RNA–Protein interactions for RNA: ENST00000507594.1

SMAD1-207, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 558 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-207ENST00000507594 SLIT3O75094 1523 aa12.21□□□□□ -0.46
SMAD1-207ENST00000507594 LTN1O94822 1766 aa12.2□□□□□ -0.46
SMAD1-207ENST00000507594 USP19O94966 1318 aa12.2□□□□□ -0.46
SMAD1-207ENST00000507594 SPATA31A6Q5VVP1 1343 aa12.2□□□□□ -0.46
SMAD1-207ENST00000507594 GCP02774 474 aa12.2□□□□□ -0.46
SMAD1-207ENST00000507594 C1QBPQ07021 282 aaKnown RBP12.2□□□□□ -0.46
SMAD1-207ENST00000507594 RRS1Q15050 365 aaKnown RBP12.2□□□□□ -0.46
SMAD1-207ENST00000507594 RALBP1Q15311 655 aa12.2□□□□□ -0.46
SMAD1-207ENST00000507594 CRYBG1Q9Y4K1 1723 aa12.2□□□□□ -0.46
SMAD1-207ENST00000507594 CAPN15O75808 1086 aa12.19□□□□□ -0.46
SMAD1-207ENST00000507594 PLCB2Q00722 1185 aa12.19□□□□□ -0.46
SMAD1-207ENST00000507594 KIAA0232Q92628 1395 aa12.18□□□□□ -0.46
SMAD1-207ENST00000507594 MAP2P11137 1827 aaKnown RBP12.18□□□□□ -0.46
SMAD1-207ENST00000507594 FBLN1P23142 703 aa12.18□□□□□ -0.46
SMAD1-207ENST00000507594 CHRNA2Q15822 529 aa12.18□□□□□ -0.46
SMAD1-207ENST00000507594 C8orf37Q96NL8 207 aa12.18□□□□□ -0.46
SMAD1-207ENST00000507594 NFAT5O94916 1531 aa12.17□□□□□ -0.46
SMAD1-207ENST00000507594 MYBBP1AQ9BQG0 1328 aaKnown RBP12.17□□□□□ -0.46
SMAD1-207ENST00000507594 LTV1Q96GA3 475 aaPredicted RBP12.17□□□□□ -0.46
SMAD1-207ENST00000507594 CFAP53Q96M91 514 aa12.17□□□□□ -0.46
SMAD1-207ENST00000507594 PRKRIP1Q9H875 184 aaPredicted RBP12.17□□□□□ -0.46
SMAD1-207ENST00000507594 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
SMAD1-207ENST00000507594 PARD3Q8TEW0 1356 aa12.17□□□□□ -0.46
SMAD1-207ENST00000507594 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
SMAD1-207ENST00000507594 PPP2R1AP30153 589 aa12.16□□□□□ -0.46
SMAD1-207ENST00000507594 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
SMAD1-207ENST00000507594 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
SMAD1-207ENST00000507594 SMG6Q86US8 1419 aaKnown RBP12.16□□□□□ -0.46
SMAD1-207ENST00000507594 MAP3K19Q56UN5 1328 aa12.15□□□□□ -0.46
SMAD1-207ENST00000507594 NGLY1Q96IV0 654 aa12.15□□□□□ -0.46
SMAD1-207ENST00000507594 FLT4P35916 1363 aa12.15□□□□□ -0.46
SMAD1-207ENST00000507594 AATKQ6ZMQ8 1374 aa12.15□□□□□ -0.46
SMAD1-207ENST00000507594 COL14A1Q05707 1796 aaKnown RBP12.15□□□□□ -0.46
SMAD1-207ENST00000507594 LRP6O75581 1613 aa12.15□□□□□ -0.47
SMAD1-207ENST00000507594 PLCH1Q4KWH8 1693 aa12.14□□□□□ -0.47
SMAD1-207ENST00000507594 MTHFSP49914 203 aa12.14□□□□□ -0.47
SMAD1-207ENST00000507594 EVA1CP58658 441 aa12.14□□□□□ -0.47
SMAD1-207ENST00000507594 STRN4Q9NRL3 753 aa12.14□□□□□ -0.47
SMAD1-207ENST00000507594 CCDC9Q9Y3X0 531 aaKnown RBP12.14□□□□□ -0.47
SMAD1-207ENST00000507594 RTL1A6NKG5 1358 aa12.14□□□□□ -0.47
SMAD1-207ENST00000507594 ARHGEF25Q86VW2 580 aa12.13□□□□□ -0.47
SMAD1-207ENST00000507594 POLKQ9UBT6 870 aa12.13□□□□□ -0.47
SMAD1-207ENST00000507594 CPDO75976 1380 aa12.13□□□□□ -0.47
SMAD1-207ENST00000507594 HOXC9P31274 260 aa12.12□□□□□ -0.47
SMAD1-207ENST00000507594 BTG4Q9NY30 223 aa12.12□□□□□ -0.47
SMAD1-207ENST00000507594 CDK12Q9NYV4 1490 aaPredicted RBP12.12□□□□□ -0.47
SMAD1-207ENST00000507594 RGPD5Q99666 1765 aa12.12□□□□□ -0.47
SMAD1-207ENST00000507594 PEAK1Q9H792 1746 aa12.11□□□□□ -0.47
SMAD1-207ENST00000507594 FAM83GA6ND36 823 aa12.11□□□□□ -0.47
SMAD1-207ENST00000507594 IP6K1Q92551 441 aa12.11□□□□□ -0.47
SMAD1-207ENST00000507594 MRS2Q9HD23 443 aa12.11□□□□□ -0.47
SMAD1-207ENST00000507594 BLMP54132 1417 aaPredicted RBP12.11□□□□□ -0.47
SMAD1-207ENST00000507594 U2SURPO15042 1029 aaKnown RBP12.1□□□□□ -0.47
SMAD1-207ENST00000507594 WDR43Q15061 677 aaKnown RBP eCLIP12.1□□□□□ -0.47
SMAD1-207ENST00000507594 HSP90AB2PQ58FF8 381 aa12.1□□□□□ -0.47
SMAD1-207ENST00000507594 TOM1L2Q6ZVM7 507 aa12.1□□□□□ -0.47
SMAD1-207ENST00000507594 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
SMAD1-207ENST00000507594 ABCC6O95255 1503 aa12.1□□□□□ -0.47
SMAD1-207ENST00000507594 AFF2P51816 1311 aa12.1□□□□□ -0.47
SMAD1-207ENST00000507594 KIF24Q5T7B8 1368 aa12.09□□□□□ -0.47
SMAD1-207ENST00000507594 DIAPH1O60610 1272 aaKnown RBP12.09□□□□□ -0.47
SMAD1-207ENST00000507594 MIER1Q8N108 512 aa12.09□□□□□ -0.47
SMAD1-207ENST00000507594 NLRP2Q9NX02 1062 aa12.09□□□□□ -0.47
SMAD1-207ENST00000507594 USP21Q9UK80 565 aa12.09□□□□□ -0.47
SMAD1-207ENST00000507594 NUDCQ9Y266 331 aa12.09□□□□□ -0.47
SMAD1-207ENST00000507594 NWD2Q9ULI1 1742 aa12.08□□□□□ -0.47
SMAD1-207ENST00000507594 LMO7Q8WWI1 1683 aa12.08□□□□□ -0.48
SMAD1-207ENST00000507594 A0A0G2JS52 829 aa12.08□□□□□ -0.48
SMAD1-207ENST00000507594 MYT1Q01538 1121 aa12.08□□□□□ -0.48
SMAD1-207ENST00000507594 USP35Q9P2H5 1018 aa12.08□□□□□ -0.48
SMAD1-207ENST00000507594 INSRP06213 1382 aa12.07□□□□□ -0.48
SMAD1-207ENST00000507594 FAM208AQ9UK61 1670 aaKnown RBP12.07□□□□□ -0.48
SMAD1-207ENST00000507594 AXIN2Q9Y2T1 843 aa12.07□□□□□ -0.48
SMAD1-207ENST00000507594 COL18A1P39060 1754 aa12.07□□□□□ -0.48
SMAD1-207ENST00000507594 COL5A2P05997 1499 aaPredicted RBP12.07□□□□□ -0.48
SMAD1-207ENST00000507594 CAMTA1Q9Y6Y1 1673 aa12.06□□□□□ -0.48
SMAD1-207ENST00000507594 NRAPQ86VF7 1730 aa12.06□□□□□ -0.48
SMAD1-207ENST00000507594 EIF4A2Q14240 407 aaKnown RBP12.06□□□□□ -0.48
SMAD1-207ENST00000507594 USHBP1Q8N6Y0 703 aa12.06□□□□□ -0.48
SMAD1-207ENST00000507594 ERBB3P21860 1342 aa12.06□□□□□ -0.48
SMAD1-207ENST00000507594 U2AF1L5P0DN76 240 aaPredicted RBP12.05□□□□□ -0.48
SMAD1-207ENST00000507594 U2AF1Q01081 240 aaKnown RBP eCLIP12.05□□□□□ -0.48
SMAD1-207ENST00000507594 LARP1Q6PKG0 1096 aaKnown RBP12.05□□□□□ -0.48
SMAD1-207ENST00000507594 UNC5CLQ8IV45 518 aa12.05□□□□□ -0.48
SMAD1-207ENST00000507594 SLIT2O94813 1529 aa12.05□□□□□ -0.48
SMAD1-207ENST00000507594 WDR17Q8IZU2 1322 aa12.05□□□□□ -0.48
SMAD1-207ENST00000507594 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
SMAD1-207ENST00000507594 NEFMP07197 916 aa12.04□□□□□ -0.48
SMAD1-207ENST00000507594 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
SMAD1-207ENST00000507594 CRB1P82279 1406 aa12.03□□□□□ -0.48
SMAD1-207ENST00000507594 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.03□□□□□ -0.48
SMAD1-207ENST00000507594 COL3A1P02461 1466 aaPredicted RBP12.03□□□□□ -0.48
SMAD1-207ENST00000507594 CCER2I3L3R5 266 aa12.03□□□□□ -0.48
SMAD1-207ENST00000507594 HMOX1P09601 288 aa12.03□□□□□ -0.48
SMAD1-207ENST00000507594 FAM9BQ8IZU0 186 aa12.03□□□□□ -0.48
SMAD1-207ENST00000507594 TRPC5Q9UL62 973 aaPredicted RBP12.03□□□□□ -0.48
SMAD1-207ENST00000507594 IL13P35225 146 aa12.02□□□□□ -0.49
SMAD1-207ENST00000507594 SULT6B1Q6IMI4 303 aa12.02□□□□□ -0.49
SMAD1-207ENST00000507594 RAPGEF4Q8WZA2 1011 aa12.02□□□□□ -0.49
SMAD1-207ENST00000507594 CCDC184Q52MB2 194 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms