RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 USP35Q9P2H5 1018 aa20.22■□□□□ 0.83
SH3TC1-216ENST00000508641 FAM98CQ17RN3 349 aaKnown RBP20.21■□□□□ 0.83
SH3TC1-216ENST00000508641 CGNL1Q0VF96 1302 aa20.21■□□□□ 0.83
SH3TC1-216ENST00000508641 KIF20BQ96Q89 1820 aa20.2■□□□□ 0.82
SH3TC1-216ENST00000508641 A0A0G2JS52 829 aa20.2■□□□□ 0.82
SH3TC1-216ENST00000508641 MYT1Q01538 1121 aa20.2■□□□□ 0.82
SH3TC1-216ENST00000508641 COL18A1P39060 1754 aa20.2■□□□□ 0.82
SH3TC1-216ENST00000508641 CCDC7Q96M83 1385 aa20.2■□□□□ 0.82
SH3TC1-216ENST00000508641 SEPT12Q8IYM1 358 aa20.19■□□□□ 0.82
SH3TC1-216ENST00000508641 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
SH3TC1-216ENST00000508641 WASHC2AQ641Q2 1341 aa20.19■□□□□ 0.82
SH3TC1-216ENST00000508641 RGPD5Q99666 1765 aa20.18■□□□□ 0.82
SH3TC1-216ENST00000508641 COL5A2P05997 1499 aaPredicted RBP20.18■□□□□ 0.82
SH3TC1-216ENST00000508641 LTN1O94822 1766 aa20.18■□□□□ 0.82
SH3TC1-216ENST00000508641 ONECUT3O60422 494 aaPredicted RBP20.17■□□□□ 0.82
SH3TC1-216ENST00000508641 CSB-PGBD3P0DP91 1061 aa20.17■□□□□ 0.82
SH3TC1-216ENST00000508641 RRS1Q15050 365 aaKnown RBP20.16■□□□□ 0.82
SH3TC1-216ENST00000508641 TOM1L2Q6ZVM7 507 aa20.16■□□□□ 0.82
SH3TC1-216ENST00000508641 MAP3K19Q56UN5 1328 aa20.16■□□□□ 0.82
SH3TC1-216ENST00000508641 ZEB1P37275 1124 aaPredicted RBP20.15■□□□□ 0.82
SH3TC1-216ENST00000508641 AMPHP49418 695 aa20.15■□□□□ 0.82
SH3TC1-216ENST00000508641 KNSTRNQ9Y448 316 aa20.15■□□□□ 0.82
SH3TC1-216ENST00000508641 WDR17Q8IZU2 1322 aa20.14■□□□□ 0.81
SH3TC1-216ENST00000508641 TCP11L2Q8N4U5 519 aa20.14■□□□□ 0.81
SH3TC1-216ENST00000508641 IP6K1Q92551 441 aa20.14■□□□□ 0.81
SH3TC1-216ENST00000508641 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
SH3TC1-216ENST00000508641 LTV1Q96GA3 475 aaPredicted RBP20.13■□□□□ 0.81
SH3TC1-216ENST00000508641 CRB1P82279 1406 aa20.12■□□□□ 0.81
SH3TC1-216ENST00000508641 HOXC9P31274 260 aa20.11■□□□□ 0.81
SH3TC1-216ENST00000508641 ANKRD24Q8TF21 1146 aa20.11■□□□□ 0.81
SH3TC1-216ENST00000508641 ABCC6O95255 1503 aa20.11■□□□□ 0.81
SH3TC1-216ENST00000508641 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
SH3TC1-216ENST00000508641 BARGINQ6ZT62 677 aa20.1■□□□□ 0.81
SH3TC1-216ENST00000508641 NLRP2Q9NX02 1062 aa20.1■□□□□ 0.81
SH3TC1-216ENST00000508641 PPM1GO15355 546 aaPredicted RBP20.09■□□□□ 0.81
SH3TC1-216ENST00000508641 KRT27Q7Z3Y8 459 aa20.09■□□□□ 0.81
SH3TC1-216ENST00000508641 CARD10Q9BWT7 1032 aa20.09■□□□□ 0.81
SH3TC1-216ENST00000508641 THRAP3Q9Y2W1 955 aaKnown RBP20.09■□□□□ 0.81
SH3TC1-216ENST00000508641 ERBB3P21860 1342 aa20.08■□□□□ 0.81
SH3TC1-216ENST00000508641 CNGB1Q14028 1251 aaPredicted RBP20.08■□□□□ 0.81
SH3TC1-216ENST00000508641 MORC1Q86VD1 984 aa20.08■□□□□ 0.81
SH3TC1-216ENST00000508641 EMILIN1Q9Y6C2 1016 aa20.08■□□□□ 0.81
SH3TC1-216ENST00000508641 PER1O15534 1290 aaPredicted RBP20.07■□□□□ 0.8
SH3TC1-216ENST00000508641 BLMP54132 1417 aaPredicted RBP20.07■□□□□ 0.8
SH3TC1-216ENST00000508641 HSP90AB2PQ58FF8 381 aa20.06■□□□□ 0.8
SH3TC1-216ENST00000508641 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
SH3TC1-216ENST00000508641 UPF1Q92900 1129 aaKnown RBP eCLIP20.06■□□□□ 0.8
SH3TC1-216ENST00000508641 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
SH3TC1-216ENST00000508641 NSD2O96028 1365 aa20.06■□□□□ 0.8
SH3TC1-216ENST00000508641 FAM182BQ5T319 152 aa20.05■□□□□ 0.8
SH3TC1-216ENST00000508641 THSD7AQ9UPZ6 1657 aa20.05■□□□□ 0.8
SH3TC1-216ENST00000508641 RTL1A6NKG5 1358 aa20.05■□□□□ 0.8
SH3TC1-216ENST00000508641 MAP2P11137 1827 aaKnown RBP20.04■□□□□ 0.8
SH3TC1-216ENST00000508641 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
SH3TC1-216ENST00000508641 POLKQ9UBT6 870 aa20.04■□□□□ 0.8
SH3TC1-216ENST00000508641 PEAK1Q9H792 1746 aa20.03■□□□□ 0.8
SH3TC1-216ENST00000508641 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
SH3TC1-216ENST00000508641 FLT4P35916 1363 aa20.03■□□□□ 0.8
SH3TC1-216ENST00000508641 EP400Q96L91 3159 aa20.02■□□□□ 0.8
SH3TC1-216ENST00000508641 INSRP06213 1382 aa20■□□□□ 0.79
SH3TC1-216ENST00000508641 KIF24Q5T7B8 1368 aa20■□□□□ 0.79
SH3TC1-216ENST00000508641 DDB1Q16531 1140 aa20■□□□□ 0.79
SH3TC1-216ENST00000508641 CDCA7Q9BWT1 371 aaPredicted RBP20■□□□□ 0.79
SH3TC1-216ENST00000508641 NBPF6Q5VWK0 638 aa19.98■□□□□ 0.79
SH3TC1-216ENST00000508641 USHBP1Q8N6Y0 703 aa19.98■□□□□ 0.79
SH3TC1-216ENST00000508641 NBPF4Q96M43 638 aa19.98■□□□□ 0.79
SH3TC1-216ENST00000508641 SMG6Q86US8 1419 aaKnown RBP19.98■□□□□ 0.79
SH3TC1-216ENST00000508641 RGPD2P0DJD1 1756 aa19.98■□□□□ 0.79
SH3TC1-216ENST00000508641 IL2RBP14784 551 aa19.97■□□□□ 0.79
SH3TC1-216ENST00000508641 PARP4Q9UKK3 1724 aaKnown RBP19.96■□□□□ 0.79
SH3TC1-216ENST00000508641 EXOC5O00471 708 aa19.96■□□□□ 0.79
SH3TC1-216ENST00000508641 WNK3Q9BYP7 1800 aa19.96■□□□□ 0.79
SH3TC1-216ENST00000508641 FAM208AQ9UK61 1670 aaKnown RBP19.96■□□□□ 0.79
SH3TC1-216ENST00000508641 DISP2A7MBM2 1401 aa19.95■□□□□ 0.78
SH3TC1-216ENST00000508641 FAM196AQ6ZSG2 479 aa19.94■□□□□ 0.78
SH3TC1-216ENST00000508641 LRRC37A3O60309 1634 aa19.94■□□□□ 0.78
SH3TC1-216ENST00000508641 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
SH3TC1-216ENST00000508641 CCDC125Q86Z20 511 aa19.93■□□□□ 0.78
SH3TC1-216ENST00000508641 NPC1L1Q9UHC9 1359 aa19.93■□□□□ 0.78
SH3TC1-216ENST00000508641 EIF4A2Q14240 407 aaKnown RBP19.92■□□□□ 0.78
SH3TC1-216ENST00000508641 MARCH10Q8NA82 808 aaPredicted RBP19.92■□□□□ 0.78
SH3TC1-216ENST00000508641 MTHFSP49914 203 aa19.91■□□□□ 0.78
SH3TC1-216ENST00000508641 SF3B2Q13435 895 aaKnown RBP19.91■□□□□ 0.78
SH3TC1-216ENST00000508641 TRIM37O94972 964 aa19.9■□□□□ 0.78
SH3TC1-216ENST00000508641 EYA1Q99502 592 aa19.9■□□□□ 0.78
SH3TC1-216ENST00000508641 RAPGEF4Q8WZA2 1011 aa19.89■□□□□ 0.77
SH3TC1-216ENST00000508641 DDX54Q8TDD1 881 aaKnown RBP19.88■□□□□ 0.77
SH3TC1-216ENST00000508641 OVOS2A0A0G2JMS6 1433 aa19.87■□□□□ 0.77
SH3TC1-216ENST00000508641 TNS2Q63HR2 1409 aa19.87■□□□□ 0.77
SH3TC1-216ENST00000508641 TATP17735 454 aaPredicted RBP19.87■□□□□ 0.77
SH3TC1-216ENST00000508641 DEFB132Q7Z7B7 95 aa19.87■□□□□ 0.77
SH3TC1-216ENST00000508641 MEGF6O75095 1541 aa19.86■□□□□ 0.77
SH3TC1-216ENST00000508641 ZCRB1Q8TBF4 217 aaKnown RBP19.86■□□□□ 0.77
SH3TC1-216ENST00000508641 APBA3O96018 575 aa19.82■□□□□ 0.76
SH3TC1-216ENST00000508641 IL13P35225 146 aa19.82■□□□□ 0.76
SH3TC1-216ENST00000508641 BAG6P46379 1132 aa19.82■□□□□ 0.76
SH3TC1-216ENST00000508641 RGPD1P0DJD0 1748 aa19.82■□□□□ 0.76
SH3TC1-216ENST00000508641 PPP2R1AP30153 589 aa19.81■□□□□ 0.76
SH3TC1-216ENST00000508641 EN1Q05925 392 aaPredicted RBP19.81■□□□□ 0.76
SH3TC1-216ENST00000508641 PTF1AQ7RTS3 328 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms