RNA–Protein interactions for RNA: ENST00000515160.5

CAST-243, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 617 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-243ENST00000515160 NOVA2Q9UNW9 492 aaKnown RBP9.12□□□□□ -0.95
CAST-243ENST00000515160 CFTRP13569 1480 aa9.12□□□□□ -0.95
CAST-243ENST00000515160 SKIP12755 728 aa9.11□□□□□ -0.95
CAST-243ENST00000515160 TMEM164Q5U3C3 297 aa9.11□□□□□ -0.95
CAST-243ENST00000515160 FKBPLQ9UIM3 349 aa9.11□□□□□ -0.95
CAST-243ENST00000515160 SLC27A5Q9Y2P5 690 aa9.11□□□□□ -0.95
CAST-243ENST00000515160 PUS10Q3MIT2 529 aaKnown RBP9.1□□□□□ -0.95
CAST-243ENST00000515160 PLEKHM2Q8IWE5 1019 aa9.1□□□□□ -0.95
CAST-243ENST00000515160 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
CAST-243ENST00000515160 ZC3H4Q9UPT8 1303 aaKnown RBP9.09□□□□□ -0.95
CAST-243ENST00000515160 USP17L5A8MUK1 530 aa9.09□□□□□ -0.95
CAST-243ENST00000515160 ACTN4O43707 911 aaKnown RBP9.09□□□□□ -0.95
CAST-243ENST00000515160 TXNDC2Q86VQ3 553 aa9.09□□□□□ -0.95
CAST-243ENST00000515160 WIZO95785 1651 aa9.09□□□□□ -0.95
CAST-243ENST00000515160 PPP4CP60510 307 aa9.08□□□□□ -0.96
CAST-243ENST00000515160 PDZRN3Q9UPQ7 1066 aa9.08□□□□□ -0.96
CAST-243ENST00000515160 FAM196BA6NMK8 535 aa9.07□□□□□ -0.96
CAST-243ENST00000515160 ZNF592Q92610 1267 aa9.07□□□□□ -0.96
CAST-243ENST00000515160 USB1Q9BQ65 265 aaKnown RBP9.07□□□□□ -0.96
CAST-243ENST00000515160 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
CAST-243ENST00000515160 CHD1O14646 1710 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L15C9J2P7 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L10C9JJH3 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L13C9JLJ4 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L12C9JPN9 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L11C9JVI0 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L21D6R901 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L18D6R9N7 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L22D6RA61 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L17D6RBQ6 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L19D6RCP7 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L20D6RJB6 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 ARID4AP29374 1257 aaPredicted RBP9.06□□□□□ -0.96
CAST-243ENST00000515160 USP17L24Q0WX57 530 aa9.06□□□□□ -0.96
CAST-243ENST00000515160 LARP1Q6PKG0 1096 aaKnown RBP9.06□□□□□ -0.96
CAST-243ENST00000515160 MKRN1Q9UHC7 482 aaKnown RBP9.06□□□□□ -0.96
CAST-243ENST00000515160 IGSF3O75054 1194 aa9.05□□□□□ -0.96
CAST-243ENST00000515160 F12P00748 615 aaPredicted RBP9.05□□□□□ -0.96
CAST-243ENST00000515160 PHLDB3Q6NSJ2 640 aa9.05□□□□□ -0.96
CAST-243ENST00000515160 RNF19BQ6ZMZ0 732 aa9.05□□□□□ -0.96
CAST-243ENST00000515160 DEPDC4Q8N2C3 294 aa9.05□□□□□ -0.96
CAST-243ENST00000515160 FAM174AQ8TBP5 190 aa9.05□□□□□ -0.96
CAST-243ENST00000515160 FAM200AQ8TCP9 573 aa9.05□□□□□ -0.96
CAST-243ENST00000515160 IFT140Q96RY7 1462 aa9.04□□□□□ -0.96
CAST-243ENST00000515160 SSFA2P28290 1259 aa9.04□□□□□ -0.96
CAST-243ENST00000515160 SLFNL1Q499Z3 407 aa9.04□□□□□ -0.96
CAST-243ENST00000515160 BLOC1S3Q6QNY0 202 aa9.04□□□□□ -0.96
CAST-243ENST00000515160 IL21Q9HBE4 155 aa9.04□□□□□ -0.96
CAST-243ENST00000515160 SALL2Q9Y467 1007 aaPredicted RBP9.04□□□□□ -0.96
CAST-243ENST00000515160 RSF1Q96T23 1441 aaPredicted RBP9.04□□□□□ -0.96
CAST-243ENST00000515160 EIF4G3O43432 1585 aaKnown RBP9.03□□□□□ -0.96
CAST-243ENST00000515160 ATP5J2-PTCD1G3V325 749 aa9.03□□□□□ -0.96
CAST-243ENST00000515160 ERCC3P19447 782 aa9.03□□□□□ -0.96
CAST-243ENST00000515160 RASA1P20936 1047 aa9.03□□□□□ -0.96
CAST-243ENST00000515160 MCCD1P59942 119 aaPredicted RBP9.03□□□□□ -0.96
CAST-243ENST00000515160 CRTC2Q53ET0 693 aaPredicted RBP9.03□□□□□ -0.96
CAST-243ENST00000515160 PPP1R18Q6NYC8 613 aa9.03□□□□□ -0.96
CAST-243ENST00000515160 CDCA7Q9BWT1 371 aaPredicted RBP9.03□□□□□ -0.96
CAST-243ENST00000515160 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.03□□□□□ -0.96
CAST-243ENST00000515160 MAP10Q9P2G4 905 aa9.03□□□□□ -0.96
CAST-243ENST00000515160 CEP126Q9P2H0 1117 aa9.03□□□□□ -0.96
CAST-243ENST00000515160 RBM47A0AV96 593 aaKnown RBP9.02□□□□□ -0.97
CAST-243ENST00000515160 LZTS3O60299 673 aaPredicted RBP9.02□□□□□ -0.97
CAST-243ENST00000515160 CTHP32929 405 aa9.02□□□□□ -0.97
CAST-243ENST00000515160 PTK7Q13308 1070 aa9.02□□□□□ -0.97
CAST-243ENST00000515160 NCOA4Q13772 614 aa9.02□□□□□ -0.97
CAST-243ENST00000515160 PTPRNQ16849 979 aa9.02□□□□□ -0.97
CAST-243ENST00000515160 TJAP1Q5JTD0 557 aa9.02□□□□□ -0.97
CAST-243ENST00000515160 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
CAST-243ENST00000515160 GPSM3Q9Y4H4 160 aa9.02□□□□□ -0.97
CAST-243ENST00000515160 FMNL1O95466 1100 aaPredicted RBP9.01□□□□□ -0.97
CAST-243ENST00000515160 JUNDP17535 347 aa9.01□□□□□ -0.97
CAST-243ENST00000515160 GGCXP38435 758 aa9.01□□□□□ -0.97
CAST-243ENST00000515160 PTK2Q05397 1052 aa9.01□□□□□ -0.97
CAST-243ENST00000515160 RNF135Q8IUD6 432 aa9.01□□□□□ -0.97
CAST-243ENST00000515160 CLP1Q92989 425 aaKnown RBP9.01□□□□□ -0.97
CAST-243ENST00000515160 LOC105371045A0A1W2PR82 267 aa9□□□□□ -0.97
CAST-243ENST00000515160 ANKMY2Q8IV38 441 aa9□□□□□ -0.97
CAST-243ENST00000515160 PLPP7Q8NBV4 271 aa9□□□□□ -0.97
CAST-243ENST00000515160 ARMC2Q8NEN0 867 aa9□□□□□ -0.97
CAST-243ENST00000515160 PCDHB9Q9Y5E1 797 aa9□□□□□ -0.97
CAST-243ENST00000515160 UNCXA6NJT0 531 aa8.99□□□□□ -0.97
CAST-243ENST00000515160 FAM69CQ0P6D2 419 aa8.99□□□□□ -0.97
CAST-243ENST00000515160 PDXDC2PQ6P474 469 aa8.99□□□□□ -0.97
CAST-243ENST00000515160 GPKOWQ92917 476 aaPredicted RBP eCLIP8.99□□□□□ -0.97
CAST-243ENST00000515160 SOWAHDA6NJG2 315 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 ATP2B4P23634 1241 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 EML3Q32P44 896 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 SCUBE3Q8IX30 993 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 PHTF2Q8N3S3 785 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 MTRQ99707 1265 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 SLAIN2Q9P270 581 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 CLASP1Q7Z460 1538 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 TOPBP1Q92547 1522 aa8.98□□□□□ -0.97
CAST-243ENST00000515160 TARBP1Q13395 1621 aaKnown RBP8.98□□□□□ -0.97
CAST-243ENST00000515160 PRDM2Q13029 1718 aa8.97□□□□□ -0.97
CAST-243ENST00000515160 AQRO60306 1485 aaKnown RBP eCLIP8.97□□□□□ -0.97
CAST-243ENST00000515160 NR1I2O75469 434 aa8.97□□□□□ -0.97
CAST-243ENST00000515160 SWI5Q1ZZU3 235 aa8.97□□□□□ -0.97
CAST-243ENST00000515160 MAP7D1Q3KQU3 841 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 322.9 ms