RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 B4GALNT3Q6L9W6 998 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 PLPP7Q8NBV4 271 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 MKRN1Q9UHC7 482 aaKnown RBP7.06□□□□□ -1.28
HERC6-208ENST00000515365 MYT1LQ9UL68 1186 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 IVNS1ABPQ9Y6Y0 642 aa7.06□□□□□ -1.28
HERC6-208ENST00000515365 POTEMA6NI47 508 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 ATP5J2-PTCD1G3V325 749 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 PTK7Q13308 1070 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 MAP7D1Q3KQU3 841 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 SH3RF1Q7Z6J0 888 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 ZBTB33Q86T24 672 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 CCDC24Q8N4L8 307 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 SLC6A16Q9GZN6 736 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 IL21Q9HBE4 155 aa7.05□□□□□ -1.28
HERC6-208ENST00000515365 LARP1Q6PKG0 1096 aaKnown RBP7.04□□□□□ -1.28
HERC6-208ENST00000515365 TRAF7Q6Q0C0 670 aa7.04□□□□□ -1.28
HERC6-208ENST00000515365 ZNF516Q92618 1163 aa7.04□□□□□ -1.28
HERC6-208ENST00000515365 GNEQ9Y223 722 aaKnown RBP7.04□□□□□ -1.28
HERC6-208ENST00000515365 RASA1P20936 1047 aa7.03□□□□□ -1.28
HERC6-208ENST00000515365 DZIP3Q86Y13 1208 aaKnown RBP7.03□□□□□ -1.28
HERC6-208ENST00000515365 MTMR7Q9Y216 660 aa7.03□□□□□ -1.28
HERC6-208ENST00000515365 FAM69CQ0P6D2 419 aa7.02□□□□□ -1.29
HERC6-208ENST00000515365 EML3Q32P44 896 aa7.02□□□□□ -1.29
HERC6-208ENST00000515365 TSGA10IPQ3SY00 556 aa7.02□□□□□ -1.29
HERC6-208ENST00000515365 PHLDB3Q6NSJ2 640 aa7.02□□□□□ -1.29
HERC6-208ENST00000515365 MAGEB6P1A0A0J9YX57 407 aa7.01□□□□□ -1.29
HERC6-208ENST00000515365 ERFEQ4G0M1 354 aa7.01□□□□□ -1.29
HERC6-208ENST00000515365 SND1Q7KZF4 910 aaKnown RBP eCLIP7.01□□□□□ -1.29
HERC6-208ENST00000515365 BPHLQ86WA6 291 aaPredicted RBP7.01□□□□□ -1.29
HERC6-208ENST00000515365 ANKMY2Q8IV38 441 aa7.01□□□□□ -1.29
HERC6-208ENST00000515365 FAM200AQ8TCP9 573 aa7.01□□□□□ -1.29
HERC6-208ENST00000515365 BAP1Q92560 729 aa7.01□□□□□ -1.29
HERC6-208ENST00000515365 CCDC85AQ96PX6 553 aaPredicted RBP7.01□□□□□ -1.29
HERC6-208ENST00000515365 CDCA7Q9BWT1 371 aaPredicted RBP7.01□□□□□ -1.29
HERC6-208ENST00000515365 CARD14Q9BXL6 1004 aa7.01□□□□□ -1.29
HERC6-208ENST00000515365 SLAIN2Q9P270 581 aa7.01□□□□□ -1.29
HERC6-208ENST00000515365 S1PR4O95977 384 aa7□□□□□ -1.29
HERC6-208ENST00000515365 PTPN5P54829 565 aa7□□□□□ -1.29
HERC6-208ENST00000515365 CLDN10P78369 228 aa7□□□□□ -1.29
HERC6-208ENST00000515365 C4orf48Q5BLP8 95 aa7□□□□□ -1.29
HERC6-208ENST00000515365 TXNDC2Q86VQ3 553 aa7□□□□□ -1.29
HERC6-208ENST00000515365 TRIM50Q86XT4 487 aa7□□□□□ -1.29
HERC6-208ENST00000515365 OGFOD1Q8N543 542 aa7□□□□□ -1.29
HERC6-208ENST00000515365 ZNF511Q8NB15 262 aa7□□□□□ -1.29
HERC6-208ENST00000515365 FOXJ1Q92949 421 aa7□□□□□ -1.29
HERC6-208ENST00000515365 CLP1Q92989 425 aaKnown RBP7□□□□□ -1.29
HERC6-208ENST00000515365 DOLKQ9UPQ8 538 aa7□□□□□ -1.29
HERC6-208ENST00000515365 NOD1Q9Y239 953 aa7□□□□□ -1.29
HERC6-208ENST00000515365 GIGYF1O75420 1035 aaPredicted RBP6.99□□□□□ -1.29
HERC6-208ENST00000515365 SSFA2P28290 1259 aa6.99□□□□□ -1.29
HERC6-208ENST00000515365 LINC01559Q495D7 138 aa6.99□□□□□ -1.29
HERC6-208ENST00000515365 NKX2-3Q8TAU0 364 aa6.99□□□□□ -1.29
HERC6-208ENST00000515365 C1QTNF2Q9BXJ5 285 aa6.99□□□□□ -1.29
HERC6-208ENST00000515365 DNAAF2Q9NVR5 837 aaKnown RBP6.99□□□□□ -1.29
HERC6-208ENST00000515365 FCF1Q9Y324 198 aaKnown RBP6.99□□□□□ -1.29
HERC6-208ENST00000515365 DKK1O94907 266 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 ATP1A2P50993 1020 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 DPYDQ12882 1025 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 AGERQ15109 404 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 CCDC27Q2M243 656 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 RNF20Q5VTR2 975 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 LARGE2Q8N3Y3 721 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 ZNF594Q96JF6 807 aaPredicted RBP6.98□□□□□ -1.29
HERC6-208ENST00000515365 LMTK3Q96Q04 1460 aa6.98□□□□□ -1.29
HERC6-208ENST00000515365 ESPNB1AK53 854 aa6.97□□□□□ -1.29
HERC6-208ENST00000515365 ZBTB7BO15156 539 aaPredicted RBP6.97□□□□□ -1.29
HERC6-208ENST00000515365 SWI5Q1ZZU3 235 aa6.97□□□□□ -1.29
HERC6-208ENST00000515365 FOXD4L5Q5VV16 416 aaPredicted RBP6.97□□□□□ -1.29
HERC6-208ENST00000515365 TRMT44Q8IYL2 757 aaKnown RBP6.97□□□□□ -1.29
HERC6-208ENST00000515365 SIX5Q8N196 739 aa6.97□□□□□ -1.29
HERC6-208ENST00000515365 CCER1Q8TC90 406 aaPredicted RBP6.97□□□□□ -1.29
HERC6-208ENST00000515365 FOXD4L4Q8WXT5 416 aaPredicted RBP6.97□□□□□ -1.29
HERC6-208ENST00000515365 SLC10A4Q96EP9 437 aa6.97□□□□□ -1.29
HERC6-208ENST00000515365 KIAA1024Q9UPX6 916 aa6.97□□□□□ -1.29
HERC6-208ENST00000515365 SH3BP2P78314 561 aa6.96□□□□□ -1.3
HERC6-208ENST00000515365 GTF2IP78347 998 aa6.96□□□□□ -1.3
HERC6-208ENST00000515365 NBPF20Q3BBV1 942 aa6.96□□□□□ -1.3
HERC6-208ENST00000515365 OXLD1Q5BKU9 147 aa6.96□□□□□ -1.3
HERC6-208ENST00000515365 ATP2B4P23634 1241 aa6.95□□□□□ -1.3
HERC6-208ENST00000515365 ARID4AP29374 1257 aaPredicted RBP6.95□□□□□ -1.3
HERC6-208ENST00000515365 ILDR2Q71H61 639 aa6.95□□□□□ -1.3
HERC6-208ENST00000515365 PCDH10Q9P2E7 1040 aa6.95□□□□□ -1.3
HERC6-208ENST00000515365 CDV3Q9UKY7 258 aaKnown RBP6.95□□□□□ -1.3
HERC6-208ENST00000515365 CCDC125Q86Z20 511 aa6.94□□□□□ -1.3
HERC6-208ENST00000515365 SEPT12Q8IYM1 358 aa6.94□□□□□ -1.3
HERC6-208ENST00000515365 PCDHGA11Q9Y5H2 935 aa6.94□□□□□ -1.3
HERC6-208ENST00000515365 SEC13P55735 322 aa6.93□□□□□ -1.3
HERC6-208ENST00000515365 CCDC102BQ68D86 513 aa6.93□□□□□ -1.3
HERC6-208ENST00000515365 C1orf216Q8TAB5 229 aa6.93□□□□□ -1.3
HERC6-208ENST00000515365 PCDHB11Q9Y5F2 797 aa6.93□□□□□ -1.3
HERC6-208ENST00000515365 PPEF1O14829 653 aaPredicted RBP6.92□□□□□ -1.3
HERC6-208ENST00000515365 USP4Q13107 963 aa6.92□□□□□ -1.3
HERC6-208ENST00000515365 TPCN2Q8NHX9 752 aa6.92□□□□□ -1.3
HERC6-208ENST00000515365 SIRT1Q96EB6 747 aa6.92□□□□□ -1.3
HERC6-208ENST00000515365 TRIM32Q13049 653 aa6.91□□□□□ -1.3
HERC6-208ENST00000515365 OCLNQ16625 522 aa6.91□□□□□ -1.3
HERC6-208ENST00000515365 CDAN1Q8IWY9 1227 aa6.91□□□□□ -1.3
HERC6-208ENST00000515365 ZNF428Q96B54 188 aa6.91□□□□□ -1.3
HERC6-208ENST00000515365 AMOTL2Q9Y2J4 779 aa6.91□□□□□ -1.3
HERC6-208ENST00000515365 RBM19Q9Y4C8 960 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms