RNA–Protein interactions for RNA: ENST00000513459.5

PACRGL-227, Transcript of parkin coregulated like, humanhuman

TSL 5 BASIC

Gene PACRGL, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-227ENST00000513459 SMG6Q86US8 1419 aaKnown RBP28.64■■■□□ 2.18
PACRGL-227ENST00000513459 CFAP53Q96M91 514 aa28.63■■■□□ 2.17
PACRGL-227ENST00000513459 AXIN2Q9Y2T1 843 aa28.63■■■□□ 2.17
PACRGL-227ENST00000513459 LTN1O94822 1766 aa28.63■■■□□ 2.17
PACRGL-227ENST00000513459 MAP2P11137 1827 aaKnown RBP28.63■■■□□ 2.17
PACRGL-227ENST00000513459 HSP90AB2PQ58FF8 381 aa28.62■■■□□ 2.17
PACRGL-227ENST00000513459 COL14A1Q05707 1796 aaKnown RBP28.62■■■□□ 2.17
PACRGL-227ENST00000513459 BLMP54132 1417 aaPredicted RBP28.62■■■□□ 2.17
PACRGL-227ENST00000513459 ABCC6O95255 1503 aa28.62■■■□□ 2.17
PACRGL-227ENST00000513459 EVA1CP58658 441 aa28.61■■■□□ 2.17
PACRGL-227ENST00000513459 INSRP06213 1382 aa28.6■■■□□ 2.17
PACRGL-227ENST00000513459 CDK12Q9NYV4 1490 aaPredicted RBP28.6■■■□□ 2.17
PACRGL-227ENST00000513459 FNBP4Q8N3X1 1017 aaPredicted RBP28.6■■■□□ 2.17
PACRGL-227ENST00000513459 CSB-PGBD3P0DP91 1061 aa28.57■■■□□ 2.16
PACRGL-227ENST00000513459 LTV1Q96GA3 475 aaPredicted RBP28.57■■■□□ 2.16
PACRGL-227ENST00000513459 STRN4Q9NRL3 753 aa28.57■■■□□ 2.16
PACRGL-227ENST00000513459 CAMTA1Q9Y6Y1 1673 aa28.57■■■□□ 2.16
PACRGL-227ENST00000513459 SLIT2O94813 1529 aa28.57■■■□□ 2.16
PACRGL-227ENST00000513459 ANKRD24Q8TF21 1146 aa28.57■■■□□ 2.16
PACRGL-227ENST00000513459 PEAK1Q9H792 1746 aa28.56■■■□□ 2.16
PACRGL-227ENST00000513459 AFF2P51816 1311 aa28.56■■■□□ 2.16
PACRGL-227ENST00000513459 USP21Q9UK80 565 aa28.56■■■□□ 2.16
PACRGL-227ENST00000513459 ERBB3P21860 1342 aa28.55■■■□□ 2.16
PACRGL-227ENST00000513459 UNC5CLQ8IV45 518 aa28.55■■■□□ 2.16
PACRGL-227ENST00000513459 LMO7Q8WWI1 1683 aa28.55■■■□□ 2.16
PACRGL-227ENST00000513459 COL18A1P39060 1754 aa28.55■■■□□ 2.16
PACRGL-227ENST00000513459 DIAPH1O60610 1272 aaKnown RBP28.53■■■□□ 2.16
PACRGL-227ENST00000513459 COL5A2P05997 1499 aaPredicted RBP28.53■■■□□ 2.16
PACRGL-227ENST00000513459 PLCH1Q4KWH8 1693 aa28.52■■■□□ 2.16
PACRGL-227ENST00000513459 EIF4A2Q14240 407 aaKnown RBP28.52■■■□□ 2.16
PACRGL-227ENST00000513459 WDR17Q8IZU2 1322 aa28.51■■■□□ 2.15
PACRGL-227ENST00000513459 TOM1L2Q6ZVM7 507 aa28.5■■■□□ 2.15
PACRGL-227ENST00000513459 PHF23Q9BUL5 403 aaPredicted RBP28.5■■■□□ 2.15
PACRGL-227ENST00000513459 BCL9LQ86UU0 1499 aa28.5■■■□□ 2.15
PACRGL-227ENST00000513459 ZNF772Q68DY9 489 aaPredicted RBP28.5■■■□□ 2.15
PACRGL-227ENST00000513459 MIER1Q8N108 512 aa28.5■■■□□ 2.15
PACRGL-227ENST00000513459 NLRP2Q9NX02 1062 aa28.5■■■□□ 2.15
PACRGL-227ENST00000513459 NUDCQ9Y266 331 aa28.5■■■□□ 2.15
PACRGL-227ENST00000513459 NWD2Q9ULI1 1742 aa28.49■■■□□ 2.15
PACRGL-227ENST00000513459 LARP1Q6PKG0 1096 aaKnown RBP28.49■■■□□ 2.15
PACRGL-227ENST00000513459 CCDC9Q9Y3X0 531 aaKnown RBP28.48■■■□□ 2.15
PACRGL-227ENST00000513459 IL13P35225 146 aa28.47■■■□□ 2.15
PACRGL-227ENST00000513459 MRS2Q9HD23 443 aa28.47■■■□□ 2.15
PACRGL-227ENST00000513459 RGPD5Q99666 1765 aa28.46■■■□□ 2.15
PACRGL-227ENST00000513459 VPS72Q15906 364 aa28.45■■■□□ 2.15
PACRGL-227ENST00000513459 TRPC5Q9UL62 973 aaPredicted RBP28.45■■■□□ 2.15
PACRGL-227ENST00000513459 CRB1P82279 1406 aa28.45■■■□□ 2.14
PACRGL-227ENST00000513459 U2SURPO15042 1029 aaKnown RBP28.45■■■□□ 2.14
PACRGL-227ENST00000513459 COL3A1P02461 1466 aaPredicted RBP28.44■■■□□ 2.14
PACRGL-227ENST00000513459 NBPF6Q5VWK0 638 aa28.43■■■□□ 2.14
PACRGL-227ENST00000513459 NBPF4Q96M43 638 aa28.43■■■□□ 2.14
PACRGL-227ENST00000513459 EYA1Q99502 592 aa28.43■■■□□ 2.14
PACRGL-227ENST00000513459 CARD10Q9BWT7 1032 aa28.43■■■□□ 2.14
PACRGL-227ENST00000513459 CCER2I3L3R5 266 aa28.42■■■□□ 2.14
PACRGL-227ENST00000513459 QTRT2Q9H974 415 aaKnown RBP28.42■■■□□ 2.14
PACRGL-227ENST00000513459 USP35Q9P2H5 1018 aa28.42■■■□□ 2.14
PACRGL-227ENST00000513459 CCDC184Q52MB2 194 aa28.42■■■□□ 2.14
PACRGL-227ENST00000513459 NRAPQ86VF7 1730 aa28.42■■■□□ 2.14
PACRGL-227ENST00000513459 SPATA31A5Q5VU36 1347 aa28.39■■■□□ 2.14
PACRGL-227ENST00000513459 SPATA31A7Q8IWB4 1347 aa28.39■■■□□ 2.14
PACRGL-227ENST00000513459 U2AF1L5P0DN76 240 aaPredicted RBP28.39■■■□□ 2.13
PACRGL-227ENST00000513459 U2AF1Q01081 240 aaKnown RBP eCLIP28.39■■■□□ 2.13
PACRGL-227ENST00000513459 WDR43Q15061 677 aaKnown RBP eCLIP28.39■■■□□ 2.13
PACRGL-227ENST00000513459 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.38■■■□□ 2.13
PACRGL-227ENST00000513459 SPATA31A1Q5TZJ5 1347 aa28.38■■■□□ 2.13
PACRGL-227ENST00000513459 IGSF1Q8N6C5 1336 aa28.38■■■□□ 2.13
PACRGL-227ENST00000513459 ATRNO75882 1429 aa28.38■■■□□ 2.13
PACRGL-227ENST00000513459 TCP11L2Q8N4U5 519 aa28.37■■■□□ 2.13
PACRGL-227ENST00000513459 USHBP1Q8N6Y0 703 aa28.37■■■□□ 2.13
PACRGL-227ENST00000513459 GJD4Q96KN9 370 aaPredicted RBP28.37■■■□□ 2.13
PACRGL-227ENST00000513459 FAM208AQ9UK61 1670 aaKnown RBP28.37■■■□□ 2.13
PACRGL-227ENST00000513459 THRAP3Q9Y2W1 955 aaKnown RBP28.37■■■□□ 2.13
PACRGL-227ENST00000513459 SULT6B1Q6IMI4 303 aa28.36■■■□□ 2.13
PACRGL-227ENST00000513459 RGS17Q9UGC6 210 aaPredicted RBP28.34■■■□□ 2.13
PACRGL-227ENST00000513459 HMOX1P09601 288 aa28.33■■■□□ 2.13
PACRGL-227ENST00000513459 RAPGEF4Q8WZA2 1011 aa28.32■■■□□ 2.12
PACRGL-227ENST00000513459 PNISRQ8TF01 805 aaKnown RBP28.32■■■□□ 2.12
PACRGL-227ENST00000513459 RBM6P78332 1123 aaKnown RBP28.3■■■□□ 2.12
PACRGL-227ENST00000513459 BARGINQ6ZT62 677 aa28.3■■■□□ 2.12
PACRGL-227ENST00000513459 AEBP1Q8IUX7 1158 aa28.3■■■□□ 2.12
PACRGL-227ENST00000513459 FCHSD2O94868 740 aa28.29■■■□□ 2.12
PACRGL-227ENST00000513459 IL2RBP14784 551 aa28.29■■■□□ 2.12
PACRGL-227ENST00000513459 KDRP35968 1356 aa28.29■■■□□ 2.12
PACRGL-227ENST00000513459 FAM98CQ17RN3 349 aaKnown RBP28.29■■■□□ 2.12
PACRGL-227ENST00000513459 CDCA7Q9BWT1 371 aaPredicted RBP28.29■■■□□ 2.12
PACRGL-227ENST00000513459 PNNQ9H307 717 aaKnown RBP28.29■■■□□ 2.12
PACRGL-227ENST00000513459 NCAPD2Q15021 1401 aa28.29■■■□□ 2.12
PACRGL-227ENST00000513459 RXRBP28702 533 aa28.28■■■□□ 2.12
PACRGL-227ENST00000513459 RGPD1P0DJD0 1748 aa28.28■■■□□ 2.12
PACRGL-227ENST00000513459 TATP17735 454 aaPredicted RBP28.27■■■□□ 2.12
PACRGL-227ENST00000513459 ADAMTS8Q9UP79 889 aa28.27■■■□□ 2.12
PACRGL-227ENST00000513459 RGPD2P0DJD1 1756 aa28.27■■■□□ 2.12
PACRGL-227ENST00000513459 A0A0G2JS52 829 aa28.26■■■□□ 2.11
PACRGL-227ENST00000513459 MYT1Q01538 1121 aa28.26■■■□□ 2.11
PACRGL-227ENST00000513459 POTEAQ6S8J7 498 aa28.26■■■□□ 2.11
PACRGL-227ENST00000513459 NEFMP07197 916 aa28.25■■■□□ 2.11
PACRGL-227ENST00000513459 FAM9BQ8IZU0 186 aa28.25■■■□□ 2.11
PACRGL-227ENST00000513459 RSPH6AQ9H0K4 717 aa28.24■■■□□ 2.11
PACRGL-227ENST00000513459 PRKAR2BP31323 418 aa28.24■■■□□ 2.11
PACRGL-227ENST00000513459 GLI3P10071 1580 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms