RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ANO8Q9HCE9 1232 aaPredicted RBP13.29□□□□□ -0.28
CAST-239ENST00000513666 ARHGEF28Q8N1W1 1705 aaKnown RBP13.29□□□□□ -0.28
CAST-239ENST00000513666 USP19O94966 1318 aa13.29□□□□□ -0.28
CAST-239ENST00000513666 MYOM1P52179 1685 aa13.29□□□□□ -0.28
CAST-239ENST00000513666 COL5A2P05997 1499 aaPredicted RBP13.28□□□□□ -0.28
CAST-239ENST00000513666 ACEP12821 1306 aa13.27□□□□□ -0.28
CAST-239ENST00000513666 LRRC37A3O60309 1634 aa13.27□□□□□ -0.29
CAST-239ENST00000513666 CRB1P82279 1406 aa13.27□□□□□ -0.29
CAST-239ENST00000513666 AKT1S1Q96B36 256 aa13.27□□□□□ -0.29
CAST-239ENST00000513666 SENP3-EIF4A1A0A087X0R7 540 aa13.26□□□□□ -0.29
CAST-239ENST00000513666 PTGER2P43116 358 aa13.26□□□□□ -0.29
CAST-239ENST00000513666 ABTB2Q8N961 1025 aa13.26□□□□□ -0.29
CAST-239ENST00000513666 PDGFDQ9GZP0 370 aaPredicted RBP13.26□□□□□ -0.29
CAST-239ENST00000513666 CHD4Q14839 1912 aa13.26□□□□□ -0.29
CAST-239ENST00000513666 PLEKHG3A1L390 1219 aa13.25□□□□□ -0.29
CAST-239ENST00000513666 ZBTB7AO95365 584 aa13.25□□□□□ -0.29
CAST-239ENST00000513666 CDK19Q9BWU1 502 aa13.25□□□□□ -0.29
CAST-239ENST00000513666 BCL11BQ9C0K0 894 aaPredicted RBP13.25□□□□□ -0.29
CAST-239ENST00000513666 GCP02774 474 aa13.24□□□□□ -0.29
CAST-239ENST00000513666 PROM2Q8N271 834 aa13.24□□□□□ -0.29
CAST-239ENST00000513666 CCDC61Q9Y6R9 512 aa13.24□□□□□ -0.29
CAST-239ENST00000513666 DDB1Q16531 1140 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 PTF1AQ7RTS3 328 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 NLRP13Q86W25 1043 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 KDM2AQ9Y2K7 1162 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 C1QTNF8P60827 252 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 DCAF11Q8TEB1 546 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 STAC3Q96MF2 364 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 SYT17Q9BSW7 474 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 FHDC1Q9C0D6 1143 aaPredicted RBP13.23□□□□□ -0.29
CAST-239ENST00000513666 BCL9O00512 1426 aa13.23□□□□□ -0.29
CAST-239ENST00000513666 WNK3Q9BYP7 1800 aa13.22□□□□□ -0.29
CAST-239ENST00000513666 AKAP12Q02952 1782 aa13.21□□□□□ -0.29
CAST-239ENST00000513666 AATKQ6ZMQ8 1374 aa13.21□□□□□ -0.29
CAST-239ENST00000513666 STK32BQ9NY57 414 aa13.21□□□□□ -0.29
CAST-239ENST00000513666 SLC15A2Q16348 729 aa13.2□□□□□ -0.3
CAST-239ENST00000513666 IFFO2Q5TF58 517 aa13.2□□□□□ -0.3
CAST-239ENST00000513666 MARCH10Q8NA82 808 aaPredicted RBP13.2□□□□□ -0.3
CAST-239ENST00000513666 BRD4O60885 1362 aaPredicted RBP13.19□□□□□ -0.3
CAST-239ENST00000513666 TXNRD1Q16881 649 aa13.19□□□□□ -0.3
CAST-239ENST00000513666 SGIP1Q9BQI5 828 aa13.19□□□□□ -0.3
CAST-239ENST00000513666 MTFR1LQ9H019 292 aa13.19□□□□□ -0.3
CAST-239ENST00000513666 SLIT3O75094 1523 aa13.19□□□□□ -0.3
CAST-239ENST00000513666 COL18A1P39060 1754 aa13.19□□□□□ -0.3
CAST-239ENST00000513666 TOM1L2Q6ZVM7 507 aa13.18□□□□□ -0.3
CAST-239ENST00000513666 CDCA7Q9BWT1 371 aaPredicted RBP13.18□□□□□ -0.3
CAST-239ENST00000513666 ZBTB7CA1YPR0 619 aa13.18□□□□□ -0.3
CAST-239ENST00000513666 UTRNP46939 3433 aa13.17□□□□□ -0.3
CAST-239ENST00000513666 PPIP5K1Q6PFW1 1433 aa13.17□□□□□ -0.3
CAST-239ENST00000513666 MAP3K5Q99683 1374 aa13.17□□□□□ -0.3
CAST-239ENST00000513666 WDR17Q8IZU2 1322 aa13.17□□□□□ -0.3
CAST-239ENST00000513666 MKRN4PQ13434 485 aaPredicted RBP13.17□□□□□ -0.3
CAST-239ENST00000513666 NLRP6P59044 892 aa13.15□□□□□ -0.3
CAST-239ENST00000513666 ARXQ96QS3 562 aa13.15□□□□□ -0.3
CAST-239ENST00000513666 USP6P35125 1406 aa13.14□□□□□ -0.31
CAST-239ENST00000513666 CHRDL2Q6WN34 429 aa13.14□□□□□ -0.31
CAST-239ENST00000513666 AXIN2Q9Y2T1 843 aa13.14□□□□□ -0.31
CAST-239ENST00000513666 PAPPAQ13219 1627 aa13.14□□□□□ -0.31
CAST-239ENST00000513666 KIAA1210Q9ULL0 1709 aa13.14□□□□□ -0.31
CAST-239ENST00000513666 SRPK2P78362 688 aaKnown RBP13.13□□□□□ -0.31
CAST-239ENST00000513666 RAB3GAP2Q9H2M9 1393 aa13.13□□□□□ -0.31
CAST-239ENST00000513666 PIK3C2AO00443 1686 aa13.13□□□□□ -0.31
CAST-239ENST00000513666 NHSQ6T4R5 1651 aa13.13□□□□□ -0.31
CAST-239ENST00000513666 CPSF1Q10570 1443 aaKnown RBP13.13□□□□□ -0.31
CAST-239ENST00000513666 CARD10Q9BWT7 1032 aa13.13□□□□□ -0.31
CAST-239ENST00000513666 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
CAST-239ENST00000513666 EXOC5O00471 708 aa13.12□□□□□ -0.31
CAST-239ENST00000513666 GIGYF1O75420 1035 aaPredicted RBP13.12□□□□□ -0.31
CAST-239ENST00000513666 REM2Q8IYK8 340 aaPredicted RBP13.12□□□□□ -0.31
CAST-239ENST00000513666 QRICH2Q9H0J4 1663 aa13.11□□□□□ -0.31
CAST-239ENST00000513666 SPDYE2BA6NHP3 402 aa13.11□□□□□ -0.31
CAST-239ENST00000513666 SPDYE6P0CI01 402 aa13.11□□□□□ -0.31
CAST-239ENST00000513666 GPR162Q16538 588 aa13.11□□□□□ -0.31
CAST-239ENST00000513666 SPDYE2Q495Y8 402 aa13.11□□□□□ -0.31
CAST-239ENST00000513666 CABP2Q9NPB3 220 aa13.11□□□□□ -0.31
CAST-239ENST00000513666 TNS2Q63HR2 1409 aa13.11□□□□□ -0.31
CAST-239ENST00000513666 ARHGEF25Q86VW2 580 aa13.1□□□□□ -0.31
CAST-239ENST00000513666 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
CAST-239ENST00000513666 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
CAST-239ENST00000513666 CABP1Q9NZU7 370 aa13.09□□□□□ -0.31
CAST-239ENST00000513666 CSB-PGBD3P0DP91 1061 aa13.08□□□□□ -0.31
CAST-239ENST00000513666 SHANK3Q9BYB0 1731 aa13.08□□□□□ -0.32
CAST-239ENST00000513666 CENPJQ9HC77 1338 aaPredicted RBP13.08□□□□□ -0.32
CAST-239ENST00000513666 ABCC6O95255 1503 aa13.08□□□□□ -0.32
CAST-239ENST00000513666 ZNF827Q17R98 1081 aa13.08□□□□□ -0.32
CAST-239ENST00000513666 COL24A1Q17RW2 1714 aa13.08□□□□□ -0.32
CAST-239ENST00000513666 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
CAST-239ENST00000513666 CEP350Q5VT06 3117 aa13.07□□□□□ -0.32
CAST-239ENST00000513666 BTAF1O14981 1849 aa13.07□□□□□ -0.32
CAST-239ENST00000513666 QSER1Q2KHR3 1735 aa13.07□□□□□ -0.32
CAST-239ENST00000513666 NBPF1Q3BBV0 1214 aa13.07□□□□□ -0.32
CAST-239ENST00000513666 ACSBG1Q96GR2 724 aa13.07□□□□□ -0.32
CAST-239ENST00000513666 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
CAST-239ENST00000513666 NFAT5O94916 1531 aa13.06□□□□□ -0.32
CAST-239ENST00000513666 POLD1P28340 1107 aa13.04□□□□□ -0.32
CAST-239ENST00000513666 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
CAST-239ENST00000513666 LRRC4BQ9NT99 713 aa13.04□□□□□ -0.32
CAST-239ENST00000513666 TTC21BQ7Z4L5 1316 aa13.04□□□□□ -0.32
CAST-239ENST00000513666 SOX12O15370 315 aa13.03□□□□□ -0.32
CAST-239ENST00000513666 PELP1Q8IZL8 1130 aaKnown RBP13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms