RNA–Protein interactions for RNA: ENST00000514099.5

GRAMD2B-215, Transcript of GRAM domain containing 2B, humanhuman

TSL 2

Gene GRAMD2B, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2B-215ENST00000514099 GGNBP2Q9H3C7 697 aa29.13■■■□□ 2.25
GRAMD2B-215ENST00000514099 AXIN2Q9Y2T1 843 aa29.1■■■□□ 2.25
GRAMD2B-215ENST00000514099 LARP1Q6PKG0 1096 aaKnown RBP29.1■■■□□ 2.25
GRAMD2B-215ENST00000514099 EVA1CP58658 441 aa29.09■■■□□ 2.25
GRAMD2B-215ENST00000514099 SPATA31A1Q5TZJ5 1347 aa29.08■■■□□ 2.25
GRAMD2B-215ENST00000514099 PANK3Q9H999 370 aa29.08■■■□□ 2.25
GRAMD2B-215ENST00000514099 BRWD3Q6RI45 1802 aa29.08■■■□□ 2.25
GRAMD2B-215ENST00000514099 EP400Q96L91 3159 aa29.08■■■□□ 2.25
GRAMD2B-215ENST00000514099 THSD7AQ9UPZ6 1657 aa29.07■■■□□ 2.24
GRAMD2B-215ENST00000514099 FAM98CQ17RN3 349 aaKnown RBP29.06■■■□□ 2.24
GRAMD2B-215ENST00000514099 CCDC7Q96M83 1385 aa29.05■■■□□ 2.24
GRAMD2B-215ENST00000514099 ONECUT3O60422 494 aaPredicted RBP29.04■■■□□ 2.24
GRAMD2B-215ENST00000514099 FBLN1P23142 703 aa29.04■■■□□ 2.24
GRAMD2B-215ENST00000514099 USP35Q9P2H5 1018 aa29.04■■■□□ 2.24
GRAMD2B-215ENST00000514099 CGNL1Q0VF96 1302 aa29.04■■■□□ 2.24
GRAMD2B-215ENST00000514099 CRB1P82279 1406 aa29.04■■■□□ 2.24
GRAMD2B-215ENST00000514099 SEPT12Q8IYM1 358 aa29.04■■■□□ 2.24
GRAMD2B-215ENST00000514099 ANKRD26Q9UPS8 1709 aa29.03■■■□□ 2.24
GRAMD2B-215ENST00000514099 WASHC2AQ641Q2 1341 aa29.03■■■□□ 2.24
GRAMD2B-215ENST00000514099 WDR17Q8IZU2 1322 aa29.02■■■□□ 2.24
GRAMD2B-215ENST00000514099 MAP3K19Q56UN5 1328 aa29.01■■■□□ 2.23
GRAMD2B-215ENST00000514099 A0A0G2JS52 829 aa29■■■□□ 2.23
GRAMD2B-215ENST00000514099 MYT1Q01538 1121 aa29■■■□□ 2.23
GRAMD2B-215ENST00000514099 BLMP54132 1417 aaPredicted RBP28.98■■■□□ 2.23
GRAMD2B-215ENST00000514099 ERBB3P21860 1342 aa28.98■■■□□ 2.23
GRAMD2B-215ENST00000514099 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
GRAMD2B-215ENST00000514099 RRS1Q15050 365 aaKnown RBP28.97■■■□□ 2.23
GRAMD2B-215ENST00000514099 TOM1L2Q6ZVM7 507 aa28.97■■■□□ 2.23
GRAMD2B-215ENST00000514099 TCP11L2Q8N4U5 519 aa28.97■■■□□ 2.23
GRAMD2B-215ENST00000514099 PEAK1Q9H792 1746 aa28.96■■■□□ 2.23
GRAMD2B-215ENST00000514099 CSB-PGBD3P0DP91 1061 aa28.95■■■□□ 2.23
GRAMD2B-215ENST00000514099 BARGINQ6ZT62 677 aa28.94■■■□□ 2.22
GRAMD2B-215ENST00000514099 IP6K1Q92551 441 aa28.94■■■□□ 2.22
GRAMD2B-215ENST00000514099 RTL1A6NKG5 1358 aa28.94■■■□□ 2.22
GRAMD2B-215ENST00000514099 HOXC9P31274 260 aa28.93■■■□□ 2.22
GRAMD2B-215ENST00000514099 PARP4Q9UKK3 1724 aaKnown RBP28.92■■■□□ 2.22
GRAMD2B-215ENST00000514099 AMPHP49418 695 aa28.92■■■□□ 2.22
GRAMD2B-215ENST00000514099 ANKRD24Q8TF21 1146 aa28.92■■■□□ 2.22
GRAMD2B-215ENST00000514099 THRAP3Q9Y2W1 955 aaKnown RBP28.92■■■□□ 2.22
GRAMD2B-215ENST00000514099 NSD2O96028 1365 aa28.92■■■□□ 2.22
GRAMD2B-215ENST00000514099 FAM208AQ9UK61 1670 aaKnown RBP28.91■■■□□ 2.22
GRAMD2B-215ENST00000514099 UPF1Q92900 1129 aaKnown RBP eCLIP28.91■■■□□ 2.22
GRAMD2B-215ENST00000514099 KRT27Q7Z3Y8 459 aa28.9■■■□□ 2.22
GRAMD2B-215ENST00000514099 KNSTRNQ9Y448 316 aa28.9■■■□□ 2.22
GRAMD2B-215ENST00000514099 LRRC37A3O60309 1634 aa28.9■■■□□ 2.22
GRAMD2B-215ENST00000514099 CARD10Q9BWT7 1032 aa28.89■■■□□ 2.22
GRAMD2B-215ENST00000514099 EMILIN1Q9Y6C2 1016 aa28.88■■■□□ 2.21
GRAMD2B-215ENST00000514099 LTV1Q96GA3 475 aaPredicted RBP28.87■■■□□ 2.21
GRAMD2B-215ENST00000514099 MAP2P11137 1827 aaKnown RBP28.87■■■□□ 2.21
GRAMD2B-215ENST00000514099 FLT4P35916 1363 aa28.86■■■□□ 2.21
GRAMD2B-215ENST00000514099 AMER1Q5JTC6 1135 aaPredicted RBP28.86■■■□□ 2.21
GRAMD2B-215ENST00000514099 DISP2A7MBM2 1401 aa28.86■■■□□ 2.21
GRAMD2B-215ENST00000514099 KIF24Q5T7B8 1368 aa28.86■■■□□ 2.21
GRAMD2B-215ENST00000514099 PER1O15534 1290 aaPredicted RBP28.85■■■□□ 2.21
GRAMD2B-215ENST00000514099 TNNT2P45379 298 aaPredicted RBP28.85■■■□□ 2.21
GRAMD2B-215ENST00000514099 NLRP2Q9NX02 1062 aa28.85■■■□□ 2.21
GRAMD2B-215ENST00000514099 RGPD2P0DJD1 1756 aa28.84■■■□□ 2.21
GRAMD2B-215ENST00000514099 FAM182BQ5T319 152 aa28.83■■■□□ 2.21
GRAMD2B-215ENST00000514099 HSP90AB2PQ58FF8 381 aa28.82■■■□□ 2.2
GRAMD2B-215ENST00000514099 INSRP06213 1382 aa28.82■■■□□ 2.2
GRAMD2B-215ENST00000514099 ZEB1P37275 1124 aaPredicted RBP28.81■■■□□ 2.2
GRAMD2B-215ENST00000514099 PPM1GO15355 546 aaPredicted RBP28.79■■■□□ 2.2
GRAMD2B-215ENST00000514099 MORC1Q86VD1 984 aa28.79■■■□□ 2.2
GRAMD2B-215ENST00000514099 POLKQ9UBT6 870 aa28.79■■■□□ 2.2
GRAMD2B-215ENST00000514099 SMG6Q86US8 1419 aaKnown RBP28.79■■■□□ 2.2
GRAMD2B-215ENST00000514099 PDE3BQ13370 1112 aa28.76■■■□□ 2.19
GRAMD2B-215ENST00000514099 CDCA7Q9BWT1 371 aaPredicted RBP28.76■■■□□ 2.19
GRAMD2B-215ENST00000514099 DDB1Q16531 1140 aa28.75■■■□□ 2.19
GRAMD2B-215ENST00000514099 TNS2Q63HR2 1409 aa28.75■■■□□ 2.19
GRAMD2B-215ENST00000514099 CC2D1BQ5T0F9 858 aaKnown RBP28.74■■■□□ 2.19
GRAMD2B-215ENST00000514099 NPC1L1Q9UHC9 1359 aa28.72■■■□□ 2.19
GRAMD2B-215ENST00000514099 IL2RBP14784 551 aa28.72■■■□□ 2.19
GRAMD2B-215ENST00000514099 NBPF6Q5VWK0 638 aa28.72■■■□□ 2.19
GRAMD2B-215ENST00000514099 NBPF4Q96M43 638 aa28.72■■■□□ 2.19
GRAMD2B-215ENST00000514099 USHBP1Q8N6Y0 703 aa28.7■■■□□ 2.19
GRAMD2B-215ENST00000514099 RGPD1P0DJD0 1748 aa28.7■■■□□ 2.18
GRAMD2B-215ENST00000514099 OVOS2A0A0G2JMS6 1433 aa28.7■■■□□ 2.18
GRAMD2B-215ENST00000514099 MEGF6O75095 1541 aa28.69■■■□□ 2.18
GRAMD2B-215ENST00000514099 TNS1Q9HBL0 1735 aaKnown RBP28.69■■■□□ 2.18
GRAMD2B-215ENST00000514099 CNGB1Q14028 1251 aaPredicted RBP28.69■■■□□ 2.18
GRAMD2B-215ENST00000514099 FAM196AQ6ZSG2 479 aa28.68■■■□□ 2.18
GRAMD2B-215ENST00000514099 CCDC125Q86Z20 511 aa28.67■■■□□ 2.18
GRAMD2B-215ENST00000514099 MARCH10Q8NA82 808 aaPredicted RBP28.66■■■□□ 2.18
GRAMD2B-215ENST00000514099 EXOC5O00471 708 aa28.65■■■□□ 2.18
GRAMD2B-215ENST00000514099 NCAPD2Q15021 1401 aa28.65■■■□□ 2.18
GRAMD2B-215ENST00000514099 SHANK3Q9BYB0 1731 aa28.64■■■□□ 2.18
GRAMD2B-215ENST00000514099 EIF4A2Q14240 407 aaKnown RBP28.64■■■□□ 2.17
GRAMD2B-215ENST00000514099 SBF2Q86WG5 1849 aa28.62■■■□□ 2.17
GRAMD2B-215ENST00000514099 TRIM37O94972 964 aa28.61■■■□□ 2.17
GRAMD2B-215ENST00000514099 SF3B2Q13435 895 aaKnown RBP28.6■■■□□ 2.17
GRAMD2B-215ENST00000514099 EYA1Q99502 592 aa28.6■■■□□ 2.17
GRAMD2B-215ENST00000514099 DEFB132Q7Z7B7 95 aa28.59■■■□□ 2.17
GRAMD2B-215ENST00000514099 BCL9O00512 1426 aa28.58■■■□□ 2.17
GRAMD2B-215ENST00000514099 MTHFSP49914 203 aa28.58■■■□□ 2.17
GRAMD2B-215ENST00000514099 RAPGEF4Q8WZA2 1011 aa28.57■■■□□ 2.16
GRAMD2B-215ENST00000514099 PKD1L3Q7Z443 1732 aa28.55■■■□□ 2.16
GRAMD2B-215ENST00000514099 IGSF1Q8N6C5 1336 aa28.54■■■□□ 2.16
GRAMD2B-215ENST00000514099 TATP17735 454 aaPredicted RBP28.53■■■□□ 2.16
GRAMD2B-215ENST00000514099 BAG6P46379 1132 aa28.53■■■□□ 2.16
GRAMD2B-215ENST00000514099 ZCRB1Q8TBF4 217 aaKnown RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms