RNA–Protein interactions for RNA: ENST00000514030.1

SNX2-212, Transcript of sorting nexin 2, humanhuman

TSL 3

Gene SNX2, Length 823 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-212ENST00000514030 DNMT3LQ9UJW3 386 aa9.93□□□□□ -0.82
SNX2-212ENST00000514030 ZC3H4Q9UPT8 1303 aaKnown RBP9.92□□□□□ -0.82
SNX2-212ENST00000514030 PDXDC2PQ6P474 469 aa9.92□□□□□ -0.82
SNX2-212ENST00000514030 ATP1B4Q9UN42 357 aaPredicted RBP9.92□□□□□ -0.82
SNX2-212ENST00000514030 TTLL8A6PVC2 850 aa9.91□□□□□ -0.82
SNX2-212ENST00000514030 DHX9Q08211 1270 aaKnown RBP9.91□□□□□ -0.82
SNX2-212ENST00000514030 ZBTB33Q86T24 672 aa9.91□□□□□ -0.82
SNX2-212ENST00000514030 CTDSPL2Q05D32 466 aa9.9□□□□□ -0.82
SNX2-212ENST00000514030 PPP1R26Q5T8A7 1209 aaPredicted RBP9.9□□□□□ -0.82
SNX2-212ENST00000514030 FKBPLQ9UIM3 349 aa9.9□□□□□ -0.82
SNX2-212ENST00000514030 PNMA1Q8ND90 353 aa9.89□□□□□ -0.83
SNX2-212ENST00000514030 KCTD15Q96SI1 283 aaPredicted RBP9.88□□□□□ -0.83
SNX2-212ENST00000514030 PTK2Q05397 1052 aa9.86□□□□□ -0.83
SNX2-212ENST00000514030 SKIV2LQ15477 1246 aaKnown RBP9.86□□□□□ -0.83
SNX2-212ENST00000514030 Q6ZVU0 165 aa9.86□□□□□ -0.83
SNX2-212ENST00000514030 SPINT1O43278 529 aa9.85□□□□□ -0.83
SNX2-212ENST00000514030 PTSQ03393 145 aa9.85□□□□□ -0.83
SNX2-212ENST00000514030 CBLBQ13191 982 aa9.85□□□□□ -0.83
SNX2-212ENST00000514030 NBPF20Q3BBV1 942 aa9.85□□□□□ -0.83
SNX2-212ENST00000514030 SH3D19Q5HYK7 790 aa9.85□□□□□ -0.83
SNX2-212ENST00000514030 LRRN4Q8WUT4 740 aa9.85□□□□□ -0.83
SNX2-212ENST00000514030 DDRGK1Q96HY6 314 aa9.85□□□□□ -0.83
SNX2-212ENST00000514030 NR6A1Q15406 480 aa9.84□□□□□ -0.83
SNX2-212ENST00000514030 GPSM3Q9Y4H4 160 aa9.84□□□□□ -0.83
SNX2-212ENST00000514030 FIGNL2A6NMB9 653 aa9.83□□□□□ -0.84
SNX2-212ENST00000514030 INTS6LQ5JSJ4 861 aaKnown RBP9.82□□□□□ -0.84
SNX2-212ENST00000514030 RNF225M0QZC1 329 aaPredicted RBP9.81□□□□□ -0.84
SNX2-212ENST00000514030 AP1G2O75843 785 aa9.81□□□□□ -0.84
SNX2-212ENST00000514030 PPP2R2DQ66LE6 453 aa9.81□□□□□ -0.84
SNX2-212ENST00000514030 CCDC155Q8N6L0 562 aa9.81□□□□□ -0.84
SNX2-212ENST00000514030 TRIM52Q96A61 297 aa9.81□□□□□ -0.84
SNX2-212ENST00000514030 CNTNAP3BQ96NU0 1288 aa9.8□□□□□ -0.84
SNX2-212ENST00000514030 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.8□□□□□ -0.84
SNX2-212ENST00000514030 CNTNAP3Q9BZ76 1288 aa9.8□□□□□ -0.84
SNX2-212ENST00000514030 POLMQ9NP87 494 aaPredicted RBP9.8□□□□□ -0.84
SNX2-212ENST00000514030 RELBQ01201 579 aa9.79□□□□□ -0.84
SNX2-212ENST00000514030 ADAM32Q8TC27 787 aa9.79□□□□□ -0.84
SNX2-212ENST00000514030 NANOS1Q8WY41 292 aaKnown RBP9.79□□□□□ -0.84
SNX2-212ENST00000514030 KDM4CQ9H3R0 1056 aa9.79□□□□□ -0.84
SNX2-212ENST00000514030 CDC14CA4D256 554 aa9.77□□□□□ -0.85
SNX2-212ENST00000514030 KCNMA1Q12791 1236 aa9.77□□□□□ -0.85
SNX2-212ENST00000514030 DZIP3Q86Y13 1208 aaKnown RBP9.77□□□□□ -0.85
SNX2-212ENST00000514030 AGBL1Q96MI9 1066 aa9.77□□□□□ -0.85
SNX2-212ENST00000514030 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
SNX2-212ENST00000514030 SLC35F4A4IF30 521 aa9.76□□□□□ -0.85
SNX2-212ENST00000514030 RAB15P59190 212 aa9.76□□□□□ -0.85
SNX2-212ENST00000514030 PROCA1Q8NCQ7 364 aaPredicted RBP9.76□□□□□ -0.85
SNX2-212ENST00000514030 INSM2Q96T92 566 aaPredicted RBP9.76□□□□□ -0.85
SNX2-212ENST00000514030 USP17L8P0C7I0 530 aa9.75□□□□□ -0.85
SNX2-212ENST00000514030 ITGA6P23229 1130 aa9.75□□□□□ -0.85
SNX2-212ENST00000514030 CTSOP43234 321 aaPredicted RBP9.75□□□□□ -0.85
SNX2-212ENST00000514030 KRT76Q01546 638 aa9.75□□□□□ -0.85
SNX2-212ENST00000514030 SV2AQ7L0J3 742 aa9.75□□□□□ -0.85
SNX2-212ENST00000514030 SVOPQ8N4V2 548 aa9.75□□□□□ -0.85
SNX2-212ENST00000514030 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
SNX2-212ENST00000514030 GPBP1L1Q9HC44 474 aaPredicted RBP9.75□□□□□ -0.85
SNX2-212ENST00000514030 ADH1AP07327 375 aa9.74□□□□□ -0.85
SNX2-212ENST00000514030 FAM117AQ9C073 453 aa9.74□□□□□ -0.85
SNX2-212ENST00000514030 ZNF784Q8NCA9 323 aaPredicted RBP9.73□□□□□ -0.85
SNX2-212ENST00000514030 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
SNX2-212ENST00000514030 OCSTAMPQ9BR26 566 aa9.73□□□□□ -0.85
SNX2-212ENST00000514030 ZNF395Q9H8N7 513 aaPredicted RBP9.73□□□□□ -0.85
SNX2-212ENST00000514030 TMPRSS4Q9NRS4 437 aa9.72□□□□□ -0.85
SNX2-212ENST00000514030 FBXO31Q5XUX0 539 aaPredicted RBP9.71□□□□□ -0.86
SNX2-212ENST00000514030 SEPT12Q8IYM1 358 aa9.71□□□□□ -0.86
SNX2-212ENST00000514030 VWA5B2Q8N398 1253 aa9.71□□□□□ -0.86
SNX2-212ENST00000514030 TMEM151AQ8N4L1 468 aa9.71□□□□□ -0.86
SNX2-212ENST00000514030 ADAMTS8Q9UP79 889 aa9.71□□□□□ -0.86
SNX2-212ENST00000514030 LOC100996750A0A140TA64 210 aa9.7□□□□□ -0.86
SNX2-212ENST00000514030 ERVH48-1M5A8F1 160 aa9.7□□□□□ -0.86
SNX2-212ENST00000514030 KRTAP4-6Q9BYQ5 205 aa9.7□□□□□ -0.86
SNX2-212ENST00000514030 HMX1Q9NP08 348 aaPredicted RBP9.7□□□□□ -0.86
SNX2-212ENST00000514030 RNFT1Q5M7Z0 435 aa9.69□□□□□ -0.86
SNX2-212ENST00000514030 ZNF385CQ66K41 422 aaPredicted RBP9.69□□□□□ -0.86
SNX2-212ENST00000514030 EPS8L1Q8TE68 723 aa9.69□□□□□ -0.86
SNX2-212ENST00000514030 GDF11O95390 407 aa9.68□□□□□ -0.86
SNX2-212ENST00000514030 RFC5P40937 340 aa9.68□□□□□ -0.86
SNX2-212ENST00000514030 PTGIRP43119 386 aa9.68□□□□□ -0.86
SNX2-212ENST00000514030 LYSMD3Q7Z3D4 306 aa9.68□□□□□ -0.86
SNX2-212ENST00000514030 ESPNB1AK53 854 aa9.67□□□□□ -0.86
SNX2-212ENST00000514030 RASSF7Q02833 373 aa9.67□□□□□ -0.86
SNX2-212ENST00000514030 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
SNX2-212ENST00000514030 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
SNX2-212ENST00000514030 LILRA1O75019 489 aa9.66□□□□□ -0.86
SNX2-212ENST00000514030 SLURP2P0DP57 97 aa9.66□□□□□ -0.86
SNX2-212ENST00000514030 PCMTD1Q96MG8 357 aaPredicted RBP9.66□□□□□ -0.86
SNX2-212ENST00000514030 MARSP56192 900 aaKnown RBP9.65□□□□□ -0.86
SNX2-212ENST00000514030 MAP3K10Q02779 954 aa9.65□□□□□ -0.86
SNX2-212ENST00000514030 CYLDQ9NQC7 956 aa9.65□□□□□ -0.86
SNX2-212ENST00000514030 SENP3-EIF4A1A0A087X0R7 540 aa9.64□□□□□ -0.87
SNX2-212ENST00000514030 ADD1P35611 737 aaKnown RBP9.64□□□□□ -0.87
SNX2-212ENST00000514030 TMEM259Q4ZIN3 620 aa9.64□□□□□ -0.87
SNX2-212ENST00000514030 CCDC125Q86Z20 511 aa9.64□□□□□ -0.87
SNX2-212ENST00000514030 ATP5J2-PTCD1G3V325 749 aa9.63□□□□□ -0.87
SNX2-212ENST00000514030 GSK3AP49840 483 aa9.63□□□□□ -0.87
SNX2-212ENST00000514030 ZNF592Q92610 1267 aa9.63□□□□□ -0.87
SNX2-212ENST00000514030 PCDHB9Q9Y5E1 797 aa9.63□□□□□ -0.87
SNX2-212ENST00000514030 ZBBXA8MT70 800 aa9.62□□□□□ -0.87
SNX2-212ENST00000514030 FOXR1Q6PIV2 292 aa9.62□□□□□ -0.87
SNX2-212ENST00000514030 SCARF2Q96GP6 870 aaPredicted RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms