RNA–Protein interactions for RNA: ENST00000511255.1

SMAD1-210, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-210ENST00000511255 ADGRD1Q6QNK2 874 aa11.22□□□□□ -0.61
SMAD1-210ENST00000511255 BCL2L12Q9HB09 334 aa11.22□□□□□ -0.61
SMAD1-210ENST00000511255 SETBP1Q9Y6X0 1596 aa11.22□□□□□ -0.61
SMAD1-210ENST00000511255 SPATA31E1Q6ZUB1 1445 aa11.21□□□□□ -0.61
SMAD1-210ENST00000511255 MSH6P52701 1360 aa11.21□□□□□ -0.61
SMAD1-210ENST00000511255 ANKRD30BQ9BXX2 1392 aa11.21□□□□□ -0.61
SMAD1-210ENST00000511255 CHD2O14647 1828 aaKnown RBP11.21□□□□□ -0.62
SMAD1-210ENST00000511255 NRXN3Q9Y4C0 1643 aa11.2□□□□□ -0.62
SMAD1-210ENST00000511255 PTPRUQ92729 1446 aa11.2□□□□□ -0.62
SMAD1-210ENST00000511255 METP08581 1390 aa11.2□□□□□ -0.62
SMAD1-210ENST00000511255 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
SMAD1-210ENST00000511255 TRIM26Q12899 539 aaPredicted RBP11.2□□□□□ -0.62
SMAD1-210ENST00000511255 PPLO60437 1756 aa11.2□□□□□ -0.62
SMAD1-210ENST00000511255 PRIM1P49642 420 aaKnown RBP11.19□□□□□ -0.62
SMAD1-210ENST00000511255 DMRTA1Q5VZB9 504 aa11.19□□□□□ -0.62
SMAD1-210ENST00000511255 TYW1BQ6NUM6 668 aa11.19□□□□□ -0.62
SMAD1-210ENST00000511255 EPAS1Q99814 870 aa11.18□□□□□ -0.62
SMAD1-210ENST00000511255 XIRP1Q702N8 1843 aaKnown RBP11.18□□□□□ -0.62
SMAD1-210ENST00000511255 GRXCR2A6NFK2 248 aa11.17□□□□□ -0.62
SMAD1-210ENST00000511255 HSPA1LP34931 641 aa11.17□□□□□ -0.62
SMAD1-210ENST00000511255 KCNK17Q96T54 332 aa11.17□□□□□ -0.62
SMAD1-210ENST00000511255 ALKQ9UM73 1620 aa11.17□□□□□ -0.62
SMAD1-210ENST00000511255 HRO43593 1189 aa11.16□□□□□ -0.62
SMAD1-210ENST00000511255 OSBPP22059 807 aa11.16□□□□□ -0.62
SMAD1-210ENST00000511255 MLLT3P42568 568 aaPredicted RBP11.16□□□□□ -0.62
SMAD1-210ENST00000511255 FBXW7Q969H0 707 aa11.16□□□□□ -0.62
SMAD1-210ENST00000511255 ATF3P18847 181 aa11.15□□□□□ -0.62
SMAD1-210ENST00000511255 DCAF11Q8TEB1 546 aa11.15□□□□□ -0.62
SMAD1-210ENST00000511255 STK26Q9P289 416 aa11.15□□□□□ -0.62
SMAD1-210ENST00000511255 NCOA3Q9Y6Q9 1424 aa11.15□□□□□ -0.62
SMAD1-210ENST00000511255 XRN1Q8IZH2 1706 aaKnown RBP11.15□□□□□ -0.63
SMAD1-210ENST00000511255 SEMA3EO15041 775 aa11.14□□□□□ -0.63
SMAD1-210ENST00000511255 PTPREP23469 700 aa11.14□□□□□ -0.63
SMAD1-210ENST00000511255 NBR1Q14596 966 aa11.14□□□□□ -0.63
SMAD1-210ENST00000511255 TMEM132EQ6IEE7 984 aa11.14□□□□□ -0.63
SMAD1-210ENST00000511255 C19orf44Q9H6X5 657 aa11.14□□□□□ -0.63
SMAD1-210ENST00000511255 PIK3C2GO75747 1445 aa11.14□□□□□ -0.63
SMAD1-210ENST00000511255 IFT172Q9UG01 1749 aa11.14□□□□□ -0.63
SMAD1-210ENST00000511255 CFAP70Q5T0N1 1121 aa11.13□□□□□ -0.63
SMAD1-210ENST00000511255 C6orf132Q5T0Z8 1188 aa11.13□□□□□ -0.63
SMAD1-210ENST00000511255 SLAIN2Q9P270 581 aa11.13□□□□□ -0.63
SMAD1-210ENST00000511255 MYOM2P54296 1465 aa11.12□□□□□ -0.63
SMAD1-210ENST00000511255 SETD1AO15047 1707 aaKnown RBP11.12□□□□□ -0.63
SMAD1-210ENST00000511255 TK2O00142 265 aa11.12□□□□□ -0.63
SMAD1-210ENST00000511255 COL9A1P20849 921 aa11.12□□□□□ -0.63
SMAD1-210ENST00000511255 ROBO2Q9HCK4 1378 aa11.12□□□□□ -0.63
SMAD1-210ENST00000511255 PTCH1Q13635 1447 aa11.11□□□□□ -0.63
SMAD1-210ENST00000511255 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
SMAD1-210ENST00000511255 EN1Q05925 392 aaPredicted RBP11.11□□□□□ -0.63
SMAD1-210ENST00000511255 C14orf93Q9H972 538 aaKnown RBP11.11□□□□□ -0.63
SMAD1-210ENST00000511255 ADGRL3Q9HAR2 1447 aa11.1□□□□□ -0.63
SMAD1-210ENST00000511255 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.1□□□□□ -0.63
SMAD1-210ENST00000511255 NEUROD1Q13562 356 aa11.1□□□□□ -0.63
SMAD1-210ENST00000511255 TSR1Q2NL82 804 aaKnown RBP11.1□□□□□ -0.63
SMAD1-210ENST00000511255 LRPPRCP42704 1394 aaKnown RBP11.1□□□□□ -0.63
SMAD1-210ENST00000511255 ROBO1Q9Y6N7 1651 aa11.09□□□□□ -0.63
SMAD1-210ENST00000511255 NRXN1Q9ULB1 1477 aa11.09□□□□□ -0.63
SMAD1-210ENST00000511255 DHX57Q6P158 1386 aaKnown RBP11.09□□□□□ -0.63
SMAD1-210ENST00000511255 WAPLQ7Z5K2 1190 aa11.09□□□□□ -0.63
SMAD1-210ENST00000511255 STAC3Q96MF2 364 aa11.09□□□□□ -0.63
SMAD1-210ENST00000511255 SIN3AQ96ST3 1273 aa11.09□□□□□ -0.63
SMAD1-210ENST00000511255 ASXL1Q8IXJ9 1541 aa11.09□□□□□ -0.63
SMAD1-210ENST00000511255 DCCP43146 1447 aa11.09□□□□□ -0.63
SMAD1-210ENST00000511255 YTHDC2Q9H6S0 1430 aaKnown RBP11.09□□□□□ -0.63
SMAD1-210ENST00000511255 ZBED2Q9BTP6 218 aa11.08□□□□□ -0.64
SMAD1-210ENST00000511255 VPS9D1Q9Y2B5 631 aa11.08□□□□□ -0.64
SMAD1-210ENST00000511255 ABCC11Q96J66 1382 aa11.07□□□□□ -0.64
SMAD1-210ENST00000511255 DISP3Q9P2K9 1392 aa11.07□□□□□ -0.64
SMAD1-210ENST00000511255 LAMC1P11047 1609 aa11.07□□□□□ -0.64
SMAD1-210ENST00000511255 TESPA1A2RU30 521 aaPredicted RBP11.07□□□□□ -0.64
SMAD1-210ENST00000511255 SAFB2Q14151 953 aaKnown RBP eCLIP11.07□□□□□ -0.64
SMAD1-210ENST00000511255 KCTD12Q96CX2 325 aaKnown RBP11.07□□□□□ -0.64
SMAD1-210ENST00000511255 SLC4A5Q9BY07 1137 aa11.07□□□□□ -0.64
SMAD1-210ENST00000511255 NALCNQ8IZF0 1738 aa11.06□□□□□ -0.64
SMAD1-210ENST00000511255 PPP1R3GB7ZBB8 358 aa11.06□□□□□ -0.64
SMAD1-210ENST00000511255 MAP3K7O43318 606 aa11.06□□□□□ -0.64
SMAD1-210ENST00000511255 POGKQ9P215 609 aa11.06□□□□□ -0.64
SMAD1-210ENST00000511255 TECPR2O15040 1411 aa11.06□□□□□ -0.64
SMAD1-210ENST00000511255 PRAG1Q86YV5 1406 aa11.06□□□□□ -0.64
SMAD1-210ENST00000511255 PLEKHH1Q9ULM0 1364 aa11.05□□□□□ -0.64
SMAD1-210ENST00000511255 MST1RQ04912 1400 aa11.05□□□□□ -0.64
SMAD1-210ENST00000511255 BRINP3Q76B58 766 aa11.05□□□□□ -0.64
SMAD1-210ENST00000511255 PRAM1Q96QH2 718 aa11.05□□□□□ -0.64
SMAD1-210ENST00000511255 PCGF6Q9BYE7 350 aa11.05□□□□□ -0.64
SMAD1-210ENST00000511255 TRAK1Q9UPV9 953 aa11.05□□□□□ -0.64
SMAD1-210ENST00000511255 NUTM2FA1L443 756 aa11.04□□□□□ -0.64
SMAD1-210ENST00000511255 KNDC1Q76NI1 1749 aa11.04□□□□□ -0.64
SMAD1-210ENST00000511255 PROX2Q3B8N5 592 aa11.03□□□□□ -0.64
SMAD1-210ENST00000511255 L3MBTL2Q969R5 705 aa11.03□□□□□ -0.64
SMAD1-210ENST00000511255 PHLPP1O60346 1717 aa11.03□□□□□ -0.64
SMAD1-210ENST00000511255 C1orf167Q5SNV9 1468 aa11.02□□□□□ -0.65
SMAD1-210ENST00000511255 BHMG1C9JSJ3 638 aaPredicted RBP11.02□□□□□ -0.65
SMAD1-210ENST00000511255 SIRT1Q96EB6 747 aa11.02□□□□□ -0.65
SMAD1-210ENST00000511255 ORAI2Q96SN7 254 aa11.02□□□□□ -0.65
SMAD1-210ENST00000511255 CDHR5Q9HBB8 845 aa11.02□□□□□ -0.65
SMAD1-210ENST00000511255 NPDC1Q9NQX5 325 aaPredicted RBP11.02□□□□□ -0.65
SMAD1-210ENST00000511255 ADGRB1O14514 1584 aa11.02□□□□□ -0.65
SMAD1-210ENST00000511255 RGS20O76081 388 aa11.01□□□□□ -0.65
SMAD1-210ENST00000511255 ESCO1Q5FWF5 840 aa11.01□□□□□ -0.65
SMAD1-210ENST00000511255 DDX17Q92841 729 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms