RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, human

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TUSC3-213	ENST00000515859	CPD	O75976	1380 aa		33.06	■■■□□ 2.88
TUSC3-213	ENST00000515859	HAP1	P54257	671 aa	Predicted RBP	33.06	■■■□□ 2.88
TUSC3-213	ENST00000515859	ZC3H6	P61129	1189 aa	Known RBP	33.06	■■■□□ 2.88
TUSC3-213	ENST00000515859	EIF4A2	Q14240	407 aa	Known RBP	33.05	■■■□□ 2.88
TUSC3-213	ENST00000515859	BLM	P54132	1417 aa	Predicted RBP	33.03	■■■□□ 2.88
TUSC3-213	ENST00000515859	ZBTB7C	A1YPR0	619 aa		33.02	■■■□□ 2.88
TUSC3-213	ENST00000515859	HNRNPU	Q00839	825 aa	Known RBP eCLIP	33.02	■■■□□ 2.88
TUSC3-213	ENST00000515859	COL22A1	Q8NFW1	1626 aa	Predicted RBP	33.01	■■■□□ 2.87
TUSC3-213	ENST00000515859	PNN	Q9H307	717 aa	Known RBP	33	■■■□□ 2.87
TUSC3-213	ENST00000515859	ABCC6	O95255	1503 aa		32.99	■■■□□ 2.87
TUSC3-213	ENST00000515859	KIAA0232	Q92628	1395 aa		32.99	■■■□□ 2.87
TUSC3-213	ENST00000515859	FCHSD2	O94868	740 aa		32.98	■■■□□ 2.87
TUSC3-213	ENST00000515859	ABCA3	Q99758	1704 aa		32.96	■■■□□ 2.87
TUSC3-213	ENST00000515859	RUNDC1	Q96C34	613 aa		32.95	■■■□□ 2.86
TUSC3-213	ENST00000515859	PRDM11	Q9NQV5	511 aa		32.95	■■■□□ 2.86
TUSC3-213	ENST00000515859	AXIN2	Q9Y2T1	843 aa		32.93	■■■□□ 2.86
TUSC3-213	ENST00000515859	CCDC146	Q8IYE0	955 aa		32.92	■■■□□ 2.86
TUSC3-213	ENST00000515859	LTV1	Q96GA3	475 aa	Predicted RBP	32.91	■■■□□ 2.86
TUSC3-213	ENST00000515859	JCAD	Q9P266	1359 aa		32.91	■■■□□ 2.86
TUSC3-213	ENST00000515859	IGSF1	Q8N6C5	1336 aa		32.9	■■■□□ 2.86
TUSC3-213	ENST00000515859	CHRNA2	Q15822	529 aa		32.9	■■■□□ 2.86
TUSC3-213	ENST00000515859	EYA1	Q99502	592 aa		32.9	■■■□□ 2.86
TUSC3-213	ENST00000515859	RSPH6A	Q9H0K4	717 aa		32.9	■■■□□ 2.86
TUSC3-213	ENST00000515859	COL18A1	P39060	1754 aa		32.89	■■■□□ 2.86
TUSC3-213	ENST00000515859	ANKRD24	Q8TF21	1146 aa		32.88	■■■□□ 2.85
TUSC3-213	ENST00000515859	PLEKHF1	Q96S99	279 aa		32.88	■■■□□ 2.85
TUSC3-213	ENST00000515859	RGPD1	P0DJD0	1748 aa		32.88	■■■□□ 2.85
TUSC3-213	ENST00000515859	HMOX1	P09601	288 aa		32.88	■■■□□ 2.85
TUSC3-213	ENST00000515859	SULT6B1	Q6IMI4	303 aa		32.88	■■■□□ 2.85
TUSC3-213	ENST00000515859	ERBB3	P21860	1342 aa		32.87	■■■□□ 2.85
TUSC3-213	ENST00000515859	ZBED9	Q6R2W3	1325 aa		32.87	■■■□□ 2.85
TUSC3-213	ENST00000515859	NEFM	P07197	916 aa		32.87	■■■□□ 2.85
TUSC3-213	ENST00000515859	NGEF	Q8N5V2	710 aa		32.87	■■■□□ 2.85
TUSC3-213	ENST00000515859	MAPK8IP3	Q9UPT6	1336 aa		32.85	■■■□□ 2.85
TUSC3-213	ENST00000515859	APAF1	O14727	1248 aa		32.84	■■■□□ 2.85
TUSC3-213	ENST00000515859	PRKAR2B	P31323	418 aa		32.84	■■■□□ 2.85
TUSC3-213	ENST00000515859	KDR	P35968	1356 aa		32.84	■■■□□ 2.85
TUSC3-213	ENST00000515859	FAM83G	A6ND36	823 aa		32.84	■■■□□ 2.85
TUSC3-213	ENST00000515859	HSPA1L	P34931	641 aa		32.84	■■■□□ 2.85
TUSC3-213	ENST00000515859	NBPF6	Q5VWK0	638 aa		32.81	■■■□□ 2.84
TUSC3-213	ENST00000515859	AEBP1	Q8IUX7	1158 aa		32.81	■■■□□ 2.84
TUSC3-213	ENST00000515859	TCP11L2	Q8N4U5	519 aa		32.81	■■■□□ 2.84
TUSC3-213	ENST00000515859	NBPF4	Q96M43	638 aa		32.81	■■■□□ 2.84
TUSC3-213	ENST00000515859	NCBP3	Q53F19	620 aa	Known RBP	32.8	■■■□□ 2.84
TUSC3-213	ENST00000515859	LMO7	Q8WWI1	1683 aa		32.8	■■■□□ 2.84
TUSC3-213	ENST00000515859	RGPD5	Q99666	1765 aa		32.79	■■■□□ 2.84
TUSC3-213	ENST00000515859	SPATA31A6	Q5VVP1	1343 aa		32.79	■■■□□ 2.84
TUSC3-213	ENST00000515859	CAMTA1	Q9Y6Y1	1673 aa		32.78	■■■□□ 2.84
TUSC3-213	ENST00000515859	CENPB	P07199	599 aa	Predicted RBP	32.77	■■■□□ 2.84
TUSC3-213	ENST00000515859	CSB-PGBD3	P0DP91	1061 aa		32.77	■■■□□ 2.84
TUSC3-213	ENST00000515859	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.76	■■■□□ 2.83
TUSC3-213	ENST00000515859	NUTM2E	B1AL46	878 aa	Predicted RBP	32.76	■■■□□ 2.83
TUSC3-213	ENST00000515859	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.76	■■■□□ 2.83
TUSC3-213	ENST00000515859	NCAPD2	Q15021	1401 aa		32.76	■■■□□ 2.83
TUSC3-213	ENST00000515859	COL14A1	Q05707	1796 aa	Known RBP	32.76	■■■□□ 2.83
TUSC3-213	ENST00000515859	COL5A2	P05997	1499 aa	Predicted RBP	32.74	■■■□□ 2.83
TUSC3-213	ENST00000515859	SENP3-EIF4A1	A0A087X0R7	540 aa		32.74	■■■□□ 2.83
TUSC3-213	ENST00000515859	ADAMTS2	O95450	1211 aa		32.74	■■■□□ 2.83
TUSC3-213	ENST00000515859	SALL2	Q9Y467	1007 aa	Predicted RBP	32.74	■■■□□ 2.83
TUSC3-213	ENST00000515859	WDR17	Q8IZU2	1322 aa		32.74	■■■□□ 2.83
TUSC3-213	ENST00000515859	NLRP2	Q9NX02	1062 aa		32.73	■■■□□ 2.83
TUSC3-213	ENST00000515859	FAM208A	Q9UK61	1670 aa	Known RBP	32.73	■■■□□ 2.83
TUSC3-213	ENST00000515859	TMPO	P42166	694 aa	Known RBP	32.73	■■■□□ 2.83
TUSC3-213	ENST00000515859	PHACTR3	Q96KR7	559 aa		32.73	■■■□□ 2.83
TUSC3-213	ENST00000515859	EVA1C	P58658	441 aa		32.72	■■■□□ 2.83
TUSC3-213	ENST00000515859	BTG4	Q9NY30	223 aa		32.72	■■■□□ 2.83
TUSC3-213	ENST00000515859	USHBP1	Q8N6Y0	703 aa		32.71	■■■□□ 2.83
TUSC3-213	ENST00000515859	CCDC27	Q2M243	656 aa		32.7	■■■□□ 2.83
TUSC3-213	ENST00000515859	NFE2L2	Q16236	605 aa		32.69	■■■□□ 2.82
TUSC3-213	ENST00000515859	NEUROD2	Q15784	382 aa		32.68	■■■□□ 2.82
TUSC3-213	ENST00000515859	RRP7A	Q9Y3A4	280 aa	Known RBP	32.68	■■■□□ 2.82
TUSC3-213	ENST00000515859	RGPD2	P0DJD1	1756 aa		32.67	■■■□□ 2.82
TUSC3-213	ENST00000515859	PDE3B	Q13370	1112 aa		32.67	■■■□□ 2.82
TUSC3-213	ENST00000515859	TOM1L2	Q6ZVM7	507 aa		32.66	■■■□□ 2.82
TUSC3-213	ENST00000515859	RIPK4	P57078	832 aa		32.66	■■■□□ 2.82
TUSC3-213	ENST00000515859	PHF23	Q9BUL5	403 aa	Predicted RBP	32.66	■■■□□ 2.82
TUSC3-213	ENST00000515859	STRN4	Q9NRL3	753 aa		32.66	■■■□□ 2.82
TUSC3-213	ENST00000515859	ZNF521	Q96K83	1311 aa		32.65	■■■□□ 2.82
TUSC3-213	ENST00000515859	CARD10	Q9BWT7	1032 aa		32.64	■■■□□ 2.82
TUSC3-213	ENST00000515859	WWC1	Q8IX03	1113 aa		32.63	■■■□□ 2.81
TUSC3-213	ENST00000515859	GAS2L2	Q8NHY3	880 aa		32.63	■■■□□ 2.81
TUSC3-213	ENST00000515859	PLEKHG2	Q9H7P9	1386 aa		32.63	■■■□□ 2.81
TUSC3-213	ENST00000515859	LARP1	Q6PKG0	1096 aa	Known RBP	32.62	■■■□□ 2.81
TUSC3-213	ENST00000515859	RAPGEF4	Q8WZA2	1011 aa		32.62	■■■□□ 2.81
TUSC3-213	ENST00000515859	LMOD3	Q0VAK6	560 aa		32.61	■■■□□ 2.81
TUSC3-213	ENST00000515859	CRB1	P82279	1406 aa		32.6	■■■□□ 2.81
TUSC3-213	ENST00000515859	AMOT	Q4VCS5	1084 aa		32.6	■■■□□ 2.81
TUSC3-213	ENST00000515859	MTHFSD	Q2M296	383 aa	Known RBP	32.59	■■■□□ 2.81
TUSC3-213	ENST00000515859	SLIT2	O94813	1529 aa		32.59	■■■□□ 2.81
TUSC3-213	ENST00000515859	TRIM35	Q9UPQ4	493 aa		32.59	■■■□□ 2.81
TUSC3-213	ENST00000515859	GOLGA2	Q08379	1002 aa		32.58	■■■□□ 2.81
TUSC3-213	ENST00000515859	PLEKHO1	Q53GL0	409 aa	Predicted RBP	32.58	■■■□□ 2.81
TUSC3-213	ENST00000515859	WDR63	Q8IWG1	891 aa		32.58	■■■□□ 2.81
TUSC3-213	ENST00000515859	PLCH1	Q4KWH8	1693 aa		32.57	■■■□□ 2.81
TUSC3-213	ENST00000515859	FBXO41	Q8TF61	875 aa		32.57	■■■□□ 2.8
TUSC3-213	ENST00000515859	LRP6	O75581	1613 aa		32.57	■■■□□ 2.8
TUSC3-213	ENST00000515859	TAT	P17735	454 aa	Predicted RBP	32.56	■■■□□ 2.8
TUSC3-213	ENST00000515859	NGLY1	Q96IV0	654 aa		32.56	■■■□□ 2.8
TUSC3-213	ENST00000515859	NWD2	Q9ULI1	1742 aa		32.56	■■■□□ 2.8
TUSC3-213	ENST00000515859	C8orf37	Q96NL8	207 aa		32.55	■■■□□ 2.8

Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms