RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 FAM181BA6NEQ2 426 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 MAN1A2O60476 641 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 NEUROD2Q15784 382 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 ERFEQ4G0M1 354 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 LINC00528Q8N1L1 170 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 SLC10A4Q96EP9 437 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 TSEN34Q9BSV6 310 aaKnown RBP7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 FAM117AQ9C073 453 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 GPSM3Q9Y4H4 160 aa7.68□□□□□ -1.18
TOPBP1-208ENST00000511439 RB1CC1Q8TDY2 1594 aa7.67□□□□□ -1.18
TOPBP1-208ENST00000511439 BMP2P12643 396 aa7.67□□□□□ -1.18
TOPBP1-208ENST00000511439 PTK2Q05397 1052 aa7.67□□□□□ -1.18
TOPBP1-208ENST00000511439 LCE2CQ5TA81 110 aa7.67□□□□□ -1.18
TOPBP1-208ENST00000511439 ZBTB33Q86T24 672 aa7.67□□□□□ -1.18
TOPBP1-208ENST00000511439 PGPEP1Q9NXJ5 209 aa7.67□□□□□ -1.18
TOPBP1-208ENST00000511439 DHX9Q08211 1270 aaKnown RBP7.66□□□□□ -1.18
TOPBP1-208ENST00000511439 C6orf118Q5T5N4 469 aa7.66□□□□□ -1.18
TOPBP1-208ENST00000511439 PROCA1Q8NCQ7 364 aaPredicted RBP7.66□□□□□ -1.18
TOPBP1-208ENST00000511439 LRRN4Q8WUT4 740 aa7.66□□□□□ -1.18
TOPBP1-208ENST00000511439 AP1G2O75843 785 aa7.65□□□□□ -1.18
TOPBP1-208ENST00000511439 NR6A1Q15406 480 aa7.65□□□□□ -1.18
TOPBP1-208ENST00000511439 GMPRP36959 345 aa7.64□□□□□ -1.19
TOPBP1-208ENST00000511439 KCTD15Q96SI1 283 aaPredicted RBP7.64□□□□□ -1.19
TOPBP1-208ENST00000511439 GOPCQ9HD26 462 aa7.64□□□□□ -1.19
TOPBP1-208ENST00000511439 CECR2Q9BXF3 1484 aa7.63□□□□□ -1.19
TOPBP1-208ENST00000511439 VEGFBP49765 207 aa7.63□□□□□ -1.19
TOPBP1-208ENST00000511439 NBPF20Q3BBV1 942 aa7.63□□□□□ -1.19
TOPBP1-208ENST00000511439 PPP1R26Q5T8A7 1209 aaPredicted RBP7.63□□□□□ -1.19
TOPBP1-208ENST00000511439 TRIM52Q96A61 297 aa7.63□□□□□ -1.19
TOPBP1-208ENST00000511439 SOS2Q07890 1332 aaPredicted RBP7.62□□□□□ -1.19
TOPBP1-208ENST00000511439 VSIG8P0DPA2 414 aa7.62□□□□□ -1.19
TOPBP1-208ENST00000511439 SOBPA7XYQ1 873 aa7.61□□□□□ -1.19
TOPBP1-208ENST00000511439 USP17L8P0C7I0 530 aa7.61□□□□□ -1.19
TOPBP1-208ENST00000511439 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.61□□□□□ -1.19
TOPBP1-208ENST00000511439 Q6ZVU0 165 aa7.61□□□□□ -1.19
TOPBP1-208ENST00000511439 ZSCAN1Q8NBB4 408 aa7.61□□□□□ -1.19
TOPBP1-208ENST00000511439 PCMTD1Q96MG8 357 aaPredicted RBP7.61□□□□□ -1.19
TOPBP1-208ENST00000511439 ERBB4Q15303 1308 aa7.6□□□□□ -1.19
TOPBP1-208ENST00000511439 TTLL8A6PVC2 850 aa7.59□□□□□ -1.19
TOPBP1-208ENST00000511439 RFC5P40937 340 aa7.59□□□□□ -1.19
TOPBP1-208ENST00000511439 TMEM259Q4ZIN3 620 aa7.59□□□□□ -1.19
TOPBP1-208ENST00000511439 FBXO31Q5XUX0 539 aaPredicted RBP7.59□□□□□ -1.19
TOPBP1-208ENST00000511439 ADAM32Q8TC27 787 aa7.59□□□□□ -1.19
TOPBP1-208ENST00000511439 SPINT1O43278 529 aa7.58□□□□□ -1.2
TOPBP1-208ENST00000511439 PPFIA3O75145 1194 aa7.58□□□□□ -1.2
TOPBP1-208ENST00000511439 INTS6LQ5JSJ4 861 aaKnown RBP7.58□□□□□ -1.2
TOPBP1-208ENST00000511439 DNMT3LQ9UJW3 386 aa7.58□□□□□ -1.2
TOPBP1-208ENST00000511439 TMEM132AQ24JP5 1023 aa7.57□□□□□ -1.2
TOPBP1-208ENST00000511439 DZIP3Q86Y13 1208 aaKnown RBP7.57□□□□□ -1.2
TOPBP1-208ENST00000511439 CUX2O14529 1486 aa7.56□□□□□ -1.2
TOPBP1-208ENST00000511439 CBLBQ13191 982 aa7.56□□□□□ -1.2
TOPBP1-208ENST00000511439 OCSTAMPQ9BR26 566 aa7.56□□□□□ -1.2
TOPBP1-208ENST00000511439 HMX1Q9NP08 348 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-208ENST00000511439 SEPT12Q8IYM1 358 aa7.55□□□□□ -1.2
TOPBP1-208ENST00000511439 EPS8L1Q8TE68 723 aa7.55□□□□□ -1.2
TOPBP1-208ENST00000511439 CCDC125Q86Z20 511 aa7.54□□□□□ -1.2
TOPBP1-208ENST00000511439 IL27Q8NEV9 243 aa7.54□□□□□ -1.2
TOPBP1-208ENST00000511439 ZNF592Q92610 1267 aa7.54□□□□□ -1.2
TOPBP1-208ENST00000511439 PTSQ03393 145 aa7.53□□□□□ -1.2
TOPBP1-208ENST00000511439 FIGNL2A6NMB9 653 aa7.52□□□□□ -1.21
TOPBP1-208ENST00000511439 ESPNB1AK53 854 aa7.52□□□□□ -1.21
TOPBP1-208ENST00000511439 LORP23490 312 aaPredicted RBP7.52□□□□□ -1.21
TOPBP1-208ENST00000511439 CC2D2AQ9P2K1 1620 aa7.52□□□□□ -1.21
TOPBP1-208ENST00000511439 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
TOPBP1-208ENST00000511439 ADH1AP07327 375 aa7.51□□□□□ -1.21
TOPBP1-208ENST00000511439 RELBQ01201 579 aa7.51□□□□□ -1.21
TOPBP1-208ENST00000511439 ZNF784Q8NCA9 323 aaPredicted RBP7.51□□□□□ -1.21
TOPBP1-208ENST00000511439 TRIM34Q9BYJ4 488 aa7.51□□□□□ -1.21
TOPBP1-208ENST00000511439 ERVH48-1M5A8F1 160 aa7.5□□□□□ -1.21
TOPBP1-208ENST00000511439 RAB15P59190 212 aa7.5□□□□□ -1.21
TOPBP1-208ENST00000511439 MCCD1P59942 119 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-208ENST00000511439 NANOS1Q8WY41 292 aaKnown RBP7.5□□□□□ -1.21
TOPBP1-208ENST00000511439 AGBL1Q96MI9 1066 aa7.5□□□□□ -1.21
TOPBP1-208ENST00000511439 POLMQ9NP87 494 aaPredicted RBP7.5□□□□□ -1.21
TOPBP1-208ENST00000511439 APBB1O00213 710 aa7.49□□□□□ -1.21
TOPBP1-208ENST00000511439 SOCS7O14512 581 aa7.49□□□□□ -1.21
TOPBP1-208ENST00000511439 CTSOP43234 321 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-208ENST00000511439 CCDC155Q8N6L0 562 aa7.49□□□□□ -1.21
TOPBP1-208ENST00000511439 INSM2Q96T92 566 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-208ENST00000511439 TMPRSS4Q9NRS4 437 aa7.49□□□□□ -1.21
TOPBP1-208ENST00000511439 ZNF330Q9Y3S2 320 aaPredicted RBP7.49□□□□□ -1.21
TOPBP1-208ENST00000511439 SLC35F4A4IF30 521 aa7.48□□□□□ -1.21
TOPBP1-208ENST00000511439 RNF20Q5VTR2 975 aa7.48□□□□□ -1.21
TOPBP1-208ENST00000511439 BANK1Q8NDB2 785 aa7.48□□□□□ -1.21
TOPBP1-208ENST00000511439 LILRA1O75019 489 aa7.47□□□□□ -1.21
TOPBP1-208ENST00000511439 PTGIRP43119 386 aa7.47□□□□□ -1.21
TOPBP1-208ENST00000511439 RNF217Q8TC41 542 aa7.47□□□□□ -1.21
TOPBP1-208ENST00000511439 ZNF395Q9H8N7 513 aaPredicted RBP7.47□□□□□ -1.21
TOPBP1-208ENST00000511439 PCDHB9Q9Y5E1 797 aa7.47□□□□□ -1.21
TOPBP1-208ENST00000511439 ITGA6P23229 1130 aa7.46□□□□□ -1.22
TOPBP1-208ENST00000511439 GJD4Q96KN9 370 aaPredicted RBP7.46□□□□□ -1.22
TOPBP1-208ENST00000511439 FBXO45P0C2W1 286 aa7.45□□□□□ -1.22
TOPBP1-208ENST00000511439 SV2AQ7L0J3 742 aa7.45□□□□□ -1.22
TOPBP1-208ENST00000511439 ADD1P35611 737 aaKnown RBP7.44□□□□□ -1.22
TOPBP1-208ENST00000511439 NR1H3Q13133 447 aa7.44□□□□□ -1.22
TOPBP1-208ENST00000511439 LYSMD3Q7Z3D4 306 aa7.44□□□□□ -1.22
TOPBP1-208ENST00000511439 CNTNAP3BQ96NU0 1288 aa7.44□□□□□ -1.22
TOPBP1-208ENST00000511439 CNTNAP3Q9BZ76 1288 aa7.44□□□□□ -1.22
TOPBP1-208ENST00000511439 CYLDQ9NQC7 956 aa7.44□□□□□ -1.22
TOPBP1-208ENST00000511439 NACADO15069 1562 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms