RNA–Protein interactions for RNA: ENST00000518081.1

EFCAB13-204, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-204ENST00000518081 AEBP2Q6ZN18 517 aaPredicted RBP30.45■■■□□ 2.47
EFCAB13-204ENST00000518081 CHIC1Q5VXU3 224 aa30.08■■■□□ 2.41
EFCAB13-204ENST00000518081 PHF23Q9BUL5 403 aaPredicted RBP26.54■■□□□ 1.84
EFCAB13-204ENST00000518081 SENP3Q9H4L4 574 aaPredicted RBP25.72■■□□□ 1.71
EFCAB13-204ENST00000518081 PLPPR3Q6T4P5 718 aa24.57■■□□□ 1.52
EFCAB13-204ENST00000518081 FOXD1Q16676 465 aa23.87■■□□□ 1.41
EFCAB13-204ENST00000518081 PPP6R1Q9UPN7 881 aa23.3■■□□□ 1.32
EFCAB13-204ENST00000518081 ADRA2BP18089 450 aa23.29■■□□□ 1.32
EFCAB13-204ENST00000518081 PIAS4Q8N2W9 510 aaPredicted RBP22.57■■□□□ 1.2
EFCAB13-204ENST00000518081 MSH5O43196 834 aa21.82■■□□□ 1.08
EFCAB13-204ENST00000518081 PPP4R3CPQ6ZMV5 832 aa21.73■■□□□ 1.07
EFCAB13-204ENST00000518081 KCNA4P22459 653 aa21.66■■□□□ 1.06
EFCAB13-204ENST00000518081 SCAF1Q9H7N4 1312 aaKnown RBP21.25■□□□□ 0.99
EFCAB13-204ENST00000518081 NCBP3Q53F19 620 aaKnown RBP21.24■□□□□ 0.99
EFCAB13-204ENST00000518081 MAPK8IP2Q13387 824 aaPredicted RBP21.03■□□□□ 0.96
EFCAB13-204ENST00000518081 CNKSR2Q8WXI2 1034 aa21.02■□□□□ 0.96
EFCAB13-204ENST00000518081 NPM3O75607 178 aaKnown RBP20.96■□□□□ 0.95
EFCAB13-204ENST00000518081 SLC4A1APQ9BWU0 796 aaKnown RBP20.67■□□□□ 0.9
EFCAB13-204ENST00000518081 DMRT2Q9Y5R5 561 aa20.62■□□□□ 0.89
EFCAB13-204ENST00000518081 EHMT2Q96KQ7 1210 aa20.52■□□□□ 0.88
EFCAB13-204ENST00000518081 RNF216Q9NWF9 866 aaPredicted RBP20.51■□□□□ 0.87
EFCAB13-204ENST00000518081 HOXD11P31277 338 aaPredicted RBP20.34■□□□□ 0.85
EFCAB13-204ENST00000518081 DNAJC5BQ9UF47 199 aa20.27■□□□□ 0.84
EFCAB13-204ENST00000518081 CSRNP3Q8WYN3 585 aa20.15■□□□□ 0.82
EFCAB13-204ENST00000518081 ZBTB22O15209 634 aa19.94■□□□□ 0.78
EFCAB13-204ENST00000518081 FOXD4L1Q9NU39 408 aa19.8■□□□□ 0.76
EFCAB13-204ENST00000518081 SLC4A2P04920 1241 aa19.72■□□□□ 0.75
EFCAB13-204ENST00000518081 DCAF8L1A6NGE4 600 aa19.7■□□□□ 0.74
EFCAB13-204ENST00000518081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.38■□□□□ 0.69
EFCAB13-204ENST00000518081 MYCNP04198 464 aaPredicted RBP19.32■□□□□ 0.68
EFCAB13-204ENST00000518081 POTEDQ86YR6 584 aa19.24■□□□□ 0.67
EFCAB13-204ENST00000518081 U3KPZ7 1027 aaPredicted RBP19.12■□□□□ 0.65
EFCAB13-204ENST00000518081 ATXN8OSP0DMR3 200 aa19.07■□□□□ 0.64
EFCAB13-204ENST00000518081 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.96■□□□□ 0.63
EFCAB13-204ENST00000518081 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
EFCAB13-204ENST00000518081 SAMD1Q6SPF0 538 aaPredicted RBP18.92■□□□□ 0.62
EFCAB13-204ENST00000518081 ATF5Q9Y2D1 282 aaPredicted RBP18.84■□□□□ 0.61
EFCAB13-204ENST00000518081 RNF39Q9H2S5 420 aa18.75■□□□□ 0.59
EFCAB13-204ENST00000518081 APLP2Q06481 763 aa18.66■□□□□ 0.58
EFCAB13-204ENST00000518081 C1QBPQ07021 282 aaKnown RBP18.54■□□□□ 0.56
EFCAB13-204ENST00000518081 SPINK5Q9NQ38 1064 aaPredicted RBP18.49■□□□□ 0.55
EFCAB13-204ENST00000518081 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
EFCAB13-204ENST00000518081 TRHP20396 242 aaPredicted RBP18.38■□□□□ 0.53
EFCAB13-204ENST00000518081 CAPN15O75808 1086 aa18.37■□□□□ 0.53
EFCAB13-204ENST00000518081 POLA2Q14181 598 aa18.18■□□□□ 0.5
EFCAB13-204ENST00000518081 FKBP8Q14318 412 aa18.16■□□□□ 0.5
EFCAB13-204ENST00000518081 ABCB7O75027 752 aa18.06■□□□□ 0.48
EFCAB13-204ENST00000518081 MKRN4PQ13434 485 aaPredicted RBP18.03■□□□□ 0.48
EFCAB13-204ENST00000518081 DSG3P32926 999 aa17.99■□□□□ 0.47
EFCAB13-204ENST00000518081 CACNB1Q02641 598 aaPredicted RBP17.99■□□□□ 0.47
EFCAB13-204ENST00000518081 FBLN2P98095 1184 aa17.96■□□□□ 0.47
EFCAB13-204ENST00000518081 ZBTB12Q9Y330 459 aaPredicted RBP17.85■□□□□ 0.45
EFCAB13-204ENST00000518081 SPDYE4A6NLX3 237 aa17.78■□□□□ 0.44
EFCAB13-204ENST00000518081 PROM2Q8N271 834 aa17.55■□□□□ 0.4
EFCAB13-204ENST00000518081 OSCARQ8IYS5 282 aa17.53■□□□□ 0.4
EFCAB13-204ENST00000518081 ZNF692Q9BU19 519 aaPredicted RBP17.44■□□□□ 0.38
EFCAB13-204ENST00000518081 SPDYE2BA6NHP3 402 aa17.43■□□□□ 0.38
EFCAB13-204ENST00000518081 SPDYE6P0CI01 402 aa17.43■□□□□ 0.38
EFCAB13-204ENST00000518081 SPDYE2Q495Y8 402 aa17.43■□□□□ 0.38
EFCAB13-204ENST00000518081 FBXO3Q9UK99 471 aa17.38■□□□□ 0.37
EFCAB13-204ENST00000518081 SSUH2Q9Y2M2 353 aa17.35■□□□□ 0.37
EFCAB13-204ENST00000518081 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
EFCAB13-204ENST00000518081 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
EFCAB13-204ENST00000518081 RTN4Q9NQC3 1192 aaKnown RBP17.18■□□□□ 0.34
EFCAB13-204ENST00000518081 VASPP50552 380 aaPredicted RBP17.15■□□□□ 0.34
EFCAB13-204ENST00000518081 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
EFCAB13-204ENST00000518081 STAG3Q9UJ98 1225 aa17.03■□□□□ 0.32
EFCAB13-204ENST00000518081 AKT1S1Q96B36 256 aa16.99■□□□□ 0.31
EFCAB13-204ENST00000518081 IFNLR1Q8IU57 520 aaPredicted RBP16.98■□□□□ 0.31
EFCAB13-204ENST00000518081 REM2Q8IYK8 340 aaPredicted RBP16.84■□□□□ 0.29
EFCAB13-204ENST00000518081 MIER1Q8N108 512 aa16.83■□□□□ 0.28
EFCAB13-204ENST00000518081 PLCD3Q8N3E9 789 aa16.83■□□□□ 0.28
EFCAB13-204ENST00000518081 SPDYE1Q8NFV5 336 aaPredicted RBP16.83■□□□□ 0.28
EFCAB13-204ENST00000518081 KLHL34Q8N239 644 aa16.78■□□□□ 0.28
EFCAB13-204ENST00000518081 CLEC11AQ9Y240 323 aa16.74■□□□□ 0.27
EFCAB13-204ENST00000518081 SPOCK2Q92563 424 aa16.69■□□□□ 0.26
EFCAB13-204ENST00000518081 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
EFCAB13-204ENST00000518081 PRR29P0C7W0 189 aa16.65■□□□□ 0.26
EFCAB13-204ENST00000518081 PITPNM1O00562 1244 aa16.63■□□□□ 0.25
EFCAB13-204ENST00000518081 ZBTB47Q9UFB7 747 aaPredicted RBP16.59■□□□□ 0.25
EFCAB13-204ENST00000518081 PKD2Q13563 968 aa16.56■□□□□ 0.24
EFCAB13-204ENST00000518081 CREBZFQ9NS37 354 aa16.55■□□□□ 0.24
EFCAB13-204ENST00000518081 MNX1P50219 401 aaPredicted RBP16.42■□□□□ 0.22
EFCAB13-204ENST00000518081 NUBP1P53384 320 aa16.38■□□□□ 0.21
EFCAB13-204ENST00000518081 CIZ1Q9ULV3 898 aaPredicted RBP16.37■□□□□ 0.21
EFCAB13-204ENST00000518081 ECM2O94769 699 aaPredicted RBP16.36■□□□□ 0.21
EFCAB13-204ENST00000518081 CHADLQ6NUI6 762 aa16.32■□□□□ 0.2
EFCAB13-204ENST00000518081 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
EFCAB13-204ENST00000518081 FXR2P51116 673 aaKnown RBP eCLIP16.26■□□□□ 0.19
EFCAB13-204ENST00000518081 GSE1Q14687 1217 aa16.26■□□□□ 0.19
EFCAB13-204ENST00000518081 NPM1P06748 294 aaKnown RBP eCLIP16.25■□□□□ 0.19
EFCAB13-204ENST00000518081 CHRDL2Q6WN34 429 aa16.25■□□□□ 0.19
EFCAB13-204ENST00000518081 DCAF8Q5TAQ9 597 aa16.24■□□□□ 0.19
EFCAB13-204ENST00000518081 PRKAR2AP13861 404 aaKnown RBP16.22■□□□□ 0.19
EFCAB13-204ENST00000518081 RGL2O15211 777 aa16.21■□□□□ 0.19
EFCAB13-204ENST00000518081 RASEFQ8IZ41 740 aa16.21■□□□□ 0.19
EFCAB13-204ENST00000518081 TRIM41Q8WV44 630 aa16.2■□□□□ 0.18
EFCAB13-204ENST00000518081 FARP1Q9Y4F1 1045 aaPredicted RBP16.19■□□□□ 0.18
EFCAB13-204ENST00000518081 FAM212AQ96EL1 285 aa16.18■□□□□ 0.18
EFCAB13-204ENST00000518081 PIP4P2Q8N4L2 257 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms