RNA–Protein interactions for RNA: ENST00000512985.1

CDK7-209, Transcript of cyclin dependent kinase 7, humanhuman

TSL 2

Gene CDK7, Length 261 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-209ENST00000512985 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
CDK7-209ENST00000512985 BLMP54132 1417 aaPredicted RBP17.42■□□□□ 0.38
CDK7-209ENST00000512985 CSB-PGBD3P0DP91 1061 aa17.42■□□□□ 0.38
CDK7-209ENST00000512985 COL5A2P05997 1499 aaPredicted RBP17.42■□□□□ 0.38
CDK7-209ENST00000512985 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
CDK7-209ENST00000512985 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
CDK7-209ENST00000512985 THRAP3Q9Y2W1 955 aaKnown RBP17.41■□□□□ 0.38
CDK7-209ENST00000512985 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
CDK7-209ENST00000512985 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
CDK7-209ENST00000512985 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
CDK7-209ENST00000512985 LTN1O94822 1766 aa17.4■□□□□ 0.38
CDK7-209ENST00000512985 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
CDK7-209ENST00000512985 IP6K1Q92551 441 aa17.4■□□□□ 0.38
CDK7-209ENST00000512985 WDR17Q8IZU2 1322 aa17.4■□□□□ 0.38
CDK7-209ENST00000512985 CRB1P82279 1406 aa17.39■□□□□ 0.38
CDK7-209ENST00000512985 A0A0G2JS52 829 aa17.39■□□□□ 0.37
CDK7-209ENST00000512985 MYT1Q01538 1121 aa17.39■□□□□ 0.37
CDK7-209ENST00000512985 ILDR2Q71H61 639 aa17.39■□□□□ 0.37
CDK7-209ENST00000512985 MAP3K19Q56UN5 1328 aa17.39■□□□□ 0.37
CDK7-209ENST00000512985 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
CDK7-209ENST00000512985 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
CDK7-209ENST00000512985 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
CDK7-209ENST00000512985 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
CDK7-209ENST00000512985 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
CDK7-209ENST00000512985 FLT4P35916 1363 aa17.38■□□□□ 0.37
CDK7-209ENST00000512985 NPC1L1Q9UHC9 1359 aa17.38■□□□□ 0.37
CDK7-209ENST00000512985 COL18A1P39060 1754 aa17.38■□□□□ 0.37
CDK7-209ENST00000512985 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
CDK7-209ENST00000512985 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
CDK7-209ENST00000512985 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
CDK7-209ENST00000512985 ERBB3P21860 1342 aa17.37■□□□□ 0.37
CDK7-209ENST00000512985 GLI3P10071 1580 aa17.36■□□□□ 0.37
CDK7-209ENST00000512985 HOXC9P31274 260 aa17.36■□□□□ 0.37
CDK7-209ENST00000512985 BARGINQ6ZT62 677 aa17.36■□□□□ 0.37
CDK7-209ENST00000512985 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
CDK7-209ENST00000512985 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
CDK7-209ENST00000512985 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
CDK7-209ENST00000512985 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
CDK7-209ENST00000512985 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
CDK7-209ENST00000512985 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
CDK7-209ENST00000512985 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
CDK7-209ENST00000512985 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
CDK7-209ENST00000512985 RGS12O14924 1447 aa17.35■□□□□ 0.37
CDK7-209ENST00000512985 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.37
CDK7-209ENST00000512985 INSRP06213 1382 aa17.33■□□□□ 0.36
CDK7-209ENST00000512985 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
CDK7-209ENST00000512985 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
CDK7-209ENST00000512985 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.36
CDK7-209ENST00000512985 FBLN1P23142 703 aa17.32■□□□□ 0.36
CDK7-209ENST00000512985 RGPD5Q99666 1765 aa17.32■□□□□ 0.36
CDK7-209ENST00000512985 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
CDK7-209ENST00000512985 POLKQ9UBT6 870 aa17.31■□□□□ 0.36
CDK7-209ENST00000512985 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
CDK7-209ENST00000512985 MAP2P11137 1827 aaKnown RBP17.29■□□□□ 0.36
CDK7-209ENST00000512985 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
CDK7-209ENST00000512985 SOCS7O14512 581 aa17.29■□□□□ 0.36
CDK7-209ENST00000512985 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
CDK7-209ENST00000512985 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
CDK7-209ENST00000512985 HSP90AB2PQ58FF8 381 aa17.28■□□□□ 0.36
CDK7-209ENST00000512985 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
CDK7-209ENST00000512985 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
CDK7-209ENST00000512985 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
CDK7-209ENST00000512985 DDB1Q16531 1140 aa17.26■□□□□ 0.35
CDK7-209ENST00000512985 IL2RBP14784 551 aa17.25■□□□□ 0.35
CDK7-209ENST00000512985 PEAK1Q9H792 1746 aa17.24■□□□□ 0.35
CDK7-209ENST00000512985 EXOC5O00471 708 aa17.24■□□□□ 0.35
CDK7-209ENST00000512985 MTHFSP49914 203 aa17.23■□□□□ 0.35
CDK7-209ENST00000512985 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
CDK7-209ENST00000512985 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
CDK7-209ENST00000512985 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
CDK7-209ENST00000512985 CCDC125Q86Z20 511 aa17.22■□□□□ 0.35
CDK7-209ENST00000512985 WNK3Q9BYP7 1800 aa17.21■□□□□ 0.35
CDK7-209ENST00000512985 RALBP1Q15311 655 aa17.21■□□□□ 0.35
CDK7-209ENST00000512985 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
CDK7-209ENST00000512985 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
CDK7-209ENST00000512985 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
CDK7-209ENST00000512985 DISP2A7MBM2 1401 aa17.21■□□□□ 0.34
CDK7-209ENST00000512985 BRWD3Q6RI45 1802 aa17.2■□□□□ 0.34
CDK7-209ENST00000512985 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
CDK7-209ENST00000512985 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
CDK7-209ENST00000512985 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
CDK7-209ENST00000512985 DIAPH1O60610 1272 aaKnown RBP17.18■□□□□ 0.34
CDK7-209ENST00000512985 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
CDK7-209ENST00000512985 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
CDK7-209ENST00000512985 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
CDK7-209ENST00000512985 OVOS2A0A0G2JMS6 1433 aa17.17■□□□□ 0.34
CDK7-209ENST00000512985 EYA1Q99502 592 aa17.17■□□□□ 0.34
CDK7-209ENST00000512985 PARD3Q8TEW0 1356 aa17.16■□□□□ 0.34
CDK7-209ENST00000512985 PPP2R1AP30153 589 aa17.16■□□□□ 0.34
CDK7-209ENST00000512985 NUDCQ9Y266 331 aa17.16■□□□□ 0.34
CDK7-209ENST00000512985 USHBP1Q8N6Y0 703 aa17.15■□□□□ 0.34
CDK7-209ENST00000512985 ZCRB1Q8TBF4 217 aaKnown RBP17.15■□□□□ 0.34
CDK7-209ENST00000512985 UPF1Q92900 1129 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDK7-209ENST00000512985 IGSF1Q8N6C5 1336 aa17.15■□□□□ 0.34
CDK7-209ENST00000512985 NCAPD2Q15021 1401 aa17.14■□□□□ 0.33
CDK7-209ENST00000512985 IL13P35225 146 aa17.14■□□□□ 0.33
CDK7-209ENST00000512985 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
CDK7-209ENST00000512985 RGPD2P0DJD1 1756 aa17.14■□□□□ 0.33
CDK7-209ENST00000512985 PCDH11XQ9BZA7 1347 aa17.13■□□□□ 0.33
CDK7-209ENST00000512985 PCDH11YQ9BZA8 1340 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms