RNA–Protein interactions for RNA: ENST00000510801.5

COPS4-208, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 381 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-208ENST00000510801 UPF1Q92900 1129 aaKnown RBP eCLIP17.24■□□□□ 0.35
COPS4-208ENST00000510801 WDR17Q8IZU2 1322 aa17.23■□□□□ 0.35
COPS4-208ENST00000510801 NSD3Q9BZ95 1437 aa17.23■□□□□ 0.35
COPS4-208ENST00000510801 TCP11L2Q8N4U5 519 aa17.23■□□□□ 0.35
COPS4-208ENST00000510801 STRN4Q9NRL3 753 aa17.23■□□□□ 0.35
COPS4-208ENST00000510801 THSD7AQ9UPZ6 1657 aa17.23■□□□□ 0.35
COPS4-208ENST00000510801 BLMP54132 1417 aaPredicted RBP17.22■□□□□ 0.35
COPS4-208ENST00000510801 FAM98CQ17RN3 349 aaKnown RBP17.22■□□□□ 0.35
COPS4-208ENST00000510801 KIF24Q5T7B8 1368 aa17.22■□□□□ 0.35
COPS4-208ENST00000510801 EP400Q96L91 3159 aa17.22■□□□□ 0.35
COPS4-208ENST00000510801 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
COPS4-208ENST00000510801 CCDC125Q86Z20 511 aa17.21■□□□□ 0.35
COPS4-208ENST00000510801 IP6K1Q92551 441 aa17.21■□□□□ 0.35
COPS4-208ENST00000510801 KIF7Q2M1P5 1343 aa17.21■□□□□ 0.34
COPS4-208ENST00000510801 RTL1A6NKG5 1358 aa17.2■□□□□ 0.34
COPS4-208ENST00000510801 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
COPS4-208ENST00000510801 CARD10Q9BWT7 1032 aa17.2■□□□□ 0.34
COPS4-208ENST00000510801 ERBB3P21860 1342 aa17.2■□□□□ 0.34
COPS4-208ENST00000510801 NSD2O96028 1365 aa17.19■□□□□ 0.34
COPS4-208ENST00000510801 CDCA7Q9BWT1 371 aaPredicted RBP17.19■□□□□ 0.34
COPS4-208ENST00000510801 GGNBP2Q9H3C7 697 aa17.19■□□□□ 0.34
COPS4-208ENST00000510801 SOX12O15370 315 aa17.18■□□□□ 0.34
COPS4-208ENST00000510801 PANK3Q9H999 370 aa17.18■□□□□ 0.34
COPS4-208ENST00000510801 MAP3K19Q56UN5 1328 aa17.18■□□□□ 0.34
COPS4-208ENST00000510801 CCDC7Q96M83 1385 aa17.17■□□□□ 0.34
COPS4-208ENST00000510801 TOM1L2Q6ZVM7 507 aa17.16■□□□□ 0.34
COPS4-208ENST00000510801 DISP2A7MBM2 1401 aa17.15■□□□□ 0.34
COPS4-208ENST00000510801 HOXC9P31274 260 aa17.15■□□□□ 0.34
COPS4-208ENST00000510801 ZBTB7CA1YPR0 619 aa17.14■□□□□ 0.33
COPS4-208ENST00000510801 ANKRD24Q8TF21 1146 aa17.13■□□□□ 0.33
COPS4-208ENST00000510801 POLR3GLQ9BT43 218 aa17.13■□□□□ 0.33
COPS4-208ENST00000510801 USP35Q9P2H5 1018 aa17.13■□□□□ 0.33
COPS4-208ENST00000510801 WASHC2AQ641Q2 1341 aa17.13■□□□□ 0.33
COPS4-208ENST00000510801 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
COPS4-208ENST00000510801 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
COPS4-208ENST00000510801 INSRP06213 1382 aa17.12■□□□□ 0.33
COPS4-208ENST00000510801 FLT4P35916 1363 aa17.12■□□□□ 0.33
COPS4-208ENST00000510801 LTN1O94822 1766 aa17.12■□□□□ 0.33
COPS4-208ENST00000510801 BCL9O00512 1426 aa17.12■□□□□ 0.33
COPS4-208ENST00000510801 PARP4Q9UKK3 1724 aaKnown RBP17.11■□□□□ 0.33
COPS4-208ENST00000510801 CSB-PGBD3P0DP91 1061 aa17.11■□□□□ 0.33
COPS4-208ENST00000510801 AMPHP49418 695 aa17.11■□□□□ 0.33
COPS4-208ENST00000510801 AMER1Q5JTC6 1135 aaPredicted RBP17.11■□□□□ 0.33
COPS4-208ENST00000510801 NPC1L1Q9UHC9 1359 aa17.11■□□□□ 0.33
COPS4-208ENST00000510801 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
COPS4-208ENST00000510801 A0A0G2JS52 829 aa17.1■□□□□ 0.33
COPS4-208ENST00000510801 FBLN1P23142 703 aa17.1■□□□□ 0.33
COPS4-208ENST00000510801 MYT1Q01538 1121 aa17.1■□□□□ 0.33
COPS4-208ENST00000510801 RRS1Q15050 365 aaKnown RBP17.1■□□□□ 0.33
COPS4-208ENST00000510801 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
COPS4-208ENST00000510801 KNSTRNQ9Y448 316 aa17.1■□□□□ 0.33
COPS4-208ENST00000510801 MSH5O43196 834 aa17.09■□□□□ 0.33
COPS4-208ENST00000510801 PIAS4Q8N2W9 510 aaPredicted RBP17.09■□□□□ 0.33
COPS4-208ENST00000510801 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
COPS4-208ENST00000510801 FAM208AQ9UK61 1670 aaKnown RBP17.07■□□□□ 0.32
COPS4-208ENST00000510801 SMG6Q86US8 1419 aaKnown RBP17.07■□□□□ 0.32
COPS4-208ENST00000510801 DDB1Q16531 1140 aa17.07■□□□□ 0.32
COPS4-208ENST00000510801 NLRP2Q9NX02 1062 aa17.07■□□□□ 0.32
COPS4-208ENST00000510801 POLKQ9UBT6 870 aa17.07■□□□□ 0.32
COPS4-208ENST00000510801 RGPD5Q99666 1765 aa17.07■□□□□ 0.32
COPS4-208ENST00000510801 IL2RBP14784 551 aa17.06■□□□□ 0.32
COPS4-208ENST00000510801 ANKRD26Q9UPS8 1709 aa17.06■□□□□ 0.32
COPS4-208ENST00000510801 NCAPD2Q15021 1401 aa17.05■□□□□ 0.32
COPS4-208ENST00000510801 TNS2Q63HR2 1409 aa17.05■□□□□ 0.32
COPS4-208ENST00000510801 ADRA2BP18089 450 aa17.05■□□□□ 0.32
COPS4-208ENST00000510801 EMILIN1Q9Y6C2 1016 aa17.05■□□□□ 0.32
COPS4-208ENST00000510801 OVOS2A0A0G2JMS6 1433 aa17.04■□□□□ 0.32
COPS4-208ENST00000510801 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
COPS4-208ENST00000510801 EXOC5O00471 708 aa17.04■□□□□ 0.32
COPS4-208ENST00000510801 HSP90AB2PQ58FF8 381 aa17.04■□□□□ 0.32
COPS4-208ENST00000510801 PLEKHG2Q9H7P9 1386 aa17.03■□□□□ 0.32
COPS4-208ENST00000510801 ZEB1P37275 1124 aaPredicted RBP17.03■□□□□ 0.32
COPS4-208ENST00000510801 PEAK1Q9H792 1746 aa17.03■□□□□ 0.32
COPS4-208ENST00000510801 WNK3Q9BYP7 1800 aa17.03■□□□□ 0.32
COPS4-208ENST00000510801 SF3B2Q13435 895 aaKnown RBP17.02■□□□□ 0.32
COPS4-208ENST00000510801 MORC1Q86VD1 984 aa17.02■□□□□ 0.32
COPS4-208ENST00000510801 NBPF6Q5VWK0 638 aa17.01■□□□□ 0.31
COPS4-208ENST00000510801 MARCH10Q8NA82 808 aaPredicted RBP17.01■□□□□ 0.31
COPS4-208ENST00000510801 NBPF4Q96M43 638 aa17.01■□□□□ 0.31
COPS4-208ENST00000510801 FAM182BQ5T319 152 aa17■□□□□ 0.31
COPS4-208ENST00000510801 LTV1Q96GA3 475 aaPredicted RBP16.99■□□□□ 0.31
COPS4-208ENST00000510801 PARD3Q8TEW0 1356 aa16.99■□□□□ 0.31
COPS4-208ENST00000510801 BAG6P46379 1132 aa16.98■□□□□ 0.31
COPS4-208ENST00000510801 RGPD1P0DJD0 1748 aa16.97■□□□□ 0.31
COPS4-208ENST00000510801 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
COPS4-208ENST00000510801 MEGF6O75095 1541 aa16.96■□□□□ 0.3
COPS4-208ENST00000510801 PPM1GO15355 546 aaPredicted RBP16.95■□□□□ 0.3
COPS4-208ENST00000510801 TRIM37O94972 964 aa16.95■□□□□ 0.3
COPS4-208ENST00000510801 EIF4A2Q14240 407 aaKnown RBP16.95■□□□□ 0.3
COPS4-208ENST00000510801 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.3
COPS4-208ENST00000510801 IGSF1Q8N6C5 1336 aa16.95■□□□□ 0.3
COPS4-208ENST00000510801 PLSCR1O15162 318 aa16.94■□□□□ 0.3
COPS4-208ENST00000510801 TNNT2P45379 298 aaPredicted RBP16.94■□□□□ 0.3
COPS4-208ENST00000510801 DEFB132Q7Z7B7 95 aa16.94■□□□□ 0.3
COPS4-208ENST00000510801 RAPGEF4Q8WZA2 1011 aa16.94■□□□□ 0.3
COPS4-208ENST00000510801 CAMKK2Q96RR4 588 aa16.94■□□□□ 0.3
COPS4-208ENST00000510801 EYA1Q99502 592 aa16.94■□□□□ 0.3
COPS4-208ENST00000510801 MAP2P11137 1827 aaKnown RBP16.93■□□□□ 0.3
COPS4-208ENST00000510801 TNS1Q9HBL0 1735 aaKnown RBP16.93■□□□□ 0.3
COPS4-208ENST00000510801 TATP17735 454 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms