RNA–Protein interactions for RNA: ENST00000509431.1

HMGCR-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 2

Gene HMGCR, Length 421 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-208ENST00000509431 ATP10DQ9P241 1426 aa20.38■□□□□ 0.85
HMGCR-208ENST00000509431 GPBP1L1Q9HC44 474 aaPredicted RBP20.38■□□□□ 0.85
HMGCR-208ENST00000509431 WNK3Q9BYP7 1800 aa20.37■□□□□ 0.85
HMGCR-208ENST00000509431 POLD1P28340 1107 aa20.37■□□□□ 0.85
HMGCR-208ENST00000509431 MARCH10Q8NA82 808 aaPredicted RBP20.37■□□□□ 0.85
HMGCR-208ENST00000509431 SLC16A10Q8TF71 515 aa20.37■□□□□ 0.85
HMGCR-208ENST00000509431 TOPAZ1Q8N9V7 1692 aa20.36■□□□□ 0.85
HMGCR-208ENST00000509431 KLHL34Q8N239 644 aa20.36■□□□□ 0.85
HMGCR-208ENST00000509431 ABTB2Q8N961 1025 aa20.36■□□□□ 0.85
HMGCR-208ENST00000509431 POLR3AO14802 1390 aaPredicted RBP20.35■□□□□ 0.85
HMGCR-208ENST00000509431 PAPPAQ13219 1627 aa20.35■□□□□ 0.85
HMGCR-208ENST00000509431 NUDT16Q96DE0 195 aaKnown RBP20.35■□□□□ 0.85
HMGCR-208ENST00000509431 COL24A1Q17RW2 1714 aa20.34■□□□□ 0.85
HMGCR-208ENST00000509431 GCP02774 474 aa20.34■□□□□ 0.85
HMGCR-208ENST00000509431 NLRP13Q86W25 1043 aa20.34■□□□□ 0.85
HMGCR-208ENST00000509431 TRAK1Q9UPV9 953 aa20.34■□□□□ 0.85
HMGCR-208ENST00000509431 ADGRB1O14514 1584 aa20.34■□□□□ 0.85
HMGCR-208ENST00000509431 TOM1L2Q6ZVM7 507 aa20.33■□□□□ 0.85
HMGCR-208ENST00000509431 QSER1Q2KHR3 1735 aa20.3■□□□□ 0.84
HMGCR-208ENST00000509431 ACEP12821 1306 aa20.3■□□□□ 0.84
HMGCR-208ENST00000509431 GOLGB1Q14789 3259 aaKnown RBP20.29■□□□□ 0.84
HMGCR-208ENST00000509431 NHSQ6T4R5 1651 aa20.29■□□□□ 0.84
HMGCR-208ENST00000509431 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
HMGCR-208ENST00000509431 APLP1P51693 650 aa20.28■□□□□ 0.84
HMGCR-208ENST00000509431 NLGN2Q8NFZ4 835 aa20.28■□□□□ 0.84
HMGCR-208ENST00000509431 WDR17Q8IZU2 1322 aa20.27■□□□□ 0.83
HMGCR-208ENST00000509431 ADCY9O60503 1353 aa20.26■□□□□ 0.83
HMGCR-208ENST00000509431 PLEKHG3A1L390 1219 aa20.26■□□□□ 0.83
HMGCR-208ENST00000509431 EXOC5O00471 708 aa20.26■□□□□ 0.83
HMGCR-208ENST00000509431 ZNF827Q17R98 1081 aa20.26■□□□□ 0.83
HMGCR-208ENST00000509431 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
HMGCR-208ENST00000509431 BRD4O60885 1362 aaPredicted RBP20.23■□□□□ 0.83
HMGCR-208ENST00000509431 COL18A1P39060 1754 aa20.22■□□□□ 0.83
HMGCR-208ENST00000509431 ZBTB7CA1YPR0 619 aa20.22■□□□□ 0.83
HMGCR-208ENST00000509431 PRELPP51888 382 aa20.21■□□□□ 0.83
HMGCR-208ENST00000509431 DNAJC5GQ8N7S2 189 aa20.21■□□□□ 0.83
HMGCR-208ENST00000509431 AKT1S1Q96B36 256 aa20.21■□□□□ 0.83
HMGCR-208ENST00000509431 MPHOSPH9Q99550 1183 aa20.21■□□□□ 0.83
HMGCR-208ENST00000509431 CARD10Q9BWT7 1032 aa20.21■□□□□ 0.83
HMGCR-208ENST00000509431 ARHGEF28Q8N1W1 1705 aaKnown RBP20.21■□□□□ 0.83
HMGCR-208ENST00000509431 TNS2Q63HR2 1409 aa20.2■□□□□ 0.82
HMGCR-208ENST00000509431 ZNF526Q8TF50 670 aaPredicted RBP20.2■□□□□ 0.82
HMGCR-208ENST00000509431 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
HMGCR-208ENST00000509431 BTAF1O14981 1849 aa20.2■□□□□ 0.82
HMGCR-208ENST00000509431 SLIT3O75094 1523 aa20.19■□□□□ 0.82
HMGCR-208ENST00000509431 USP6P35125 1406 aa20.19■□□□□ 0.82
HMGCR-208ENST00000509431 CAPN15O75808 1086 aa20.18■□□□□ 0.82
HMGCR-208ENST00000509431 PNPLA7Q6ZV29 1317 aa20.18■□□□□ 0.82
HMGCR-208ENST00000509431 KAT6BQ8WYB5 2073 aa20.17■□□□□ 0.82
HMGCR-208ENST00000509431 SLC27A3Q5K4L6 730 aa20.17■□□□□ 0.82
HMGCR-208ENST00000509431 COL13A1Q5TAT6 717 aaPredicted RBP20.17■□□□□ 0.82
HMGCR-208ENST00000509431 LRRC4BQ9NT99 713 aa20.17■□□□□ 0.82
HMGCR-208ENST00000509431 CCDC7Q96M83 1385 aa20.17■□□□□ 0.82
HMGCR-208ENST00000509431 KIF3CO14782 793 aa20.16■□□□□ 0.82
HMGCR-208ENST00000509431 ACSBG1Q96GR2 724 aa20.16■□□□□ 0.82
HMGCR-208ENST00000509431 ABCC6O95255 1503 aa20.16■□□□□ 0.82
HMGCR-208ENST00000509431 AXIN2Q9Y2T1 843 aa20.15■□□□□ 0.82
HMGCR-208ENST00000509431 TRPM1Q7Z4N2 1603 aa20.15■□□□□ 0.82
HMGCR-208ENST00000509431 TUBGCP6Q96RT7 1819 aa20.14■□□□□ 0.81
HMGCR-208ENST00000509431 CSB-PGBD3P0DP91 1061 aa20.14■□□□□ 0.81
HMGCR-208ENST00000509431 NLRP6P59044 892 aa20.14■□□□□ 0.81
HMGCR-208ENST00000509431 TNS4Q8IZW8 715 aa20.14■□□□□ 0.81
HMGCR-208ENST00000509431 TFCP2L1Q9NZI6 479 aa20.14■□□□□ 0.81
HMGCR-208ENST00000509431 CPSF1Q10570 1443 aaKnown RBP20.13■□□□□ 0.81
HMGCR-208ENST00000509431 RGPD5Q99666 1765 aa20.12■□□□□ 0.81
HMGCR-208ENST00000509431 CD2APQ9Y5K6 639 aa20.11■□□□□ 0.81
HMGCR-208ENST00000509431 PPIP5K1Q6PFW1 1433 aa20.1■□□□□ 0.81
HMGCR-208ENST00000509431 SLC34A2O95436 690 aa20.1■□□□□ 0.81
HMGCR-208ENST00000509431 TOMM70O94826 608 aa20.09■□□□□ 0.81
HMGCR-208ENST00000509431 ARHGEF25Q86VW2 580 aa20.09■□□□□ 0.81
HMGCR-208ENST00000509431 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
HMGCR-208ENST00000509431 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
HMGCR-208ENST00000509431 WDR90Q96KV7 1748 aa20.07■□□□□ 0.8
HMGCR-208ENST00000509431 PPARGC1BQ86YN6 1023 aaKnown RBP20.06■□□□□ 0.8
HMGCR-208ENST00000509431 KCNH5Q8NCM2 988 aa20.06■□□□□ 0.8
HMGCR-208ENST00000509431 KLRG1Q96E93 195 aa20.06■□□□□ 0.8
HMGCR-208ENST00000509431 PIK3C2AO00443 1686 aa20.03■□□□□ 0.8
HMGCR-208ENST00000509431 MSH5O43196 834 aa20.02■□□□□ 0.8
HMGCR-208ENST00000509431 KDM2AQ9Y2K7 1162 aa20.02■□□□□ 0.8
HMGCR-208ENST00000509431 IL2RBP14784 551 aa20.01■□□□□ 0.79
HMGCR-208ENST00000509431 LY75O60449 1722 aa20■□□□□ 0.79
HMGCR-208ENST00000509431 SRPK2P78362 688 aaKnown RBP20■□□□□ 0.79
HMGCR-208ENST00000509431 DCAF11Q8TEB1 546 aa20■□□□□ 0.79
HMGCR-208ENST00000509431 QRICH2Q9H0J4 1663 aa20■□□□□ 0.79
HMGCR-208ENST00000509431 COL23A1Q86Y22 540 aaPredicted RBP19.99■□□□□ 0.79
HMGCR-208ENST00000509431 RBM46Q8TBY0 533 aaKnown RBP19.97■□□□□ 0.79
HMGCR-208ENST00000509431 CICQ96RK0 1608 aaPredicted RBP19.96■□□□□ 0.79
HMGCR-208ENST00000509431 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
HMGCR-208ENST00000509431 MSL1Q68DK7 614 aa19.96■□□□□ 0.79
HMGCR-208ENST00000509431 PCDH10Q9P2E7 1040 aa19.96■□□□□ 0.79
HMGCR-208ENST00000509431 WWC3Q9ULE0 1092 aa19.95■□□□□ 0.78
HMGCR-208ENST00000509431 IGSF1Q8N6C5 1336 aa19.95■□□□□ 0.78
HMGCR-208ENST00000509431 NFAT5O94916 1531 aa19.94■□□□□ 0.78
HMGCR-208ENST00000509431 KCNQ4P56696 695 aa19.94■□□□□ 0.78
HMGCR-208ENST00000509431 FLAD1Q8NFF5 587 aa19.94■□□□□ 0.78
HMGCR-208ENST00000509431 NLRP2Q9NX02 1062 aa19.94■□□□□ 0.78
HMGCR-208ENST00000509431 CABP1Q9NZU7 370 aa19.94■□□□□ 0.78
HMGCR-208ENST00000509431 ERBB3P21860 1342 aa19.94■□□□□ 0.78
HMGCR-208ENST00000509431 CCNL1Q9UK58 526 aaPredicted RBP19.93■□□□□ 0.78
HMGCR-208ENST00000509431 SOX12O15370 315 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms