 NEFMP07197 916 aa23.35■■□□□ 1.33
IGHV3-52-201ENST00000519770 SHPRHQ149N8 1683 aa23.35■■□□□ 1.33
IGHV3-52-201ENST00000519770 IL13P35225 146 aa23.34■■□□□ 1.33
IGHV3-52-201ENST00000519770 EIF4A2Q14240 407 aaKnown RBP23.34■■□□□ 1.33
IGHV3-52-201ENST00000519770 CHRNA2Q15822 529 aa23.34■■□□□ 1.33
IGHV3-52-201ENST00000519770 ABCC6O95255 1503 aa23.33■■□□□ 1.33
IGHV3-52-201ENST00000519770 ABCA3Q99758 1704 aa23.33■■□□□ 1.33
IGHV3-52-201ENST00000519770 PEAK1Q9H792 1746 aa23.33■■□□□ 1.33
IGHV3-52-201ENST00000519770 COL3A1P02461 1466 aaPredicted RBP23.33■■□□□ 1.33
IGHV3-52-201ENST00000519770 CSB-PGBD3P0DP91 1061 aa23.33■■□□□ 1.33
IGHV3-52-201ENST00000519770 ADAMTS8Q9UP79 889 aa23.33■■□□□ 1.33
IGHV3-52-201ENST00000519770 ADAMTS2O95450 1211 aa23.32■■□□□ 1.32
IGHV3-52-201ENST00000519770 FBXO41Q8TF61 875 aa23.32■■□□□ 1.32
IGHV3-52-201ENST00000519770 EVA1CP58658 441 aa23.31■■□□□ 1.32
IGHV3-52-201ENST00000519770 ANKRD24Q8TF21 1146 aa23.31■■□□□ 1.32
IGHV3-52-201ENST00000519770 YTHDC1Q96MU7 727 aaKnown RBP23.29■■□□□ 1.32
IGHV3-52-201ENST00000519770 FAM83GA6ND36 823 aa23.28■■□□□ 1.32
IGHV3-52-201ENST00000519770 FCHSD2O94868 740 aa23.28■■□□□ 1.32
IGHV3-52-201ENST00000519770 MEX3CQ5U5Q3 659 aaKnown RBP23.28■■□□□ 1.32
IGHV3-52-201ENST00000519770 AXIN2Q9Y2T1 843 aa23.27■■□□□ 1.32
IGHV3-52-201ENST00000519770 MAPK8IP3Q9UPT6 1336 aa23.27■■□□□ 1.32
IGHV3-52-201ENST00000519770 SULT6B1Q6IMI4 303 aa23.25■■□□□ 1.31
IGHV3-52-201ENST00000519770 NLRP2Q9NX02 1062 aa23.25■■□□□ 1.31
IGHV3-52-201ENST00000519770 ERBB3P21860 1342 aa23.25■■□□□ 1.31
IGHV3-52-201ENST00000519770 COL14A1Q05707 1796 aaKnown RBP23.24■■□□□ 1.31
IGHV3-52-201ENST00000519770 HMOX1P09601 288 aa23.24■■□□□ 1.31
IGHV3-52-201ENST00000519770 RUNDC1Q96C34 613 aa23.24■■□□□ 1.31
IGHV3-52-201ENST00000519770 EYA1Q99502 592 aa23.24■■□□□ 1.31
IGHV3-52-201ENST00000519770 BTG4Q9NY30 223 aa23.24■■□□□ 1.31
IGHV3-52-201ENST00000519770 HNRNPUQ00839 825 aaKnown RBP eCLIP23.23■■□□□ 1.31
IGHV3-52-201ENST00000519770 STRN4Q9NRL3 753 aa23.23■■□□□ 1.31
IGHV3-52-201ENST00000519770 COL18A1P39060 1754 aa23.22■■□□□ 1.31
IGHV3-52-201ENST00000519770 TOM1L2Q6ZVM7 507 aa23.22■■□□□ 1.31
IGHV3-52-201ENST00000519770 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
IGHV3-52-201ENST00000519770 NGLY1Q96IV0 654 aa23.22■■□□□ 1.31
IGHV3-52-201ENST00000519770 IGSF1Q8N6C5 1336 aa23.22■■□□□ 1.31
IGHV3-52-201ENST00000519770 WDR17Q8IZU2 1322 aa23.2■■□□□ 1.3
IGHV3-52-201ENST00000519770 PRKAR2BP31323 418 aa23.2■■□□□ 1.3
IGHV3-52-201ENST00000519770 C8orf37Q96NL8 207 aa23.2■■□□□ 1.3
IGHV3-52-201ENST00000519770 RGPD5Q99666 1765 aa23.19■■□□□ 1.3
IGHV3-52-201ENST00000519770 NBPF6Q5VWK0 638 aa23.19■■□□□ 1.3
IGHV3-52-201ENST00000519770 NBPF4Q96M43 638 aa23.19■■□□□ 1.3
IGHV3-52-201ENST00000519770 RSPH6AQ9H0K4 717 aa23.19■■□□□ 1.3
IGHV3-52-201ENST00000519770 CAMTA1Q9Y6Y1 1673 aa23.19■■□□□ 1.3
IGHV3-52-201ENST00000519770 LMO7Q8WWI1 1683 aa23.18■■□□□ 1.3
IGHV3-52-201ENST00000519770 FAM208AQ9UK61 1670 aaKnown RBP23.18■■□□□ 1.3
IGHV3-52-201ENST00000519770 COL5A2P05997 1499 aaPredicted RBP23.17■■□□□ 1.3
IGHV3-52-201ENST00000519770 NGEFQ8N5V2 710 aa23.17■■□□□ 1.3
IGHV3-52-201ENST00000519770 AEBP1Q8IUX7 1158 aa23.16■■□□□ 1.3
IGHV3-52-201ENST00000519770 USHBP1Q8N6Y0 703 aa23.16■■□□□ 1.3
IGHV3-52-201ENST00000519770 RAPGEF4Q8WZA2 1011 aa23.16■■□□□ 1.3
IGHV3-52-201ENST00000519770 APAF1O14727 1248 aa23.15■■□□□ 1.3
IGHV3-52-201ENST00000519770 RGPD1P0DJD0 1748 aa23.15■■□□□ 1.3
IGHV3-52-201ENST00000519770 KDRP35968 1356 aa23.14■■□□□ 1.3
IGHV3-52-201ENST00000519770 CARD10Q9BWT7 1032 aa23.14■■□□□ 1.29
IGHV3-52-201ENST00000519770 LARP1Q6PKG0 1096 aaKnown RBP23.13■■□□□ 1.29
IGHV3-52-201ENST00000519770 TCP11L2Q8N4U5 519 aa23.13■■□□□ 1.29
IGHV3-52-201ENST00000519770 PLEKHF1Q96S99 279 aa23.13■■□□□ 1.29
IGHV3-52-201ENST00000519770 CCDC9Q9Y3X0 531 aaKnown RBP23.13■■□□□ 1.29
IGHV3-52-201ENST00000519770 TATP17735 454 aaPredicted RBP23.12■■□□□ 1.29
IGHV3-52-201ENST00000519770 CRB1P82279 1406 aa23.12■■□□□ 1.29
IGHV3-52-201ENST00000519770 UNC5CLQ8IV45 518 aa23.12■■□□□ 1.29
IGHV3-52-201ENST00000519770 PLCH1Q4KWH8 1693 aa23.12■■□□□ 1.29
IGHV3-52-201ENST00000519770 PLEKHO1Q53GL0 409 aaPredicted RBP23.11■■□□□ 1.29
IGHV3-52-201ENST00000519770 LRP6O75581 1613 aa23.11■■□□□ 1.29
IGHV3-52-201ENST00000519770 NWD2Q9ULI1 1742 aa23.11■■□□□ 1.29
IGHV3-52-201ENST00000519770 NEUROD2Q15784 382 aa23.1■■□□□ 1.29
IGHV3-52-201ENST00000519770 AMOTQ4VCS5 1084 aa23.1■■□□□ 1.29
IGHV3-52-201ENST00000519770 GAS2L2Q8NHY3 880 aa23.1■■□□□ 1.29
IGHV3-52-201ENST00000519770 USP21Q9UK80 565 aa23.1■■□□□ 1.29
IGHV3-52-201ENST00000519770 SALL2Q9Y467 1007 aaPredicted RBP23.1■■□□□ 1.29
IGHV3-52-201ENST00000519770 SLIT2O94813 1529 aa23.09■■□□□ 1.29
IGHV3-52-201ENST00000519770 FNBP4Q8N3X1 1017 aaPredicted RBP23.09■■□□□ 1.29
IGHV3-52-201ENST00000519770 USP35Q9P2H5 1018 aa23.09■■□□□ 1.29
IGHV3-52-201ENST00000519770 LMOD3Q0VAK6 560 aa23.08■■□□□ 1.29
IGHV3-52-201ENST00000519770 NFE2L2Q16236 605 aa23.08■■□□□ 1.29
IGHV3-52-201ENST00000519770 RGPD2P0DJD1 1756 aa23.08■■□□□ 1.29
IGHV3-52-201ENST00000519770 NCAPD2Q15021 1401 aa23.08■■□□□ 1.28
IGHV3-52-201ENST00000519770 TMPOP42166 694 aaKnown RBP23.07■■□□□ 1.28
IGHV3-52-201ENST00000519770 RIPK4P57078 832 aa23.07■■□□□ 1.28
IGHV3-52-201ENST00000519770 NCBP3Q53F19 620 aaKnown RBP23.07■■□□□ 1.28
IGHV3-52-201ENST00000519770 PHACTR3Q96KR7 559 aa23.07■■□□□ 1.28
IGHV3-52-201ENST00000519770 ZBED9Q6R2W3 1325 aa23.07■■□□□ 1.28
IGHV3-52-201ENST00000519770 SENP3-EIF4A1A0A087X0R7 540 aa23.06■■□□□ 1.28
IGHV3-52-201ENST00000519770 IL2RBP14784 551 aa23.06■■□□□ 1.28
IGHV3-52-201ENST00000519770 SPG7Q9UQ90 795 aa23.06■■□□□ 1.28
IGHV3-52-201ENST00000519770 RRP7AQ9Y3A4 280 aaKnown RBP23.06■■□□□ 1.28
IGHV3-52-201ENST00000519770 AFF2P51816 1311 aa23.06■■□□□ 1.28
IGHV3-52-201ENST00000519770 PLEKHG2Q9H7P9 1386 aa23.05■■□□□ 1.28
IGHV3-52-201ENST00000519770 THRAP3Q9Y2W1 955 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.7 ms