RNA–Protein interactions for RNA: ENST00000515442.1

RUFY3-214, Transcript of RUN and FYVE domain containing 3, humanhuman

TSL 3

Gene RUFY3, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY3-214ENST00000515442 CHIC1Q5VXU3 224 aa19.42■□□□□ 0.7
RUFY3-214ENST00000515442 AEBP2Q6ZN18 517 aaPredicted RBP19.42■□□□□ 0.7
RUFY3-214ENST00000515442 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
RUFY3-214ENST00000515442 SENP3Q9H4L4 574 aaPredicted RBP16.49■□□□□ 0.23
RUFY3-214ENST00000515442 PLPPR3Q6T4P5 718 aa16■□□□□ 0.15
RUFY3-214ENST00000515442 FOXD1Q16676 465 aa15.21■□□□□ 0.03
RUFY3-214ENST00000515442 ADRA2BP18089 450 aa14.98□□□□□ -0.01
RUFY3-214ENST00000515442 PPP6R1Q9UPN7 881 aa14.94□□□□□ -0.02
RUFY3-214ENST00000515442 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
RUFY3-214ENST00000515442 KCNA4P22459 653 aa14.26□□□□□ -0.13
RUFY3-214ENST00000515442 PPP4R3CPQ6ZMV5 832 aa14.13□□□□□ -0.15
RUFY3-214ENST00000515442 NCBP3Q53F19 620 aaKnown RBP13.94□□□□□ -0.18
RUFY3-214ENST00000515442 MSH5O43196 834 aa13.91□□□□□ -0.18
RUFY3-214ENST00000515442 EHMT2Q96KQ7 1210 aa13.79□□□□□ -0.2
RUFY3-214ENST00000515442 SCAF1Q9H7N4 1312 aaKnown RBP13.79□□□□□ -0.2
RUFY3-214ENST00000515442 SLC4A1APQ9BWU0 796 aaKnown RBP13.7□□□□□ -0.22
RUFY3-214ENST00000515442 NPM3O75607 178 aaKnown RBP13.66□□□□□ -0.22
RUFY3-214ENST00000515442 CNKSR2Q8WXI2 1034 aa13.66□□□□□ -0.22
RUFY3-214ENST00000515442 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
RUFY3-214ENST00000515442 CSRNP3Q8WYN3 585 aa13.39□□□□□ -0.27
RUFY3-214ENST00000515442 RNF216Q9NWF9 866 aaPredicted RBP13.28□□□□□ -0.28
RUFY3-214ENST00000515442 DMRT2Q9Y5R5 561 aa13.21□□□□□ -0.29
RUFY3-214ENST00000515442 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
RUFY3-214ENST00000515442 ZBTB22O15209 634 aa13.09□□□□□ -0.31
RUFY3-214ENST00000515442 HOXD11P31277 338 aaPredicted RBP13.09□□□□□ -0.31
RUFY3-214ENST00000515442 FOXD4L1Q9NU39 408 aa13.03□□□□□ -0.32
RUFY3-214ENST00000515442 SLC4A2P04920 1241 aa12.77□□□□□ -0.37
RUFY3-214ENST00000515442 DCAF8L1A6NGE4 600 aa12.67□□□□□ -0.38
RUFY3-214ENST00000515442 MYCNP04198 464 aaPredicted RBP12.65□□□□□ -0.38
RUFY3-214ENST00000515442 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
RUFY3-214ENST00000515442 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.53□□□□□ -0.4
RUFY3-214ENST00000515442 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.39□□□□□ -0.43
RUFY3-214ENST00000515442 HNRNPUL2Q1KMD3 747 aaKnown RBP12.39□□□□□ -0.43
RUFY3-214ENST00000515442 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
RUFY3-214ENST00000515442 U3KPZ7 1027 aaPredicted RBP12.32□□□□□ -0.44
RUFY3-214ENST00000515442 ATF5Q9Y2D1 282 aaPredicted RBP12.22□□□□□ -0.45
RUFY3-214ENST00000515442 APLP2Q06481 763 aa12.18□□□□□ -0.46
RUFY3-214ENST00000515442 FKBP8Q14318 412 aa12.12□□□□□ -0.47
RUFY3-214ENST00000515442 ZNF219Q9P2Y4 722 aaPredicted RBP12.04□□□□□ -0.48
RUFY3-214ENST00000515442 RNF39Q9H2S5 420 aa11.92□□□□□ -0.5
RUFY3-214ENST00000515442 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
RUFY3-214ENST00000515442 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
RUFY3-214ENST00000515442 SPINK5Q9NQ38 1064 aaPredicted RBP11.84□□□□□ -0.51
RUFY3-214ENST00000515442 CAPN15O75808 1086 aa11.83□□□□□ -0.52
RUFY3-214ENST00000515442 C1QBPQ07021 282 aaKnown RBP11.83□□□□□ -0.52
RUFY3-214ENST00000515442 AMER1Q5JTC6 1135 aaPredicted RBP11.81□□□□□ -0.52
RUFY3-214ENST00000515442 FBLN2P98095 1184 aa11.78□□□□□ -0.52
RUFY3-214ENST00000515442 POLA2Q14181 598 aa11.76□□□□□ -0.53
RUFY3-214ENST00000515442 RTN4Q9NQC3 1192 aaKnown RBP11.74□□□□□ -0.53
RUFY3-214ENST00000515442 SPDYE4A6NLX3 237 aa11.71□□□□□ -0.53
RUFY3-214ENST00000515442 MKRN4PQ13434 485 aaPredicted RBP11.71□□□□□ -0.53
RUFY3-214ENST00000515442 ZBTB12Q9Y330 459 aaPredicted RBP11.64□□□□□ -0.55
RUFY3-214ENST00000515442 ABCB7O75027 752 aa11.62□□□□□ -0.55
RUFY3-214ENST00000515442 FBXO3Q9UK99 471 aa11.62□□□□□ -0.55
RUFY3-214ENST00000515442 PROM2Q8N271 834 aa11.53□□□□□ -0.56
RUFY3-214ENST00000515442 DSG3P32926 999 aa11.49□□□□□ -0.57
RUFY3-214ENST00000515442 VASPP50552 380 aaPredicted RBP11.4□□□□□ -0.58
RUFY3-214ENST00000515442 ZNF692Q9BU19 519 aaPredicted RBP11.37□□□□□ -0.59
RUFY3-214ENST00000515442 CACNB1Q02641 598 aaPredicted RBP11.35□□□□□ -0.59
RUFY3-214ENST00000515442 SPDYE2BA6NHP3 402 aa11.34□□□□□ -0.59
RUFY3-214ENST00000515442 SPDYE6P0CI01 402 aa11.34□□□□□ -0.59
RUFY3-214ENST00000515442 SPDYE2Q495Y8 402 aa11.34□□□□□ -0.59
RUFY3-214ENST00000515442 SLC24A1O60721 1099 aa11.33□□□□□ -0.6
RUFY3-214ENST00000515442 OSCARQ8IYS5 282 aa11.33□□□□□ -0.6
RUFY3-214ENST00000515442 SSUH2Q9Y2M2 353 aa11.26□□□□□ -0.61
RUFY3-214ENST00000515442 IFNLR1Q8IU57 520 aaPredicted RBP11.25□□□□□ -0.61
RUFY3-214ENST00000515442 STAG3Q9UJ98 1225 aa11.23□□□□□ -0.61
RUFY3-214ENST00000515442 PABPN1Q86U42 306 aaKnown RBP eCLIP11.21□□□□□ -0.61
RUFY3-214ENST00000515442 KLHL34Q8N239 644 aa11.16□□□□□ -0.62
RUFY3-214ENST00000515442 PLCD3Q8N3E9 789 aa11.13□□□□□ -0.63
RUFY3-214ENST00000515442 SPOCK2Q92563 424 aa11.1□□□□□ -0.63
RUFY3-214ENST00000515442 MIER1Q8N108 512 aa11.09□□□□□ -0.63
RUFY3-214ENST00000515442 PLEKHG5O94827 1062 aa11.05□□□□□ -0.64
RUFY3-214ENST00000515442 DCAF8L2P0C7V8 631 aa11.04□□□□□ -0.64
RUFY3-214ENST00000515442 PKD2Q13563 968 aa11.04□□□□□ -0.64
RUFY3-214ENST00000515442 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
RUFY3-214ENST00000515442 ZBTB47Q9UFB7 747 aaPredicted RBP10.99□□□□□ -0.65
RUFY3-214ENST00000515442 ECM2O94769 699 aaPredicted RBP10.94□□□□□ -0.66
RUFY3-214ENST00000515442 AKT1S1Q96B36 256 aa10.93□□□□□ -0.66
RUFY3-214ENST00000515442 SPDYE1Q8NFV5 336 aaPredicted RBP10.91□□□□□ -0.66
RUFY3-214ENST00000515442 PLCB2Q00722 1185 aa10.89□□□□□ -0.67
RUFY3-214ENST00000515442 CIZ1Q9ULV3 898 aaPredicted RBP10.87□□□□□ -0.67
RUFY3-214ENST00000515442 CLEC11AQ9Y240 323 aa10.84□□□□□ -0.67
RUFY3-214ENST00000515442 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
RUFY3-214ENST00000515442 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
RUFY3-214ENST00000515442 TRIM41Q8WV44 630 aa10.79□□□□□ -0.68
RUFY3-214ENST00000515442 RGL2O15211 777 aa10.78□□□□□ -0.68
RUFY3-214ENST00000515442 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.78□□□□□ -0.68
RUFY3-214ENST00000515442 HAP1P54257 671 aaPredicted RBP10.76□□□□□ -0.69
RUFY3-214ENST00000515442 GSE1Q14687 1217 aa10.76□□□□□ -0.69
RUFY3-214ENST00000515442 BBXQ8WY36 941 aaPredicted RBP10.76□□□□□ -0.69
RUFY3-214ENST00000515442 CREBZFQ9NS37 354 aa10.72□□□□□ -0.69
RUFY3-214ENST00000515442 NPM1P06748 294 aaKnown RBP eCLIP10.7□□□□□ -0.7
RUFY3-214ENST00000515442 NUBP1P53384 320 aa10.7□□□□□ -0.7
RUFY3-214ENST00000515442 DCAF8Q5TAQ9 597 aa10.7□□□□□ -0.7
RUFY3-214ENST00000515442 PITPNM1O00562 1244 aa10.67□□□□□ -0.7
RUFY3-214ENST00000515442 FAM212AQ96EL1 285 aa10.67□□□□□ -0.7
RUFY3-214ENST00000515442 CHGAP10645 457 aaKnown RBP10.66□□□□□ -0.7
RUFY3-214ENST00000515442 PAXIP1Q6ZW49 1069 aaPredicted RBP10.65□□□□□ -0.7
RUFY3-214ENST00000515442 CFAP44Q96MT7 982 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms