RNA–Protein interactions for RNA: ENST00000518081.1

EFCAB13-204, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-204ENST00000518081 CDV3Q9UKY7 258 aaKnown RBP12.06□□□□□ -0.48
EFCAB13-204ENST00000518081 MAFBQ9Y5Q3 323 aaPredicted RBP12.06□□□□□ -0.48
EFCAB13-204ENST00000518081 TSGA10IPQ3SY00 556 aa12.05□□□□□ -0.48
EFCAB13-204ENST00000518081 ZNF697Q5TEC3 545 aa12.05□□□□□ -0.48
EFCAB13-204ENST00000518081 V9GY48 417 aaPredicted RBP12.05□□□□□ -0.48
EFCAB13-204ENST00000518081 ESPNB1AK53 854 aa12.04□□□□□ -0.48
EFCAB13-204ENST00000518081 NBPF20Q3BBV1 942 aa12.04□□□□□ -0.48
EFCAB13-204ENST00000518081 MRGPRX2Q96LB1 330 aa12.04□□□□□ -0.48
EFCAB13-204ENST00000518081 CDK15Q96Q40 435 aa12.04□□□□□ -0.48
EFCAB13-204ENST00000518081 KCTD15Q96SI1 283 aaPredicted RBP12.04□□□□□ -0.48
EFCAB13-204ENST00000518081 CHIC2Q9UKJ5 165 aa12.04□□□□□ -0.48
EFCAB13-204ENST00000518081 MAP4K5Q9Y4K4 846 aa12.04□□□□□ -0.48
EFCAB13-204ENST00000518081 SRPK2P78362 688 aaKnown RBP12.03□□□□□ -0.48
EFCAB13-204ENST00000518081 ARID5BQ14865 1188 aa12.03□□□□□ -0.48
EFCAB13-204ENST00000518081 VASH1Q7L8A9 365 aaPredicted RBP12.03□□□□□ -0.48
EFCAB13-204ENST00000518081 MPNDQ8N594 471 aa12.03□□□□□ -0.48
EFCAB13-204ENST00000518081 RNF20Q5VTR2 975 aa12.02□□□□□ -0.49
EFCAB13-204ENST00000518081 PLPP7Q8NBV4 271 aa12.02□□□□□ -0.49
EFCAB13-204ENST00000518081 CCDC85AQ96PX6 553 aaPredicted RBP12.02□□□□□ -0.49
EFCAB13-204ENST00000518081 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.01□□□□□ -0.49
EFCAB13-204ENST00000518081 USP17L5A8MUK1 530 aa12.01□□□□□ -0.49
EFCAB13-204ENST00000518081 HOMEZQ8IX15 550 aa12.01□□□□□ -0.49
EFCAB13-204ENST00000518081 PKD2L1Q9P0L9 805 aa12.01□□□□□ -0.49
EFCAB13-204ENST00000518081 TLL2Q9Y6L7 1015 aa12.01□□□□□ -0.49
EFCAB13-204ENST00000518081 GRM5P41594 1212 aa12□□□□□ -0.49
EFCAB13-204ENST00000518081 FOXC1Q12948 553 aa12□□□□□ -0.49
EFCAB13-204ENST00000518081 TRAF7Q6Q0C0 670 aa12□□□□□ -0.49
EFCAB13-204ENST00000518081 SEPT12Q8IYM1 358 aa12□□□□□ -0.49
EFCAB13-204ENST00000518081 DEPDC4Q8N2C3 294 aa12□□□□□ -0.49
EFCAB13-204ENST00000518081 USP17L3A6NCW0 530 aa11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 USP17L4A6NCW7 530 aa11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 PPP1R15AO75807 674 aaPredicted RBP11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 MAP7D1Q3KQU3 841 aa11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 USP17L2Q6R6M4 530 aa11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 USP17L1Q7RTZ2 530 aa11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 PLEKHM2Q8IWE5 1019 aa11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 PBXIP1Q96AQ6 731 aa11.99□□□□□ -0.49
EFCAB13-204ENST00000518081 RAB15P59190 212 aa11.98□□□□□ -0.49
EFCAB13-204ENST00000518081 CDCA8Q53HL2 280 aa11.98□□□□□ -0.49
EFCAB13-204ENST00000518081 INTS6LQ5JSJ4 861 aaKnown RBP11.98□□□□□ -0.49
EFCAB13-204ENST00000518081 NCOA4Q13772 614 aa11.97□□□□□ -0.49
EFCAB13-204ENST00000518081 KANK4Q5T7N3 995 aaPredicted RBP11.97□□□□□ -0.49
EFCAB13-204ENST00000518081 DOLKQ9UPQ8 538 aa11.97□□□□□ -0.49
EFCAB13-204ENST00000518081 LZTS3O60299 673 aaPredicted RBP11.96□□□□□ -0.49
EFCAB13-204ENST00000518081 GDF9O60383 454 aa11.96□□□□□ -0.49
EFCAB13-204ENST00000518081 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
EFCAB13-204ENST00000518081 CDCA7Q9BWT1 371 aaPredicted RBP11.96□□□□□ -0.49
EFCAB13-204ENST00000518081 VRTNQ9H8Y1 702 aa11.96□□□□□ -0.49
EFCAB13-204ENST00000518081 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
EFCAB13-204ENST00000518081 ADH1CP00326 375 aa11.95□□□□□ -0.5
EFCAB13-204ENST00000518081 PCDHB11Q9Y5F2 797 aa11.95□□□□□ -0.5
EFCAB13-204ENST00000518081 ERVH48-1M5A8F1 160 aa11.94□□□□□ -0.5
EFCAB13-204ENST00000518081 FSHRP23945 695 aa11.94□□□□□ -0.5
EFCAB13-204ENST00000518081 MKRN1Q9UHC7 482 aaKnown RBP11.94□□□□□ -0.5
EFCAB13-204ENST00000518081 ALDH1A1P00352 501 aa11.93□□□□□ -0.5
EFCAB13-204ENST00000518081 NR5A1Q13285 461 aa11.93□□□□□ -0.5
EFCAB13-204ENST00000518081 EML3Q32P44 896 aa11.93□□□□□ -0.5
EFCAB13-204ENST00000518081 OXLD1Q5BKU9 147 aa11.93□□□□□ -0.5
EFCAB13-204ENST00000518081 SNIP1Q8TAD8 396 aaKnown RBP11.93□□□□□ -0.5
EFCAB13-204ENST00000518081 TNFRSF10AO00220 468 aa11.9□□□□□ -0.5
EFCAB13-204ENST00000518081 DHX9Q08211 1270 aaKnown RBP11.9□□□□□ -0.5
EFCAB13-204ENST00000518081 TRIM67Q6ZTA4 783 aa11.9□□□□□ -0.5
EFCAB13-204ENST00000518081 TMPRSS4Q9NRS4 437 aa11.9□□□□□ -0.5
EFCAB13-204ENST00000518081 NOD1Q9Y239 953 aa11.9□□□□□ -0.5
EFCAB13-204ENST00000518081 RGS20O76081 388 aa11.89□□□□□ -0.51
EFCAB13-204ENST00000518081 ATG7O95352 703 aa11.89□□□□□ -0.51
EFCAB13-204ENST00000518081 NR3C2P08235 984 aa11.89□□□□□ -0.51
EFCAB13-204ENST00000518081 USP4Q13107 963 aa11.89□□□□□ -0.51
EFCAB13-204ENST00000518081 CCDC116Q8IYX3 515 aa11.89□□□□□ -0.51
EFCAB13-204ENST00000518081 CYP4X1Q8N118 509 aa11.89□□□□□ -0.51
EFCAB13-204ENST00000518081 TTC24A2A3L6 582 aaPredicted RBP11.88□□□□□ -0.51
EFCAB13-204ENST00000518081 ATP5J2-PTCD1G3V325 749 aa11.88□□□□□ -0.51
EFCAB13-204ENST00000518081 J3QL48 77 aa11.88□□□□□ -0.51
EFCAB13-204ENST00000518081 PPP1R26Q5T8A7 1209 aaPredicted RBP11.88□□□□□ -0.51
EFCAB13-204ENST00000518081 TOR4AQ9NXH8 423 aa11.88□□□□□ -0.51
EFCAB13-204ENST00000518081 WASF2Q9Y6W5 498 aa11.88□□□□□ -0.51
EFCAB13-204ENST00000518081 SIRT1Q96EB6 747 aa11.87□□□□□ -0.51
EFCAB13-204ENST00000518081 RASA1P20936 1047 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 SCTRP47872 440 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 PRR20EP86478 221 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 PRR20CP86479 221 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 PRR20DP86480 221 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 PRR20BP86481 221 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 PRR20AP86496 221 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 NNTQ13423 1086 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 CRTC2Q53ET0 693 aaPredicted RBP11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 TRIM50Q86XT4 487 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
EFCAB13-204ENST00000518081 ERVK-9P63128 1117 aa11.85□□□□□ -0.51
EFCAB13-204ENST00000518081 LARP1Q6PKG0 1096 aaKnown RBP11.85□□□□□ -0.51
EFCAB13-204ENST00000518081 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 GTF2IP78347 998 aa11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 CLDN10P78369 228 aa11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 PTK7Q13308 1070 aa11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 CC2D2BQ6DHV5 1058 aa11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 OGFOD1Q8N543 542 aa11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 ZNF784Q8NCA9 323 aaPredicted RBP11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 CYLDQ9NQC7 956 aa11.84□□□□□ -0.51
EFCAB13-204ENST00000518081 PCDHGA11Q9Y5H2 935 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms