RNA–Protein interactions for RNA: ENST00000508550.5

CCSER1-207, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 3

Gene CCSER1, Length 716 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-207ENST00000508550 NRXN1Q9ULB1 1477 aa11.25□□□□□ -0.61
CCSER1-207ENST00000508550 LAMC1P11047 1609 aa11.24□□□□□ -0.61
CCSER1-207ENST00000508550 SPHKAPQ2M3C7 1700 aa11.24□□□□□ -0.61
CCSER1-207ENST00000508550 SAMD7Q7Z3H4 446 aa11.24□□□□□ -0.61
CCSER1-207ENST00000508550 USP47Q96K76 1375 aa11.24□□□□□ -0.61
CCSER1-207ENST00000508550 PPP4CP60510 307 aa11.23□□□□□ -0.61
CCSER1-207ENST00000508550 KCNC4Q03721 635 aa11.23□□□□□ -0.61
CCSER1-207ENST00000508550 PNMA3Q9UL41 463 aa11.23□□□□□ -0.61
CCSER1-207ENST00000508550 ADGRB3O60242 1522 aa11.22□□□□□ -0.61
CCSER1-207ENST00000508550 RGL3Q3MIN7 710 aa11.22□□□□□ -0.61
CCSER1-207ENST00000508550 KCNV2Q8TDN2 545 aa11.22□□□□□ -0.61
CCSER1-207ENST00000508550 NUDT18Q6ZVK8 323 aa11.21□□□□□ -0.61
CCSER1-207ENST00000508550 CLTCL1P53675 1640 aa11.2□□□□□ -0.62
CCSER1-207ENST00000508550 CCDC7Q96M83 1385 aa11.2□□□□□ -0.62
CCSER1-207ENST00000508550 ESF1Q9H501 851 aaKnown RBP11.2□□□□□ -0.62
CCSER1-207ENST00000508550 CEP152O94986 1710 aa11.2□□□□□ -0.62
CCSER1-207ENST00000508550 PIK3C2BO00750 1634 aa11.2□□□□□ -0.62
CCSER1-207ENST00000508550 CAMSAP1Q5T5Y3 1602 aa11.2□□□□□ -0.62
CCSER1-207ENST00000508550 EIF3AQ14152 1382 aaKnown RBP11.19□□□□□ -0.62
CCSER1-207ENST00000508550 WASHC2AQ641Q2 1341 aa11.19□□□□□ -0.62
CCSER1-207ENST00000508550 CCER2I3L3R5 266 aa11.19□□□□□ -0.62
CCSER1-207ENST00000508550 MLLT3P42568 568 aaPredicted RBP11.19□□□□□ -0.62
CCSER1-207ENST00000508550 HDGFP51858 240 aaKnown RBP11.19□□□□□ -0.62
CCSER1-207ENST00000508550 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
CCSER1-207ENST00000508550 KDM2AQ9Y2K7 1162 aa11.19□□□□□ -0.62
CCSER1-207ENST00000508550 ERVK-7P63135 1459 aa11.19□□□□□ -0.62
CCSER1-207ENST00000508550 ZMYM3Q14202 1370 aa11.18□□□□□ -0.62
CCSER1-207ENST00000508550 IDI1Q13907 227 aa11.18□□□□□ -0.62
CCSER1-207ENST00000508550 PUS7Q96PZ0 661 aaKnown RBP11.18□□□□□ -0.62
CCSER1-207ENST00000508550 C14orf93Q9H972 538 aaKnown RBP11.18□□□□□ -0.62
CCSER1-207ENST00000508550 SPATA31D1Q6ZQQ2 1576 aa11.18□□□□□ -0.62
CCSER1-207ENST00000508550 SCAF11Q99590 1463 aaKnown RBP11.18□□□□□ -0.62
CCSER1-207ENST00000508550 KIAA1210Q9ULL0 1709 aa11.18□□□□□ -0.62
CCSER1-207ENST00000508550 SBNO2Q9Y2G9 1366 aa11.17□□□□□ -0.62
CCSER1-207ENST00000508550 TJAP1Q5JTD0 557 aa11.17□□□□□ -0.62
CCSER1-207ENST00000508550 PADI6Q6TGC4 694 aa11.17□□□□□ -0.62
CCSER1-207ENST00000508550 PIK3C2GO75747 1445 aa11.17□□□□□ -0.62
CCSER1-207ENST00000508550 KTN1Q86UP2 1357 aaKnown RBP11.16□□□□□ -0.62
CCSER1-207ENST00000508550 ANP32CO43423 234 aa11.16□□□□□ -0.62
CCSER1-207ENST00000508550 DDX10Q13206 875 aaKnown RBP11.16□□□□□ -0.62
CCSER1-207ENST00000508550 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.16□□□□□ -0.62
CCSER1-207ENST00000508550 TRPM1Q7Z4N2 1603 aa11.16□□□□□ -0.62
CCSER1-207ENST00000508550 SETBP1Q9Y6X0 1596 aa11.16□□□□□ -0.62
CCSER1-207ENST00000508550 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
CCSER1-207ENST00000508550 ST20-MTHFSA0A0A6YYL1 179 aa11.15□□□□□ -0.62
CCSER1-207ENST00000508550 ZNF326Q5BKZ1 582 aaKnown RBP11.15□□□□□ -0.62
CCSER1-207ENST00000508550 EYA1Q99502 592 aa11.15□□□□□ -0.62
CCSER1-207ENST00000508550 TSPOAP1O95153 1857 aa11.15□□□□□ -0.63
CCSER1-207ENST00000508550 MADDQ8WXG6 1647 aa11.14□□□□□ -0.63
CCSER1-207ENST00000508550 TMF1P82094 1093 aa11.14□□□□□ -0.63
CCSER1-207ENST00000508550 NBPF1Q3BBV0 1214 aa11.14□□□□□ -0.63
CCSER1-207ENST00000508550 TESK2Q96S53 571 aa11.14□□□□□ -0.63
CCSER1-207ENST00000508550 SYNMO15061 1565 aa11.14□□□□□ -0.63
CCSER1-207ENST00000508550 NLRP1Q9C000 1473 aa11.12□□□□□ -0.63
CCSER1-207ENST00000508550 PTGDRQ13258 359 aa11.12□□□□□ -0.63
CCSER1-207ENST00000508550 IRX2Q9BZI1 471 aaPredicted RBP11.12□□□□□ -0.63
CCSER1-207ENST00000508550 KIF1BO60333 1816 aa11.12□□□□□ -0.63
CCSER1-207ENST00000508550 ADGRF5Q8IZF2 1346 aa11.11□□□□□ -0.63
CCSER1-207ENST00000508550 C11orf95C9JLR9 678 aaPredicted RBP11.11□□□□□ -0.63
CCSER1-207ENST00000508550 UGGT1Q9NYU2 1555 aa11.11□□□□□ -0.63
CCSER1-207ENST00000508550 MROH2AA6NES4 1674 aa11.11□□□□□ -0.63
CCSER1-207ENST00000508550 KDM5AP29375 1690 aaKnown RBP11.11□□□□□ -0.63
CCSER1-207ENST00000508550 NECTIN2Q92692 538 aa11.1□□□□□ -0.63
CCSER1-207ENST00000508550 SIRT1Q96EB6 747 aa11.1□□□□□ -0.63
CCSER1-207ENST00000508550 PREX1Q8TCU6 1659 aa11.1□□□□□ -0.63
CCSER1-207ENST00000508550 NEXMIFQ5QGS0 1516 aa11.09□□□□□ -0.63
CCSER1-207ENST00000508550 TNRQ92752 1358 aa11.09□□□□□ -0.63
CCSER1-207ENST00000508550 APLP1P51693 650 aa11.09□□□□□ -0.63
CCSER1-207ENST00000508550 SWT1Q5T5J6 900 aaKnown RBP11.09□□□□□ -0.63
CCSER1-207ENST00000508550 FBXO31Q5XUX0 539 aaPredicted RBP11.09□□□□□ -0.63
CCSER1-207ENST00000508550 SLF2Q8IX21 1173 aa11.09□□□□□ -0.63
CCSER1-207ENST00000508550 MTRQ99707 1265 aa11.09□□□□□ -0.63
CCSER1-207ENST00000508550 HIRIP3Q9BW71 556 aaPredicted RBP11.09□□□□□ -0.63
CCSER1-207ENST00000508550 IL21Q9HBE4 155 aa11.09□□□□□ -0.63
CCSER1-207ENST00000508550 A2ML1A8K2U0 1454 aa11.08□□□□□ -0.64
CCSER1-207ENST00000508550 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
CCSER1-207ENST00000508550 IFT172Q9UG01 1749 aa11.08□□□□□ -0.64
CCSER1-207ENST00000508550 TMEM131LA2VDJ0 1609 aa11.08□□□□□ -0.64
CCSER1-207ENST00000508550 CENPBP07199 599 aaPredicted RBP11.07□□□□□ -0.64
CCSER1-207ENST00000508550 ADGRB1O14514 1584 aa11.07□□□□□ -0.64
CCSER1-207ENST00000508550 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
CCSER1-207ENST00000508550 NPC1L1Q9UHC9 1359 aa11.05□□□□□ -0.64
CCSER1-207ENST00000508550 POLR1AO95602 1720 aaPredicted RBP11.05□□□□□ -0.64
CCSER1-207ENST00000508550 PLCB2Q00722 1185 aa11.05□□□□□ -0.64
CCSER1-207ENST00000508550 RALBP1Q15311 655 aa11.05□□□□□ -0.64
CCSER1-207ENST00000508550 PRKRIP1Q9H875 184 aaPredicted RBP11.05□□□□□ -0.64
CCSER1-207ENST00000508550 TMEM2Q9UHN6 1383 aa11.04□□□□□ -0.64
CCSER1-207ENST00000508550 PPLO60437 1756 aa11.04□□□□□ -0.64
CCSER1-207ENST00000508550 SEMA3EO15041 775 aa11.04□□□□□ -0.64
CCSER1-207ENST00000508550 MLECQ14165 292 aa11.04□□□□□ -0.64
CCSER1-207ENST00000508550 ADGRG1Q9Y653 693 aa11.04□□□□□ -0.64
CCSER1-207ENST00000508550 CENPJQ9HC77 1338 aaPredicted RBP11.04□□□□□ -0.64
CCSER1-207ENST00000508550 ABCC11Q96J66 1382 aa11.03□□□□□ -0.64
CCSER1-207ENST00000508550 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
CCSER1-207ENST00000508550 RIMS2Q9UQ26 1411 aa11.03□□□□□ -0.64
CCSER1-207ENST00000508550 PER1O15534 1290 aaPredicted RBP11.03□□□□□ -0.64
CCSER1-207ENST00000508550 RNF40O75150 1001 aa11.03□□□□□ -0.64
CCSER1-207ENST00000508550 THEMISQ8N1K5 641 aaPredicted RBP11.03□□□□□ -0.64
CCSER1-207ENST00000508550 ZNF516Q92618 1163 aa11.03□□□□□ -0.64
CCSER1-207ENST00000508550 IQGAP1P46940 1657 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms