RNA–Protein interactions for RNA: ENST00000513321.1

NEIL3-202, Transcript of nei like DNA glycosylase 3, humanhuman

TSL 1 (best)

Gene NEIL3, Length 1,528 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL3-202ENST00000513321 IP6K1Q92551 441 aa28.6■■■□□ 2.17
NEIL3-202ENST00000513321 STRN4Q9NRL3 753 aa28.6■■■□□ 2.17
NEIL3-202ENST00000513321 POLKQ9UBT6 870 aa28.59■■■□□ 2.17
NEIL3-202ENST00000513321 TRPC5Q9UL62 973 aaPredicted RBP28.59■■■□□ 2.17
NEIL3-202ENST00000513321 EMILIN1Q9Y6C2 1016 aa28.59■■■□□ 2.17
NEIL3-202ENST00000513321 LMO7Q8WWI1 1683 aa28.58■■■□□ 2.17
NEIL3-202ENST00000513321 NWD2Q9ULI1 1742 aa28.58■■■□□ 2.17
NEIL3-202ENST00000513321 COL18A1P39060 1754 aa28.58■■■□□ 2.17
NEIL3-202ENST00000513321 PPM1GO15355 546 aaPredicted RBP28.57■■■□□ 2.16
NEIL3-202ENST00000513321 LTN1O94822 1766 aa28.57■■■□□ 2.16
NEIL3-202ENST00000513321 HOXC9P31274 260 aa28.57■■■□□ 2.16
NEIL3-202ENST00000513321 VPS72Q15906 364 aa28.56■■■□□ 2.16
NEIL3-202ENST00000513321 CCDC9Q9Y3X0 531 aaKnown RBP28.55■■■□□ 2.16
NEIL3-202ENST00000513321 ATRNO75882 1429 aa28.55■■■□□ 2.16
NEIL3-202ENST00000513321 COL5A2P05997 1499 aaPredicted RBP28.54■■■□□ 2.16
NEIL3-202ENST00000513321 LARP1Q6PKG0 1096 aaKnown RBP28.53■■■□□ 2.16
NEIL3-202ENST00000513321 ABCC6O95255 1503 aa28.53■■■□□ 2.16
NEIL3-202ENST00000513321 KIF24Q5T7B8 1368 aa28.53■■■□□ 2.16
NEIL3-202ENST00000513321 RTL1A6NKG5 1358 aa28.52■■■□□ 2.16
NEIL3-202ENST00000513321 NRAPQ86VF7 1730 aa28.52■■■□□ 2.16
NEIL3-202ENST00000513321 HSP90AB2PQ58FF8 381 aa28.52■■■□□ 2.16
NEIL3-202ENST00000513321 GJD4Q96KN9 370 aaPredicted RBP28.52■■■□□ 2.16
NEIL3-202ENST00000513321 FLT4P35916 1363 aa28.51■■■□□ 2.16
NEIL3-202ENST00000513321 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.51■■■□□ 2.15
NEIL3-202ENST00000513321 CSB-PGBD3P0DP91 1061 aa28.51■■■□□ 2.15
NEIL3-202ENST00000513321 ANKRD24Q8TF21 1146 aa28.51■■■□□ 2.15
NEIL3-202ENST00000513321 LTV1Q96GA3 475 aaPredicted RBP28.51■■■□□ 2.15
NEIL3-202ENST00000513321 BLMP54132 1417 aaPredicted RBP28.51■■■□□ 2.15
NEIL3-202ENST00000513321 RXRBP28702 533 aa28.5■■■□□ 2.15
NEIL3-202ENST00000513321 MAP2P11137 1827 aaKnown RBP28.5■■■□□ 2.15
NEIL3-202ENST00000513321 WDR17Q8IZU2 1322 aa28.5■■■□□ 2.15
NEIL3-202ENST00000513321 RBM6P78332 1123 aaKnown RBP28.49■■■□□ 2.15
NEIL3-202ENST00000513321 ERBB3P21860 1342 aa28.49■■■□□ 2.15
NEIL3-202ENST00000513321 SPATA31A5Q5VU36 1347 aa28.49■■■□□ 2.15
NEIL3-202ENST00000513321 SPATA31A7Q8IWB4 1347 aa28.49■■■□□ 2.15
NEIL3-202ENST00000513321 TOM1L2Q6ZVM7 507 aa28.48■■■□□ 2.15
NEIL3-202ENST00000513321 RGPD5Q99666 1765 aa28.48■■■□□ 2.15
NEIL3-202ENST00000513321 MTHFSP49914 203 aa28.48■■■□□ 2.15
NEIL3-202ENST00000513321 PEAK1Q9H792 1746 aa28.48■■■□□ 2.15
NEIL3-202ENST00000513321 INSRP06213 1382 aa28.48■■■□□ 2.15
NEIL3-202ENST00000513321 USP35Q9P2H5 1018 aa28.46■■■□□ 2.15
NEIL3-202ENST00000513321 SPATA31A1Q5TZJ5 1347 aa28.46■■■□□ 2.15
NEIL3-202ENST00000513321 PARD3Q8TEW0 1356 aa28.44■■■□□ 2.14
NEIL3-202ENST00000513321 NLRP2Q9NX02 1062 aa28.44■■■□□ 2.14
NEIL3-202ENST00000513321 CRB1P82279 1406 aa28.44■■■□□ 2.14
NEIL3-202ENST00000513321 SMG6Q86US8 1419 aaKnown RBP28.44■■■□□ 2.14
NEIL3-202ENST00000513321 PPP2R1AP30153 589 aa28.43■■■□□ 2.14
NEIL3-202ENST00000513321 RALBP1Q15311 655 aa28.43■■■□□ 2.14
NEIL3-202ENST00000513321 CARD10Q9BWT7 1032 aa28.42■■■□□ 2.14
NEIL3-202ENST00000513321 TCP11L2Q8N4U5 519 aa28.4■■■□□ 2.14
NEIL3-202ENST00000513321 FAM98CQ17RN3 349 aaKnown RBP28.39■■■□□ 2.14
NEIL3-202ENST00000513321 GLI3P10071 1580 aa28.39■■■□□ 2.14
NEIL3-202ENST00000513321 CDK12Q9NYV4 1490 aaPredicted RBP28.38■■■□□ 2.13
NEIL3-202ENST00000513321 EIF4A2Q14240 407 aaKnown RBP28.38■■■□□ 2.13
NEIL3-202ENST00000513321 THRAP3Q9Y2W1 955 aaKnown RBP28.38■■■□□ 2.13
NEIL3-202ENST00000513321 ONECUT3O60422 494 aaPredicted RBP28.37■■■□□ 2.13
NEIL3-202ENST00000513321 NBPF6Q5VWK0 638 aa28.37■■■□□ 2.13
NEIL3-202ENST00000513321 NBPF4Q96M43 638 aa28.37■■■□□ 2.13
NEIL3-202ENST00000513321 PRKRIP1Q9H875 184 aaPredicted RBP28.37■■■□□ 2.13
NEIL3-202ENST00000513321 BARGINQ6ZT62 677 aa28.35■■■□□ 2.13
NEIL3-202ENST00000513321 SEPT12Q8IYM1 358 aa28.33■■■□□ 2.13
NEIL3-202ENST00000513321 A0A0G2JS52 829 aa28.32■■■□□ 2.12
NEIL3-202ENST00000513321 MYT1Q01538 1121 aa28.32■■■□□ 2.12
NEIL3-202ENST00000513321 USHBP1Q8N6Y0 703 aa28.32■■■□□ 2.12
NEIL3-202ENST00000513321 EYA1Q99502 592 aa28.32■■■□□ 2.12
NEIL3-202ENST00000513321 IL13P35225 146 aa28.31■■■□□ 2.12
NEIL3-202ENST00000513321 CFAP53Q96M91 514 aa28.31■■■□□ 2.12
NEIL3-202ENST00000513321 DIAPH1O60610 1272 aaKnown RBP28.3■■■□□ 2.12
NEIL3-202ENST00000513321 ILDR2Q71H61 639 aa28.3■■■□□ 2.12
NEIL3-202ENST00000513321 MYBBP1AQ9BQG0 1328 aaKnown RBP28.29■■■□□ 2.12
NEIL3-202ENST00000513321 RGS12O14924 1447 aa28.28■■■□□ 2.12
NEIL3-202ENST00000513321 FAM208AQ9UK61 1670 aaKnown RBP28.28■■■□□ 2.12
NEIL3-202ENST00000513321 ANP32CO43423 234 aa28.28■■■□□ 2.12
NEIL3-202ENST00000513321 CDCA7Q9BWT1 371 aaPredicted RBP28.27■■■□□ 2.12
NEIL3-202ENST00000513321 RGPD2P0DJD1 1756 aa28.26■■■□□ 2.11
NEIL3-202ENST00000513321 IL2RBP14784 551 aa28.26■■■□□ 2.11
NEIL3-202ENST00000513321 IGSF1Q8N6C5 1336 aa28.24■■■□□ 2.11
NEIL3-202ENST00000513321 COL3A1P02461 1466 aaPredicted RBP28.24■■■□□ 2.11
NEIL3-202ENST00000513321 DISP2A7MBM2 1401 aa28.23■■■□□ 2.11
NEIL3-202ENST00000513321 RAPGEF4Q8WZA2 1011 aa28.22■■■□□ 2.11
NEIL3-202ENST00000513321 THSD7AQ9UPZ6 1657 aa28.21■■■□□ 2.11
NEIL3-202ENST00000513321 NCAPD2Q15021 1401 aa28.2■■■□□ 2.11
NEIL3-202ENST00000513321 U2SURPO15042 1029 aaKnown RBP28.2■■■□□ 2.1
NEIL3-202ENST00000513321 DDB1Q16531 1140 aa28.2■■■□□ 2.1
NEIL3-202ENST00000513321 EXOC5O00471 708 aa28.19■■■□□ 2.1
NEIL3-202ENST00000513321 SULT6B1Q6IMI4 303 aa28.19■■■□□ 2.1
NEIL3-202ENST00000513321 NUDCQ9Y266 331 aa28.19■■■□□ 2.1
NEIL3-202ENST00000513321 KRT27Q7Z3Y8 459 aa28.18■■■□□ 2.1
NEIL3-202ENST00000513321 TATP17735 454 aaPredicted RBP28.18■■■□□ 2.1
NEIL3-202ENST00000513321 PDE3BQ13370 1112 aa28.18■■■□□ 2.1
NEIL3-202ENST00000513321 AEBP1Q8IUX7 1158 aa28.18■■■□□ 2.1
NEIL3-202ENST00000513321 MEGF6O75095 1541 aa28.16■■■□□ 2.1
NEIL3-202ENST00000513321 HMOX1P09601 288 aa28.15■■■□□ 2.1
NEIL3-202ENST00000513321 RGPD1P0DJD0 1748 aa28.14■■■□□ 2.09
NEIL3-202ENST00000513321 ZCRB1Q8TBF4 217 aaKnown RBP28.13■■■□□ 2.09
NEIL3-202ENST00000513321 WNK3Q9BYP7 1800 aa28.13■■■□□ 2.09
NEIL3-202ENST00000513321 PARP4Q9UKK3 1724 aaKnown RBP28.13■■■□□ 2.09
NEIL3-202ENST00000513321 DIEXFQ68CQ4 756 aaKnown RBP28.13■■■□□ 2.09
NEIL3-202ENST00000513321 OVOS2A0A0G2JMS6 1433 aa28.12■■■□□ 2.09
NEIL3-202ENST00000513321 KDRP35968 1356 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms