RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 CHIC1Q5VXU3 224 aa16.57■□□□□ 0.24
HERC6-208ENST00000515365 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
HERC6-208ENST00000515365 PHF23Q9BUL5 403 aaPredicted RBP14.64□□□□□ -0.07
HERC6-208ENST00000515365 SENP3Q9H4L4 574 aaPredicted RBP13.9□□□□□ -0.18
HERC6-208ENST00000515365 PLPPR3Q6T4P5 718 aa13.65□□□□□ -0.22
HERC6-208ENST00000515365 FOXD1Q16676 465 aa12.86□□□□□ -0.35
HERC6-208ENST00000515365 ADRA2BP18089 450 aa12.79□□□□□ -0.36
HERC6-208ENST00000515365 PPP6R1Q9UPN7 881 aa12.75□□□□□ -0.37
HERC6-208ENST00000515365 KCNA4P22459 653 aa12.36□□□□□ -0.43
HERC6-208ENST00000515365 PIAS4Q8N2W9 510 aaPredicted RBP12.22□□□□□ -0.45
HERC6-208ENST00000515365 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
HERC6-208ENST00000515365 EHMT2Q96KQ7 1210 aa12.04□□□□□ -0.48
HERC6-208ENST00000515365 NCBP3Q53F19 620 aaKnown RBP11.9□□□□□ -0.5
HERC6-208ENST00000515365 SLC4A1APQ9BWU0 796 aaKnown RBP11.84□□□□□ -0.51
HERC6-208ENST00000515365 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
HERC6-208ENST00000515365 CSRNP3Q8WYN3 585 aa11.71□□□□□ -0.53
HERC6-208ENST00000515365 MSH5O43196 834 aa11.66□□□□□ -0.54
HERC6-208ENST00000515365 CNKSR2Q8WXI2 1034 aa11.65□□□□□ -0.54
HERC6-208ENST00000515365 SCAF1Q9H7N4 1312 aaKnown RBP11.64□□□□□ -0.55
HERC6-208ENST00000515365 MAPK8IP2Q13387 824 aaPredicted RBP11.43□□□□□ -0.58
HERC6-208ENST00000515365 ZBTB22O15209 634 aa11.41□□□□□ -0.58
HERC6-208ENST00000515365 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
HERC6-208ENST00000515365 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
HERC6-208ENST00000515365 FOXD4L1Q9NU39 408 aa11.23□□□□□ -0.61
HERC6-208ENST00000515365 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
HERC6-208ENST00000515365 HOXD11P31277 338 aaPredicted RBP11.15□□□□□ -0.62
HERC6-208ENST00000515365 SLC4A2P04920 1241 aa10.99□□□□□ -0.65
HERC6-208ENST00000515365 MYCNP04198 464 aaPredicted RBP10.84□□□□□ -0.67
HERC6-208ENST00000515365 ATXN8OSP0DMR3 200 aa10.81□□□□□ -0.68
HERC6-208ENST00000515365 DCAF8L1A6NGE4 600 aa10.62□□□□□ -0.71
HERC6-208ENST00000515365 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
HERC6-208ENST00000515365 FKBP8Q14318 412 aa10.53□□□□□ -0.72
HERC6-208ENST00000515365 ATF5Q9Y2D1 282 aaPredicted RBP10.53□□□□□ -0.72
HERC6-208ENST00000515365 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.5□□□□□ -0.73
HERC6-208ENST00000515365 HNRNPUL2Q1KMD3 747 aaKnown RBP10.5□□□□□ -0.73
HERC6-208ENST00000515365 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
HERC6-208ENST00000515365 U3KPZ7 1027 aaPredicted RBP10.5□□□□□ -0.73
HERC6-208ENST00000515365 AMER1Q5JTC6 1135 aaPredicted RBP10.44□□□□□ -0.74
HERC6-208ENST00000515365 RTN4Q9NQC3 1192 aaKnown RBP10.44□□□□□ -0.74
HERC6-208ENST00000515365 ZNF219Q9P2Y4 722 aaPredicted RBP10.29□□□□□ -0.76
HERC6-208ENST00000515365 APLP2Q06481 763 aa10.28□□□□□ -0.76
HERC6-208ENST00000515365 SLC24A1O60721 1099 aa10.2□□□□□ -0.78
HERC6-208ENST00000515365 MKRN4PQ13434 485 aaPredicted RBP10.1□□□□□ -0.79
HERC6-208ENST00000515365 SPDYE4A6NLX3 237 aa10.08□□□□□ -0.8
HERC6-208ENST00000515365 SPINK5Q9NQ38 1064 aaPredicted RBP10.06□□□□□ -0.8
HERC6-208ENST00000515365 RNF39Q9H2S5 420 aa10.05□□□□□ -0.8
HERC6-208ENST00000515365 TRHP20396 242 aaPredicted RBP10.03□□□□□ -0.8
HERC6-208ENST00000515365 PROM2Q8N271 834 aa10.03□□□□□ -0.8
HERC6-208ENST00000515365 FBXO3Q9UK99 471 aa10.03□□□□□ -0.8
HERC6-208ENST00000515365 FBLN2P98095 1184 aa10.02□□□□□ -0.81
HERC6-208ENST00000515365 POLA2Q14181 598 aa10□□□□□ -0.81
HERC6-208ENST00000515365 CAPN15O75808 1086 aa9.97□□□□□ -0.81
HERC6-208ENST00000515365 C1QBPQ07021 282 aaKnown RBP9.95□□□□□ -0.82
HERC6-208ENST00000515365 VASPP50552 380 aaPredicted RBP9.89□□□□□ -0.83
HERC6-208ENST00000515365 ZBTB12Q9Y330 459 aaPredicted RBP9.87□□□□□ -0.83
HERC6-208ENST00000515365 ABCB7O75027 752 aa9.83□□□□□ -0.84
HERC6-208ENST00000515365 IFNLR1Q8IU57 520 aaPredicted RBP9.8□□□□□ -0.84
HERC6-208ENST00000515365 POTEDQ86YR6 584 aa9.79□□□□□ -0.84
HERC6-208ENST00000515365 DSG3P32926 999 aa9.72□□□□□ -0.85
HERC6-208ENST00000515365 ZNF692Q9BU19 519 aaPredicted RBP9.67□□□□□ -0.86
HERC6-208ENST00000515365 PKD2Q13563 968 aa9.66□□□□□ -0.86
HERC6-208ENST00000515365 SPDYE2BA6NHP3 402 aa9.65□□□□□ -0.86
HERC6-208ENST00000515365 SPDYE6P0CI01 402 aa9.65□□□□□ -0.86
HERC6-208ENST00000515365 SPDYE2Q495Y8 402 aa9.65□□□□□ -0.86
HERC6-208ENST00000515365 SSUH2Q9Y2M2 353 aa9.65□□□□□ -0.86
HERC6-208ENST00000515365 PLCB2Q00722 1185 aa9.64□□□□□ -0.87
HERC6-208ENST00000515365 OSCARQ8IYS5 282 aa9.64□□□□□ -0.87
HERC6-208ENST00000515365 STAG3Q9UJ98 1225 aa9.62□□□□□ -0.87
HERC6-208ENST00000515365 SPOCK2Q92563 424 aa9.59□□□□□ -0.87
HERC6-208ENST00000515365 DCAF8L2P0C7V8 631 aa9.58□□□□□ -0.88
HERC6-208ENST00000515365 KLHL34Q8N239 644 aa9.58□□□□□ -0.88
HERC6-208ENST00000515365 PABPN1Q86U42 306 aaKnown RBP eCLIP9.56□□□□□ -0.88
HERC6-208ENST00000515365 PLCD3Q8N3E9 789 aa9.52□□□□□ -0.89
HERC6-208ENST00000515365 ECM2O94769 699 aaPredicted RBP9.49□□□□□ -0.89
HERC6-208ENST00000515365 MIER1Q8N108 512 aa9.49□□□□□ -0.89
HERC6-208ENST00000515365 HAP1P54257 671 aaPredicted RBP9.48□□□□□ -0.89
HERC6-208ENST00000515365 CACNB1Q02641 598 aaPredicted RBP9.41□□□□□ -0.9
HERC6-208ENST00000515365 BBXQ8WY36 941 aaPredicted RBP9.41□□□□□ -0.9
HERC6-208ENST00000515365 RGL2O15211 777 aa9.4□□□□□ -0.9
HERC6-208ENST00000515365 NPM1P06748 294 aaKnown RBP eCLIP9.4□□□□□ -0.9
HERC6-208ENST00000515365 ZBTB47Q9UFB7 747 aaPredicted RBP9.4□□□□□ -0.9
HERC6-208ENST00000515365 PLEKHG5O94827 1062 aa9.39□□□□□ -0.91
HERC6-208ENST00000515365 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.38□□□□□ -0.91
HERC6-208ENST00000515365 VSIG10Q8N0Z9 540 aa9.37□□□□□ -0.91
HERC6-208ENST00000515365 CIZ1Q9ULV3 898 aaPredicted RBP9.34□□□□□ -0.91
HERC6-208ENST00000515365 PAXIP1Q6ZW49 1069 aaPredicted RBP9.32□□□□□ -0.92
HERC6-208ENST00000515365 TRIM41Q8WV44 630 aa9.3□□□□□ -0.92
HERC6-208ENST00000515365 BCANQ96GW7 911 aa9.28□□□□□ -0.92
HERC6-208ENST00000515365 CFAP44Q96MT7 982 aa9.28□□□□□ -0.92
HERC6-208ENST00000515365 KDM2AQ9Y2K7 1162 aa9.26□□□□□ -0.93
HERC6-208ENST00000515365 CHGAP10645 457 aaKnown RBP9.25□□□□□ -0.93
HERC6-208ENST00000515365 SPRYD3Q8NCJ5 442 aa9.25□□□□□ -0.93
HERC6-208ENST00000515365 SPDYE1Q8NFV5 336 aaPredicted RBP9.24□□□□□ -0.93
HERC6-208ENST00000515365 NUBP1P53384 320 aa9.23□□□□□ -0.93
HERC6-208ENST00000515365 GSE1Q14687 1217 aa9.23□□□□□ -0.93
HERC6-208ENST00000515365 AKT1S1Q96B36 256 aa9.23□□□□□ -0.93
HERC6-208ENST00000515365 RBM42Q9BTD8 480 aaKnown RBP9.23□□□□□ -0.93
HERC6-208ENST00000515365 HS6ST3Q8IZP7 471 aa9.2□□□□□ -0.94
HERC6-208ENST00000515365 RNF25Q96BH1 459 aaPredicted RBP9.2□□□□□ -0.94
HERC6-208ENST00000515365 TSHZ2Q9NRE2 1034 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms