RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 PHTF2Q8N3S3 785 aa8.1□□□□□ -1.11
RUFY3-214ENST00000515442 PLPP7Q8NBV4 271 aa8.1□□□□□ -1.11
RUFY3-214ENST00000515442 PCDH10Q9P2E7 1040 aa8.1□□□□□ -1.11
RUFY3-214ENST00000515442 NCOA4Q13772 614 aa8.09□□□□□ -1.11
RUFY3-214ENST00000515442 RNF20Q5VTR2 975 aa8.09□□□□□ -1.11
RUFY3-214ENST00000515442 ANKLE1Q8NAG6 615 aa8.09□□□□□ -1.11
RUFY3-214ENST00000515442 MKRN1Q9UHC7 482 aaKnown RBP8.09□□□□□ -1.11
RUFY3-214ENST00000515442 PATL2C9JE40 543 aaKnown RBP8.08□□□□□ -1.12
RUFY3-214ENST00000515442 RNF223E7ERA6 249 aa8.08□□□□□ -1.12
RUFY3-214ENST00000515442 ATP5J2-PTCD1G3V325 749 aa8.08□□□□□ -1.12
RUFY3-214ENST00000515442 SH3BP2P78314 561 aa8.08□□□□□ -1.12
RUFY3-214ENST00000515442 EML3Q32P44 896 aa8.08□□□□□ -1.12
RUFY3-214ENST00000515442 NBPF20Q3BBV1 942 aa8.08□□□□□ -1.12
RUFY3-214ENST00000515442 LARP1Q6PKG0 1096 aaKnown RBP8.08□□□□□ -1.12
RUFY3-214ENST00000515442 CDV3Q9UKY7 258 aaKnown RBP8.08□□□□□ -1.12
RUFY3-214ENST00000515442 GIGYF1O75420 1035 aaPredicted RBP8.07□□□□□ -1.12
RUFY3-214ENST00000515442 RASA1P20936 1047 aa8.07□□□□□ -1.12
RUFY3-214ENST00000515442 TRIM32Q13049 653 aa8.07□□□□□ -1.12
RUFY3-214ENST00000515442 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
RUFY3-214ENST00000515442 C4orf48Q5BLP8 95 aa8.07□□□□□ -1.12
RUFY3-214ENST00000515442 DOLKQ9UPQ8 538 aa8.07□□□□□ -1.12
RUFY3-214ENST00000515442 FAM196BA6NMK8 535 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 BRD1O95696 1058 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 TRIM50Q86XT4 487 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 CCDC125Q86Z20 511 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 SPNS2Q8IVW8 549 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 C1QTNF2Q9BXJ5 285 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 CHIC2Q9UKJ5 165 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 NOVA2Q9UNW9 492 aaKnown RBP8.06□□□□□ -1.12
RUFY3-214ENST00000515442 NOD1Q9Y239 953 aa8.06□□□□□ -1.12
RUFY3-214ENST00000515442 WNT7BP56706 349 aa8.05□□□□□ -1.12
RUFY3-214ENST00000515442 TRMT44Q8IYL2 757 aaKnown RBP8.05□□□□□ -1.12
RUFY3-214ENST00000515442 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.05□□□□□ -1.12
RUFY3-214ENST00000515442 TMEM88BA6NKF7 163 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L15C9J2P7 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L10C9JJH3 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L13C9JLJ4 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L12C9JPN9 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L11C9JVI0 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L21D6R901 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L18D6R9N7 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L22D6RA61 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L17D6RBQ6 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L19D6RCP7 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L20D6RJB6 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 VARSP26640 1264 aaKnown RBP8.04□□□□□ -1.12
RUFY3-214ENST00000515442 RPIAP49247 311 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 ATP1A2P50993 1020 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 KCNA1Q09470 495 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 USP17L24Q0WX57 530 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 OXLD1Q5BKU9 147 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 PPP1R18Q6NYC8 613 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 TRAF7Q6Q0C0 670 aa8.04□□□□□ -1.12
RUFY3-214ENST00000515442 CCDC85AQ96PX6 553 aaPredicted RBP8.04□□□□□ -1.12
RUFY3-214ENST00000515442 CARNS1A5YM72 827 aa8.03□□□□□ -1.12
RUFY3-214ENST00000515442 CD2BP2O95400 341 aaKnown RBP8.03□□□□□ -1.12
RUFY3-214ENST00000515442 TSGA10IPQ3SY00 556 aa8.03□□□□□ -1.12
RUFY3-214ENST00000515442 CRTC2Q53ET0 693 aaPredicted RBP8.03□□□□□ -1.12
RUFY3-214ENST00000515442 PLA2G2CQ5R387 149 aa8.03□□□□□ -1.12
RUFY3-214ENST00000515442 B4GALNT3Q6L9W6 998 aa8.03□□□□□ -1.12
RUFY3-214ENST00000515442 SEPT12Q8IYM1 358 aa8.03□□□□□ -1.12
RUFY3-214ENST00000515442 SIRT1Q96EB6 747 aa8.03□□□□□ -1.12
RUFY3-214ENST00000515442 PTK7Q13308 1070 aa8.02□□□□□ -1.13
RUFY3-214ENST00000515442 TMEM164Q5U3C3 297 aa8.02□□□□□ -1.13
RUFY3-214ENST00000515442 OGFOD1Q8N543 542 aa8.02□□□□□ -1.13
RUFY3-214ENST00000515442 FAM200AQ8TCP9 573 aa8.02□□□□□ -1.13
RUFY3-214ENST00000515442 STK32AQ8WU08 396 aa8.02□□□□□ -1.13
RUFY3-214ENST00000515442 CDCA7Q9BWT1 371 aaPredicted RBP8.02□□□□□ -1.13
RUFY3-214ENST00000515442 DNAAF2Q9NVR5 837 aaKnown RBP8.02□□□□□ -1.13
RUFY3-214ENST00000515442 ZMIZ1Q9ULJ6 1067 aa8.02□□□□□ -1.13
RUFY3-214ENST00000515442 CCDC9Q9Y3X0 531 aaKnown RBP8.02□□□□□ -1.13
RUFY3-214ENST00000515442 ESPNB1AK53 854 aa8.01□□□□□ -1.13
RUFY3-214ENST00000515442 USP4Q13107 963 aa8.01□□□□□ -1.13
RUFY3-214ENST00000515442 EHBP1Q8NDI1 1231 aa8.01□□□□□ -1.13
RUFY3-214ENST00000515442 KCTD15Q96SI1 283 aaPredicted RBP8.01□□□□□ -1.13
RUFY3-214ENST00000515442 RBM19Q9Y4C8 960 aaKnown RBP8.01□□□□□ -1.13
RUFY3-214ENST00000515442 PCDHB11Q9Y5F2 797 aa8.01□□□□□ -1.13
RUFY3-214ENST00000515442 RAB15P59190 212 aa8□□□□□ -1.13
RUFY3-214ENST00000515442 SKOR1P84550 965 aa8□□□□□ -1.13
RUFY3-214ENST00000515442 VASH1Q7L8A9 365 aaPredicted RBP8□□□□□ -1.13
RUFY3-214ENST00000515442 ANKMY2Q8IV38 441 aa8□□□□□ -1.13
RUFY3-214ENST00000515442 LARGE2Q8N3Y3 721 aa8□□□□□ -1.13
RUFY3-214ENST00000515442 TRIM52Q96A61 297 aa8□□□□□ -1.13
RUFY3-214ENST00000515442 ZNF594Q96JF6 807 aaPredicted RBP8□□□□□ -1.13
RUFY3-214ENST00000515442 MAP4K5Q9Y4K4 846 aa8□□□□□ -1.13
RUFY3-214ENST00000515442 GTF2IP78347 998 aa7.99□□□□□ -1.13
RUFY3-214ENST00000515442 GZF1Q9H116 711 aaPredicted RBP7.99□□□□□ -1.13
RUFY3-214ENST00000515442 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
RUFY3-214ENST00000515442 MYCP01106 439 aaPredicted RBP7.98□□□□□ -1.13
RUFY3-214ENST00000515442 CLDN10P78369 228 aa7.98□□□□□ -1.13
RUFY3-214ENST00000515442 PSME1Q06323 249 aa7.98□□□□□ -1.13
RUFY3-214ENST00000515442 DPYDQ12882 1025 aa7.98□□□□□ -1.13
RUFY3-214ENST00000515442 ARID5BQ14865 1188 aa7.98□□□□□ -1.13
RUFY3-214ENST00000515442 RC3H1Q5TC82 1133 aaKnown RBP7.98□□□□□ -1.13
RUFY3-214ENST00000515442 SEC13P55735 322 aa7.96□□□□□ -1.14
RUFY3-214ENST00000515442 CCDC102BQ68D86 513 aa7.96□□□□□ -1.14
RUFY3-214ENST00000515442 ZBTB7BO15156 539 aaPredicted RBP7.95□□□□□ -1.14
RUFY3-214ENST00000515442 DHX9Q08211 1270 aaKnown RBP7.95□□□□□ -1.14
RUFY3-214ENST00000515442 SWI5Q1ZZU3 235 aa7.95□□□□□ -1.14
RUFY3-214ENST00000515442 INTS6LQ5JSJ4 861 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms