RNA–Protein interactions for RNA: ENST00000507785.2

MSX2-202, Transcript of msh homeobox 2, humanhuman

TSL 2 BASIC

Gene MSX2, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX2-202ENST00000507785 KIF7Q2M1P5 1343 aa38.71■■■■□ 3.79
MSX2-202ENST00000507785 EVA1CP58658 441 aa38.7■■■■□ 3.79
MSX2-202ENST00000507785 AXIN2Q9Y2T1 843 aa38.7■■■■□ 3.79
MSX2-202ENST00000507785 SPATA31A1Q5TZJ5 1347 aa38.69■■■■□ 3.78
MSX2-202ENST00000507785 GGNBP2Q9H3C7 697 aa38.69■■■■□ 3.78
MSX2-202ENST00000507785 BRWD3Q6RI45 1802 aa38.68■■■■□ 3.78
MSX2-202ENST00000507785 LARP1Q6PKG0 1096 aaKnown RBP38.68■■■■□ 3.78
MSX2-202ENST00000507785 PANK3Q9H999 370 aa38.64■■■■□ 3.78
MSX2-202ENST00000507785 EP400Q96L91 3159 aa38.64■■■■□ 3.78
MSX2-202ENST00000507785 FAM98CQ17RN3 349 aaKnown RBP38.63■■■■□ 3.77
MSX2-202ENST00000507785 THSD7AQ9UPZ6 1657 aa38.62■■■■□ 3.77
MSX2-202ENST00000507785 SEPT12Q8IYM1 358 aa38.62■■■■□ 3.77
MSX2-202ENST00000507785 CRB1P82279 1406 aa38.59■■■■□ 3.77
MSX2-202ENST00000507785 CGNL1Q0VF96 1302 aa38.59■■■■□ 3.77
MSX2-202ENST00000507785 WDR17Q8IZU2 1322 aa38.58■■■■□ 3.77
MSX2-202ENST00000507785 FBLN1P23142 703 aa38.57■■■■□ 3.76
MSX2-202ENST00000507785 CCDC7Q96M83 1385 aa38.57■■■■□ 3.76
MSX2-202ENST00000507785 ANKRD26Q9UPS8 1709 aa38.55■■■■□ 3.76
MSX2-202ENST00000507785 USP35Q9P2H5 1018 aa38.55■■■■□ 3.76
MSX2-202ENST00000507785 MAP3K19Q56UN5 1328 aa38.55■■■■□ 3.76
MSX2-202ENST00000507785 BARGINQ6ZT62 677 aa38.54■■■■□ 3.76
MSX2-202ENST00000507785 WASHC2AQ641Q2 1341 aa38.54■■■■□ 3.76
MSX2-202ENST00000507785 TCP11L2Q8N4U5 519 aa38.53■■■■□ 3.76
MSX2-202ENST00000507785 THRAP3Q9Y2W1 955 aaKnown RBP38.52■■■■□ 3.76
MSX2-202ENST00000507785 IP6K1Q92551 441 aa38.51■■■■□ 3.76
MSX2-202ENST00000507785 BLMP54132 1417 aaPredicted RBP38.51■■■■□ 3.76
MSX2-202ENST00000507785 TOM1L2Q6ZVM7 507 aa38.5■■■■□ 3.75
MSX2-202ENST00000507785 UPF1Q92900 1129 aaKnown RBP eCLIP38.5■■■■□ 3.75
MSX2-202ENST00000507785 ERBB3P21860 1342 aa38.49■■■■□ 3.75
MSX2-202ENST00000507785 WNK3Q9BYP7 1800 aa38.48■■■■□ 3.75
MSX2-202ENST00000507785 A0A0G2JS52 829 aa38.48■■■■□ 3.75
MSX2-202ENST00000507785 MYT1Q01538 1121 aa38.48■■■■□ 3.75
MSX2-202ENST00000507785 RRS1Q15050 365 aaKnown RBP38.47■■■■□ 3.75
MSX2-202ENST00000507785 CSB-PGBD3P0DP91 1061 aa38.46■■■■□ 3.75
MSX2-202ENST00000507785 KRT27Q7Z3Y8 459 aa38.46■■■■□ 3.75
MSX2-202ENST00000507785 RTL1A6NKG5 1358 aa38.45■■■■□ 3.75
MSX2-202ENST00000507785 HOXC9P31274 260 aa38.45■■■■□ 3.75
MSX2-202ENST00000507785 CARD10Q9BWT7 1032 aa38.45■■■■□ 3.75
MSX2-202ENST00000507785 PEAK1Q9H792 1746 aa38.45■■■■□ 3.75
MSX2-202ENST00000507785 PARP4Q9UKK3 1724 aaKnown RBP38.44■■■■□ 3.74
MSX2-202ENST00000507785 ANKRD24Q8TF21 1146 aa38.44■■■■□ 3.74
MSX2-202ENST00000507785 NSD2O96028 1365 aa38.44■■■■□ 3.74
MSX2-202ENST00000507785 AMPHP49418 695 aa38.43■■■■□ 3.74
MSX2-202ENST00000507785 MAP2P11137 1827 aaKnown RBP38.42■■■■□ 3.74
MSX2-202ENST00000507785 FAM208AQ9UK61 1670 aaKnown RBP38.41■■■■□ 3.74
MSX2-202ENST00000507785 KNSTRNQ9Y448 316 aa38.39■■■■□ 3.74
MSX2-202ENST00000507785 KIF24Q5T7B8 1368 aa38.39■■■■□ 3.74
MSX2-202ENST00000507785 PER1O15534 1290 aaPredicted RBP38.37■■■■□ 3.73
MSX2-202ENST00000507785 DISP2A7MBM2 1401 aa38.37■■■■□ 3.73
MSX2-202ENST00000507785 AMER1Q5JTC6 1135 aaPredicted RBP38.36■■■■□ 3.73
MSX2-202ENST00000507785 LRRC37A3O60309 1634 aa38.35■■■■□ 3.73
MSX2-202ENST00000507785 FLT4P35916 1363 aa38.34■■■■□ 3.73
MSX2-202ENST00000507785 NLRP2Q9NX02 1062 aa38.34■■■■□ 3.73
MSX2-202ENST00000507785 EMILIN1Q9Y6C2 1016 aa38.34■■■■□ 3.73
MSX2-202ENST00000507785 RGPD2P0DJD1 1756 aa38.34■■■■□ 3.73
MSX2-202ENST00000507785 LTV1Q96GA3 475 aaPredicted RBP38.33■■■■□ 3.73
MSX2-202ENST00000507785 INSRP06213 1382 aa38.31■■■■□ 3.72
MSX2-202ENST00000507785 HSP90AB2PQ58FF8 381 aa38.3■■■■□ 3.72
MSX2-202ENST00000507785 CDCA7Q9BWT1 371 aaPredicted RBP38.3■■■■□ 3.72
MSX2-202ENST00000507785 POLKQ9UBT6 870 aa38.29■■■■□ 3.72
MSX2-202ENST00000507785 FAM182BQ5T319 152 aa38.28■■■■□ 3.72
MSX2-202ENST00000507785 ZEB1P37275 1124 aaPredicted RBP38.27■■■■□ 3.72
MSX2-202ENST00000507785 TNNT2P45379 298 aaPredicted RBP38.27■■■■□ 3.72
MSX2-202ENST00000507785 PDE3BQ13370 1112 aa38.25■■■■□ 3.71
MSX2-202ENST00000507785 MORC1Q86VD1 984 aa38.25■■■■□ 3.71
MSX2-202ENST00000507785 DDB1Q16531 1140 aa38.23■■■■□ 3.71
MSX2-202ENST00000507785 CCDC125Q86Z20 511 aa38.23■■■■□ 3.71
MSX2-202ENST00000507785 SMG6Q86US8 1419 aaKnown RBP38.22■■■■□ 3.71
MSX2-202ENST00000507785 NPC1L1Q9UHC9 1359 aa38.21■■■■□ 3.71
MSX2-202ENST00000507785 PPM1GO15355 546 aaPredicted RBP38.2■■■■□ 3.71
MSX2-202ENST00000507785 IL2RBP14784 551 aa38.19■■■■□ 3.7
MSX2-202ENST00000507785 NBPF6Q5VWK0 638 aa38.18■■■■□ 3.7
MSX2-202ENST00000507785 NBPF4Q96M43 638 aa38.18■■■■□ 3.7
MSX2-202ENST00000507785 TNS2Q63HR2 1409 aa38.18■■■■□ 3.7
MSX2-202ENST00000507785 FAM196AQ6ZSG2 479 aa38.17■■■■□ 3.7
MSX2-202ENST00000507785 RGPD1P0DJD0 1748 aa38.15■■■■□ 3.7
MSX2-202ENST00000507785 CC2D1BQ5T0F9 858 aaKnown RBP38.14■■■■□ 3.7
MSX2-202ENST00000507785 EXOC5O00471 708 aa38.13■■■■□ 3.69
MSX2-202ENST00000507785 OVOS2A0A0G2JMS6 1433 aa38.12■■■■□ 3.69
MSX2-202ENST00000507785 TNS1Q9HBL0 1735 aaKnown RBP38.12■■■■□ 3.69
MSX2-202ENST00000507785 MARCH10Q8NA82 808 aaPredicted RBP38.12■■■■□ 3.69
MSX2-202ENST00000507785 SBF2Q86WG5 1849 aa38.1■■■■□ 3.69
MSX2-202ENST00000507785 NCAPD2Q15021 1401 aa38.1■■■■□ 3.69
MSX2-202ENST00000507785 MEGF6O75095 1541 aa38.09■■■■□ 3.69
MSX2-202ENST00000507785 USHBP1Q8N6Y0 703 aa38.09■■■■□ 3.69
MSX2-202ENST00000507785 BCL9O00512 1426 aa38.07■■■■□ 3.69
MSX2-202ENST00000507785 EIF4A2Q14240 407 aaKnown RBP38.06■■■■□ 3.68
MSX2-202ENST00000507785 SHANK3Q9BYB0 1731 aa38.04■■■■□ 3.68
MSX2-202ENST00000507785 TRIM37O94972 964 aa38.04■■■■□ 3.68
MSX2-202ENST00000507785 SF3B2Q13435 895 aaKnown RBP38.04■■■■□ 3.68
MSX2-202ENST00000507785 EYA1Q99502 592 aa38.03■■■■□ 3.68
MSX2-202ENST00000507785 DEFB132Q7Z7B7 95 aa38.01■■■■□ 3.68
MSX2-202ENST00000507785 CNGB1Q14028 1251 aaPredicted RBP37.98■■■■□ 3.67
MSX2-202ENST00000507785 RAPGEF4Q8WZA2 1011 aa37.98■■■■□ 3.67
MSX2-202ENST00000507785 MTHFSP49914 203 aa37.97■■■■□ 3.67
MSX2-202ENST00000507785 ZCRB1Q8TBF4 217 aaKnown RBP37.95■■■■□ 3.67
MSX2-202ENST00000507785 IGSF1Q8N6C5 1336 aa37.94■■■■□ 3.66
MSX2-202ENST00000507785 TATP17735 454 aaPredicted RBP37.94■■■■□ 3.66
MSX2-202ENST00000507785 BAG6P46379 1132 aa37.94■■■■□ 3.66
MSX2-202ENST00000507785 PKD1L3Q7Z443 1732 aa37.92■■■■□ 3.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms