RNA–Protein interactions for RNA: ENST00000518557.5

LINC00599-202, long intergenic non-protein coding RNA 599, humanhuman

TSL 1 (best)

Gene LINC00599, Length 869 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00599-202ENST00000518557 TCP11L2Q8N4U5 519 aa13.61□□□□□ -0.23
LINC00599-202ENST00000518557 ZRANB1Q9UGI0 708 aa13.61□□□□□ -0.23
LINC00599-202ENST00000518557 COL18A1P39060 1754 aa13.6□□□□□ -0.23
LINC00599-202ENST00000518557 NFAT5O94916 1531 aa13.6□□□□□ -0.23
LINC00599-202ENST00000518557 CRB1P82279 1406 aa13.6□□□□□ -0.23
LINC00599-202ENST00000518557 USP54Q70EL1 1684 aa13.59□□□□□ -0.23
LINC00599-202ENST00000518557 ABCC6O95255 1503 aa13.59□□□□□ -0.23
LINC00599-202ENST00000518557 KTN1Q86UP2 1357 aaKnown RBP13.59□□□□□ -0.23
LINC00599-202ENST00000518557 MON2Q7Z3U7 1717 aa13.59□□□□□ -0.23
LINC00599-202ENST00000518557 SRCAPQ6ZRS2 3230 aa13.59□□□□□ -0.23
LINC00599-202ENST00000518557 EVA1CP58658 441 aa13.59□□□□□ -0.23
LINC00599-202ENST00000518557 KCNH5Q8NCM2 988 aa13.59□□□□□ -0.23
LINC00599-202ENST00000518557 AXIN2Q9Y2T1 843 aa13.59□□□□□ -0.23
LINC00599-202ENST00000518557 A0A0G2JS52 829 aa13.58□□□□□ -0.24
LINC00599-202ENST00000518557 MYT1Q01538 1121 aa13.58□□□□□ -0.24
LINC00599-202ENST00000518557 SF3B2Q13435 895 aaKnown RBP13.58□□□□□ -0.24
LINC00599-202ENST00000518557 FAM182BQ5T319 152 aa13.58□□□□□ -0.24
LINC00599-202ENST00000518557 FAM196AQ6ZSG2 479 aa13.57□□□□□ -0.24
LINC00599-202ENST00000518557 USP35Q9P2H5 1018 aa13.57□□□□□ -0.24
LINC00599-202ENST00000518557 WDR17Q8IZU2 1322 aa13.57□□□□□ -0.24
LINC00599-202ENST00000518557 A0A1W2PP64 1363 aa13.57□□□□□ -0.24
LINC00599-202ENST00000518557 NINLQ9Y2I6 1382 aa13.57□□□□□ -0.24
LINC00599-202ENST00000518557 EDC4Q6P2E9 1401 aaKnown RBP13.56□□□□□ -0.24
LINC00599-202ENST00000518557 ST20-MTHFSA0A0A6YYL1 179 aa13.56□□□□□ -0.24
LINC00599-202ENST00000518557 ATXN8OSP0DMR3 200 aa13.56□□□□□ -0.24
LINC00599-202ENST00000518557 BAG6P46379 1132 aa13.56□□□□□ -0.24
LINC00599-202ENST00000518557 SLC12A5Q9H2X9 1139 aa13.56□□□□□ -0.24
LINC00599-202ENST00000518557 RGPD1P0DJD0 1748 aa13.56□□□□□ -0.24
LINC00599-202ENST00000518557 TNS1Q9HBL0 1735 aaKnown RBP13.56□□□□□ -0.24
LINC00599-202ENST00000518557 PARP4Q9UKK3 1724 aaKnown RBP13.56□□□□□ -0.24
LINC00599-202ENST00000518557 SLC24A1O60721 1099 aa13.55□□□□□ -0.24
LINC00599-202ENST00000518557 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
LINC00599-202ENST00000518557 CLSPNQ9HAW4 1339 aa13.55□□□□□ -0.24
LINC00599-202ENST00000518557 OVOS2A0A0J9YW53 1432 aa13.55□□□□□ -0.24
LINC00599-202ENST00000518557 BCL9O00512 1426 aa13.55□□□□□ -0.24
LINC00599-202ENST00000518557 OVOS2Q6IE36 1432 aa13.55□□□□□ -0.24
LINC00599-202ENST00000518557 CAMKK2Q96RR4 588 aa13.54□□□□□ -0.24
LINC00599-202ENST00000518557 PARD3Q8TEW0 1356 aa13.54□□□□□ -0.24
LINC00599-202ENST00000518557 EN1Q05925 392 aaPredicted RBP13.53□□□□□ -0.24
LINC00599-202ENST00000518557 NME9Q86XW9 330 aa13.53□□□□□ -0.24
LINC00599-202ENST00000518557 PEAK1Q9H792 1746 aa13.53□□□□□ -0.24
LINC00599-202ENST00000518557 C11orf95C9JLR9 678 aaPredicted RBP13.52□□□□□ -0.25
LINC00599-202ENST00000518557 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
LINC00599-202ENST00000518557 HDGFL2Q7Z4V5 671 aaPredicted RBP13.52□□□□□ -0.25
LINC00599-202ENST00000518557 CDCA7Q9BWT1 371 aaPredicted RBP13.52□□□□□ -0.25
LINC00599-202ENST00000518557 CARD10Q9BWT7 1032 aa13.52□□□□□ -0.25
LINC00599-202ENST00000518557 TERF2IPQ9NYB0 399 aa13.52□□□□□ -0.25
LINC00599-202ENST00000518557 LRRC37A3O60309 1634 aa13.52□□□□□ -0.25
LINC00599-202ENST00000518557 USP47Q96K76 1375 aa13.51□□□□□ -0.25
LINC00599-202ENST00000518557 TRIM37O94972 964 aa13.51□□□□□ -0.25
LINC00599-202ENST00000518557 TOM1L2Q6ZVM7 507 aa13.51□□□□□ -0.25
LINC00599-202ENST00000518557 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.51□□□□□ -0.25
LINC00599-202ENST00000518557 TMC1Q8TDI8 760 aa13.51□□□□□ -0.25
LINC00599-202ENST00000518557 OVOS2A0A0G2JMS6 1433 aa13.5□□□□□ -0.25
LINC00599-202ENST00000518557 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
LINC00599-202ENST00000518557 ERBB3P21860 1342 aa13.5□□□□□ -0.25
LINC00599-202ENST00000518557 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
LINC00599-202ENST00000518557 EZH2Q15910 746 aaKnown RBP13.49□□□□□ -0.25
LINC00599-202ENST00000518557 ZBTB7CA1YPR0 619 aa13.48□□□□□ -0.25
LINC00599-202ENST00000518557 DDB1Q16531 1140 aa13.48□□□□□ -0.25
LINC00599-202ENST00000518557 LRP5O75197 1615 aa13.47□□□□□ -0.25
LINC00599-202ENST00000518557 SOX12O15370 315 aa13.47□□□□□ -0.25
LINC00599-202ENST00000518557 APBA3O96018 575 aa13.47□□□□□ -0.25
LINC00599-202ENST00000518557 MARCH10Q8NA82 808 aaPredicted RBP13.47□□□□□ -0.25
LINC00599-202ENST00000518557 WNK3Q9BYP7 1800 aa13.47□□□□□ -0.25
LINC00599-202ENST00000518557 TMF1P82094 1093 aa13.46□□□□□ -0.25
LINC00599-202ENST00000518557 RREB1Q92766 1687 aa13.46□□□□□ -0.26
LINC00599-202ENST00000518557 ATF5Q9Y2D1 282 aaPredicted RBP13.45□□□□□ -0.26
LINC00599-202ENST00000518557 TNS2Q63HR2 1409 aa13.45□□□□□ -0.26
LINC00599-202ENST00000518557 PLSCR1O15162 318 aa13.44□□□□□ -0.26
LINC00599-202ENST00000518557 CSB-PGBD3P0DP91 1061 aa13.44□□□□□ -0.26
LINC00599-202ENST00000518557 IP6K1Q92551 441 aa13.44□□□□□ -0.26
LINC00599-202ENST00000518557 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
LINC00599-202ENST00000518557 RGPD3A6NKT7 1758 aaPredicted RBP13.43□□□□□ -0.26
LINC00599-202ENST00000518557 RGPD4Q7Z3J3 1758 aa13.43□□□□□ -0.26
LINC00599-202ENST00000518557 RGPD5Q99666 1765 aa13.43□□□□□ -0.26
LINC00599-202ENST00000518557 PSDA5PKW4 1024 aaPredicted RBP13.43□□□□□ -0.26
LINC00599-202ENST00000518557 FYB1O15117 783 aa13.42□□□□□ -0.26
LINC00599-202ENST00000518557 CDCA8Q53HL2 280 aa13.42□□□□□ -0.26
LINC00599-202ENST00000518557 PTF1AQ7RTS3 328 aa13.42□□□□□ -0.26
LINC00599-202ENST00000518557 ANKRD24Q8TF21 1146 aa13.42□□□□□ -0.26
LINC00599-202ENST00000518557 NUP188Q5SRE5 1749 aa13.42□□□□□ -0.26
LINC00599-202ENST00000518557 MAP3K19Q56UN5 1328 aa13.41□□□□□ -0.26
LINC00599-202ENST00000518557 LTN1O94822 1766 aa13.41□□□□□ -0.26
LINC00599-202ENST00000518557 EXOC5O00471 708 aa13.41□□□□□ -0.26
LINC00599-202ENST00000518557 R3HDM1Q15032 1099 aaKnown RBP13.41□□□□□ -0.26
LINC00599-202ENST00000518557 COG3Q96JB2 828 aa13.41□□□□□ -0.26
LINC00599-202ENST00000518557 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
LINC00599-202ENST00000518557 RTL1A6NKG5 1358 aa13.41□□□□□ -0.26
LINC00599-202ENST00000518557 IL2RBP14784 551 aa13.4□□□□□ -0.26
LINC00599-202ENST00000518557 HOXC9P31274 260 aa13.4□□□□□ -0.26
LINC00599-202ENST00000518557 PROM2Q8N271 834 aa13.4□□□□□ -0.26
LINC00599-202ENST00000518557 SBF2Q86WG5 1849 aa13.39□□□□□ -0.27
LINC00599-202ENST00000518557 CARD14Q9BXL6 1004 aa13.39□□□□□ -0.27
LINC00599-202ENST00000518557 NLRP2Q9NX02 1062 aa13.39□□□□□ -0.27
LINC00599-202ENST00000518557 MYOM1P52179 1685 aa13.38□□□□□ -0.27
LINC00599-202ENST00000518557 KIF24Q5T7B8 1368 aa13.38□□□□□ -0.27
LINC00599-202ENST00000518557 FBLN1P23142 703 aa13.38□□□□□ -0.27
LINC00599-202ENST00000518557 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
LINC00599-202ENST00000518557 FAM208AQ9UK61 1670 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms