RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 COL18A1P39060 1754 aa16.28■□□□□ 0.2
HMGXB3-203ENST00000510472 KIF7Q2M1P5 1343 aa16.27■□□□□ 0.2
HMGXB3-203ENST00000510472 ZBTB7CA1YPR0 619 aa16.27■□□□□ 0.2
HMGXB3-203ENST00000510472 FBLN1P23142 703 aa16.27■□□□□ 0.2
HMGXB3-203ENST00000510472 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
HMGXB3-203ENST00000510472 PANK3Q9H999 370 aa16.27■□□□□ 0.2
HMGXB3-203ENST00000510472 THRAP3Q9Y2W1 955 aaKnown RBP16.27■□□□□ 0.2
HMGXB3-203ENST00000510472 NSD3Q9BZ95 1437 aa16.27■□□□□ 0.19
HMGXB3-203ENST00000510472 WDR17Q8IZU2 1322 aa16.26■□□□□ 0.19
HMGXB3-203ENST00000510472 POLR3GLQ9BT43 218 aa16.26■□□□□ 0.19
HMGXB3-203ENST00000510472 MYOM1P52179 1685 aa16.26■□□□□ 0.19
HMGXB3-203ENST00000510472 MAP3K19Q56UN5 1328 aa16.25■□□□□ 0.19
HMGXB3-203ENST00000510472 IP6K1Q92551 441 aa16.25■□□□□ 0.19
HMGXB3-203ENST00000510472 CRB1P82279 1406 aa16.25■□□□□ 0.19
HMGXB3-203ENST00000510472 KRT27Q7Z3Y8 459 aa16.24■□□□□ 0.19
HMGXB3-203ENST00000510472 CARD10Q9BWT7 1032 aa16.24■□□□□ 0.19
HMGXB3-203ENST00000510472 USP35Q9P2H5 1018 aa16.24■□□□□ 0.19
HMGXB3-203ENST00000510472 ABCC6O95255 1503 aa16.24■□□□□ 0.19
HMGXB3-203ENST00000510472 CGNL1Q0VF96 1302 aa16.23■□□□□ 0.19
HMGXB3-203ENST00000510472 ERBB3P21860 1342 aa16.22■□□□□ 0.19
HMGXB3-203ENST00000510472 TOM1L2Q6ZVM7 507 aa16.22■□□□□ 0.19
HMGXB3-203ENST00000510472 HOXC9P31274 260 aa16.21■□□□□ 0.19
HMGXB3-203ENST00000510472 WASHC2AQ641Q2 1341 aa16.2■□□□□ 0.18
HMGXB3-203ENST00000510472 PER1O15534 1290 aaPredicted RBP16.2■□□□□ 0.18
HMGXB3-203ENST00000510472 RRS1Q15050 365 aaKnown RBP16.2■□□□□ 0.18
HMGXB3-203ENST00000510472 ANKRD24Q8TF21 1146 aa16.2■□□□□ 0.18
HMGXB3-203ENST00000510472 THSD7AQ9UPZ6 1657 aa16.2■□□□□ 0.18
HMGXB3-203ENST00000510472 BLMP54132 1417 aaPredicted RBP16.19■□□□□ 0.18
HMGXB3-203ENST00000510472 CCDC7Q96M83 1385 aa16.19■□□□□ 0.18
HMGXB3-203ENST00000510472 A0A0G2JS52 829 aa16.19■□□□□ 0.18
HMGXB3-203ENST00000510472 MYT1Q01538 1121 aa16.19■□□□□ 0.18
HMGXB3-203ENST00000510472 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
HMGXB3-203ENST00000510472 AMPHP49418 695 aa16.18■□□□□ 0.18
HMGXB3-203ENST00000510472 CCDC125Q86Z20 511 aa16.18■□□□□ 0.18
HMGXB3-203ENST00000510472 EP400Q96L91 3159 aa16.18■□□□□ 0.18
HMGXB3-203ENST00000510472 AMER1Q5JTC6 1135 aaPredicted RBP16.17■□□□□ 0.18
HMGXB3-203ENST00000510472 CDCA7Q9BWT1 371 aaPredicted RBP16.17■□□□□ 0.18
HMGXB3-203ENST00000510472 DISP2A7MBM2 1401 aa16.17■□□□□ 0.18
HMGXB3-203ENST00000510472 RTL1A6NKG5 1358 aa16.16■□□□□ 0.18
HMGXB3-203ENST00000510472 KIF24Q5T7B8 1368 aa16.16■□□□□ 0.18
HMGXB3-203ENST00000510472 HSP90AB2PQ58FF8 381 aa16.15■□□□□ 0.18
HMGXB3-203ENST00000510472 FAM182BQ5T319 152 aa16.15■□□□□ 0.18
HMGXB3-203ENST00000510472 NLRP2Q9NX02 1062 aa16.15■□□□□ 0.18
HMGXB3-203ENST00000510472 POLKQ9UBT6 870 aa16.15■□□□□ 0.18
HMGXB3-203ENST00000510472 KNSTRNQ9Y448 316 aa16.15■□□□□ 0.18
HMGXB3-203ENST00000510472 EMILIN1Q9Y6C2 1016 aa16.15■□□□□ 0.18
HMGXB3-203ENST00000510472 NSD2O96028 1365 aa16.14■□□□□ 0.17
HMGXB3-203ENST00000510472 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
HMGXB3-203ENST00000510472 BRWD3Q6RI45 1802 aa16.14■□□□□ 0.17
HMGXB3-203ENST00000510472 INSRP06213 1382 aa16.13■□□□□ 0.17
HMGXB3-203ENST00000510472 FAM196AQ6ZSG2 479 aa16.13■□□□□ 0.17
HMGXB3-203ENST00000510472 FLT4P35916 1363 aa16.13■□□□□ 0.17
HMGXB3-203ENST00000510472 DDB1Q16531 1140 aa16.12■□□□□ 0.17
HMGXB3-203ENST00000510472 LTV1Q96GA3 475 aaPredicted RBP16.12■□□□□ 0.17
HMGXB3-203ENST00000510472 RGPD5Q99666 1765 aa16.11■□□□□ 0.17
HMGXB3-203ENST00000510472 NBPF6Q5VWK0 638 aa16.11■□□□□ 0.17
HMGXB3-203ENST00000510472 NBPF4Q96M43 638 aa16.11■□□□□ 0.17
HMGXB3-203ENST00000510472 LTN1O94822 1766 aa16.1■□□□□ 0.17
HMGXB3-203ENST00000510472 EXOC5O00471 708 aa16.1■□□□□ 0.17
HMGXB3-203ENST00000510472 IL2RBP14784 551 aa16.1■□□□□ 0.17
HMGXB3-203ENST00000510472 MARCH10Q8NA82 808 aaPredicted RBP16.1■□□□□ 0.17
HMGXB3-203ENST00000510472 MORC1Q86VD1 984 aa16.09■□□□□ 0.17
HMGXB3-203ENST00000510472 KIF20BQ96Q89 1820 aa16.09■□□□□ 0.17
HMGXB3-203ENST00000510472 NPC1L1Q9UHC9 1359 aa16.09■□□□□ 0.17
HMGXB3-203ENST00000510472 TNNT2P45379 298 aaPredicted RBP16.08■□□□□ 0.16
HMGXB3-203ENST00000510472 BCL9O00512 1426 aa16.08■□□□□ 0.16
HMGXB3-203ENST00000510472 PEAK1Q9H792 1746 aa16.08■□□□□ 0.16
HMGXB3-203ENST00000510472 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
HMGXB3-203ENST00000510472 PPM1GO15355 546 aaPredicted RBP16.07■□□□□ 0.16
HMGXB3-203ENST00000510472 DEFB132Q7Z7B7 95 aa16.07■□□□□ 0.16
HMGXB3-203ENST00000510472 TRIM37O94972 964 aa16.06■□□□□ 0.16
HMGXB3-203ENST00000510472 SMG6Q86US8 1419 aaKnown RBP16.05■□□□□ 0.16
HMGXB3-203ENST00000510472 NCAPD2Q15021 1401 aa16.04■□□□□ 0.16
HMGXB3-203ENST00000510472 TNS2Q63HR2 1409 aa16.04■□□□□ 0.16
HMGXB3-203ENST00000510472 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
HMGXB3-203ENST00000510472 EIF4A2Q14240 407 aaKnown RBP16.04■□□□□ 0.16
HMGXB3-203ENST00000510472 EYA1Q99502 592 aa16.04■□□□□ 0.16
HMGXB3-203ENST00000510472 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
HMGXB3-203ENST00000510472 OVOS2A0A0G2JMS6 1433 aa16.03■□□□□ 0.16
HMGXB3-203ENST00000510472 USHBP1Q8N6Y0 703 aa16.03■□□□□ 0.16
HMGXB3-203ENST00000510472 ZEB1P37275 1124 aaPredicted RBP16.02■□□□□ 0.16
HMGXB3-203ENST00000510472 CC2D1BQ5T0F9 858 aaKnown RBP16.02■□□□□ 0.16
HMGXB3-203ENST00000510472 PTF1AQ7RTS3 328 aa16.02■□□□□ 0.16
HMGXB3-203ENST00000510472 BAG6P46379 1132 aa16.01■□□□□ 0.15
HMGXB3-203ENST00000510472 CAMKK2Q96RR4 588 aa16.01■□□□□ 0.15
HMGXB3-203ENST00000510472 BCL11BQ9C0K0 894 aaPredicted RBP16.01■□□□□ 0.15
HMGXB3-203ENST00000510472 ANKRD26Q9UPS8 1709 aa16.01■□□□□ 0.15
HMGXB3-203ENST00000510472 FAM208AQ9UK61 1670 aaKnown RBP16.01■□□□□ 0.15
HMGXB3-203ENST00000510472 MEGF6O75095 1541 aa16■□□□□ 0.15
HMGXB3-203ENST00000510472 APBA3O96018 575 aa16■□□□□ 0.15
HMGXB3-203ENST00000510472 EN1Q05925 392 aaPredicted RBP16■□□□□ 0.15
HMGXB3-203ENST00000510472 ZCRB1Q8TBF4 217 aaKnown RBP16■□□□□ 0.15
HMGXB3-203ENST00000510472 MTHFSP49914 203 aa15.99■□□□□ 0.15
HMGXB3-203ENST00000510472 RAPGEF4Q8WZA2 1011 aa15.99■□□□□ 0.15
HMGXB3-203ENST00000510472 WNK3Q9BYP7 1800 aa15.98■□□□□ 0.15
HMGXB3-203ENST00000510472 IGSF1Q8N6C5 1336 aa15.98■□□□□ 0.15
HMGXB3-203ENST00000510472 TATP17735 454 aaPredicted RBP15.98■□□□□ 0.15
HMGXB3-203ENST00000510472 IL13P35225 146 aa15.98■□□□□ 0.15
HMGXB3-203ENST00000510472 DDX54Q8TDD1 881 aaKnown RBP15.98■□□□□ 0.15
HMGXB3-203ENST00000510472 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms