RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 PPFIA3O75145 1194 aa7.04□□□□□ -1.28
HMGB3P15-201ENST00000507326 PDXDC2PQ6P474 469 aa7.04□□□□□ -1.28
HMGB3P15-201ENST00000507326 TSEN34Q9BSV6 310 aaKnown RBP7.04□□□□□ -1.28
HMGB3P15-201ENST00000507326 KDM4CQ9H3R0 1056 aa7.04□□□□□ -1.28
HMGB3P15-201ENST00000507326 FKBPLQ9UIM3 349 aa7.04□□□□□ -1.28
HMGB3P15-201ENST00000507326 DNMT3LQ9UJW3 386 aa7.04□□□□□ -1.28
HMGB3P15-201ENST00000507326 VSIG8P0DPA2 414 aa7.03□□□□□ -1.28
HMGB3P15-201ENST00000507326 CBLBQ13191 982 aa7.03□□□□□ -1.28
HMGB3P15-201ENST00000507326 NR6A1Q15406 480 aa7.03□□□□□ -1.28
HMGB3P15-201ENST00000507326 SH3D19Q5HYK7 790 aa7.03□□□□□ -1.28
HMGB3P15-201ENST00000507326 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
HMGB3P15-201ENST00000507326 SLC10A4Q96EP9 437 aa7.03□□□□□ -1.28
HMGB3P15-201ENST00000507326 FAM117AQ9C073 453 aa7.03□□□□□ -1.28
HMGB3P15-201ENST00000507326 AP1G2O75843 785 aa7.02□□□□□ -1.29
HMGB3P15-201ENST00000507326 ZBTB33Q86T24 672 aa7.02□□□□□ -1.29
HMGB3P15-201ENST00000507326 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
HMGB3P15-201ENST00000507326 FIGNL2A6NMB9 653 aa7.01□□□□□ -1.29
HMGB3P15-201ENST00000507326 DDRGK1Q96HY6 314 aa7.01□□□□□ -1.29
HMGB3P15-201ENST00000507326 KCTD15Q96SI1 283 aaPredicted RBP7.01□□□□□ -1.29
HMGB3P15-201ENST00000507326 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.01□□□□□ -1.29
HMGB3P15-201ENST00000507326 TTLL8A6PVC2 850 aa7□□□□□ -1.29
HMGB3P15-201ENST00000507326 PPP2R2DQ66LE6 453 aa7□□□□□ -1.29
HMGB3P15-201ENST00000507326 ZC3H4Q9UPT8 1303 aaKnown RBP7□□□□□ -1.29
HMGB3P15-201ENST00000507326 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.99□□□□□ -1.29
HMGB3P15-201ENST00000507326 INTS6LQ5JSJ4 861 aaKnown RBP6.99□□□□□ -1.29
HMGB3P15-201ENST00000507326 OCSTAMPQ9BR26 566 aa6.99□□□□□ -1.29
HMGB3P15-201ENST00000507326 CDV3Q9UKY7 258 aaKnown RBP6.99□□□□□ -1.29
HMGB3P15-201ENST00000507326 PTK2Q05397 1052 aa6.98□□□□□ -1.29
HMGB3P15-201ENST00000507326 Q6ZVU0 165 aa6.98□□□□□ -1.29
HMGB3P15-201ENST00000507326 ADAM32Q8TC27 787 aa6.98□□□□□ -1.29
HMGB3P15-201ENST00000507326 EPS8L1Q8TE68 723 aa6.98□□□□□ -1.29
HMGB3P15-201ENST00000507326 AGBL1Q96MI9 1066 aa6.98□□□□□ -1.29
HMGB3P15-201ENST00000507326 SPINT1O43278 529 aa6.97□□□□□ -1.29
HMGB3P15-201ENST00000507326 RELBQ01201 579 aa6.97□□□□□ -1.29
HMGB3P15-201ENST00000507326 PTSQ03393 145 aa6.97□□□□□ -1.29
HMGB3P15-201ENST00000507326 DHX9Q08211 1270 aaKnown RBP6.97□□□□□ -1.29
HMGB3P15-201ENST00000507326 USP17L8P0C7I0 530 aa6.96□□□□□ -1.3
HMGB3P15-201ENST00000507326 RAB15P59190 212 aa6.96□□□□□ -1.3
HMGB3P15-201ENST00000507326 GPR161Q8N6U8 529 aaKnown RBP6.96□□□□□ -1.3
HMGB3P15-201ENST00000507326 HMX1Q9NP08 348 aaPredicted RBP6.96□□□□□ -1.3
HMGB3P15-201ENST00000507326 TMPRSS4Q9NRS4 437 aa6.95□□□□□ -1.3
HMGB3P15-201ENST00000507326 GPSM3Q9Y4H4 160 aa6.95□□□□□ -1.3
HMGB3P15-201ENST00000507326 CTSOP43234 321 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P15-201ENST00000507326 KRT76Q01546 638 aa6.94□□□□□ -1.3
HMGB3P15-201ENST00000507326 CCDC155Q8N6L0 562 aa6.94□□□□□ -1.3
HMGB3P15-201ENST00000507326 PNMA1Q8ND90 353 aa6.94□□□□□ -1.3
HMGB3P15-201ENST00000507326 CNTNAP3BQ96NU0 1288 aa6.94□□□□□ -1.3
HMGB3P15-201ENST00000507326 INSM2Q96T92 566 aaPredicted RBP6.94□□□□□ -1.3
HMGB3P15-201ENST00000507326 CNTNAP3Q9BZ76 1288 aa6.94□□□□□ -1.3
HMGB3P15-201ENST00000507326 RFC5P40937 340 aa6.93□□□□□ -1.3
HMGB3P15-201ENST00000507326 NBPF20Q3BBV1 942 aa6.93□□□□□ -1.3
HMGB3P15-201ENST00000507326 DZIP3Q86Y13 1208 aaKnown RBP6.93□□□□□ -1.3
HMGB3P15-201ENST00000507326 ZNF784Q8NCA9 323 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P15-201ENST00000507326 ZNF395Q9H8N7 513 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P15-201ENST00000507326 POLMQ9NP87 494 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P15-201ENST00000507326 SLC35F4A4IF30 521 aa6.92□□□□□ -1.3
HMGB3P15-201ENST00000507326 BCANQ96GW7 911 aa6.92□□□□□ -1.3
HMGB3P15-201ENST00000507326 ERVH48-1M5A8F1 160 aa6.91□□□□□ -1.3
HMGB3P15-201ENST00000507326 COL25A1Q9BXS0 654 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P15-201ENST00000507326 CDC14CA4D256 554 aa6.9□□□□□ -1.3
HMGB3P15-201ENST00000507326 ADH1AP07327 375 aa6.9□□□□□ -1.3
HMGB3P15-201ENST00000507326 ADD1P35611 737 aaKnown RBP6.9□□□□□ -1.3
HMGB3P15-201ENST00000507326 VWA5B2Q8N398 1253 aa6.9□□□□□ -1.3
HMGB3P15-201ENST00000507326 RNF217Q8TC41 542 aa6.9□□□□□ -1.3
HMGB3P15-201ENST00000507326 NANOS1Q8WY41 292 aaKnown RBP6.9□□□□□ -1.3
HMGB3P15-201ENST00000507326 LILRA1O75019 489 aa6.89□□□□□ -1.31
HMGB3P15-201ENST00000507326 ITGA6P23229 1130 aa6.89□□□□□ -1.31
HMGB3P15-201ENST00000507326 PCMTD1Q96MG8 357 aaPredicted RBP6.89□□□□□ -1.31
HMGB3P15-201ENST00000507326 TRIM34Q9BYJ4 488 aa6.89□□□□□ -1.31
HMGB3P15-201ENST00000507326 ESPNB1AK53 854 aa6.88□□□□□ -1.31
HMGB3P15-201ENST00000507326 PTGIRP43119 386 aa6.88□□□□□ -1.31
HMGB3P15-201ENST00000507326 RNFT1Q5M7Z0 435 aa6.88□□□□□ -1.31
HMGB3P15-201ENST00000507326 CYLDQ9NQC7 956 aa6.88□□□□□ -1.31
HMGB3P15-201ENST00000507326 FOXD4L5Q5VV16 416 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P15-201ENST00000507326 SV2AQ7L0J3 742 aa6.87□□□□□ -1.31
HMGB3P15-201ENST00000507326 KDF1Q8NAX2 398 aaPredicted RBP6.87□□□□□ -1.31
HMGB3P15-201ENST00000507326 SENP3-EIF4A1A0A087X0R7 540 aa6.86□□□□□ -1.31
HMGB3P15-201ENST00000507326 TMEM259Q4ZIN3 620 aa6.86□□□□□ -1.31
HMGB3P15-201ENST00000507326 PCDHB9Q9Y5E1 797 aa6.86□□□□□ -1.31
HMGB3P15-201ENST00000507326 KCNMA1Q12791 1236 aa6.85□□□□□ -1.31
HMGB3P15-201ENST00000507326 ADAMTS8Q9UP79 889 aa6.85□□□□□ -1.31
HMGB3P15-201ENST00000507326 ZBBXA8MT70 800 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 GIGYF1O75420 1035 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 RHOQP17081 205 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 NEUROD2Q15784 382 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 ZNF385CQ66K41 422 aaPredicted RBP6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 LYSMD3Q7Z3D4 306 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 SEPT12Q8IYM1 358 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 SVOPQ8N4V2 548 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 IL27Q8NEV9 243 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 WHAMMQ8TF30 809 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 GOPCQ9HD26 462 aa6.84□□□□□ -1.31
HMGB3P15-201ENST00000507326 FBXO45P0C2W1 286 aa6.83□□□□□ -1.32
HMGB3P15-201ENST00000507326 GSK3AP49840 483 aa6.83□□□□□ -1.32
HMGB3P15-201ENST00000507326 PRICKLE2Q7Z3G6 844 aa6.83□□□□□ -1.32
HMGB3P15-201ENST00000507326 KCTD17Q8N5Z5 321 aa6.83□□□□□ -1.32
HMGB3P15-201ENST00000507326 GJD4Q96KN9 370 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P15-201ENST00000507326 CUEDC1Q9NWM3 386 aaPredicted RBP6.83□□□□□ -1.32
HMGB3P15-201ENST00000507326 ATP5J2-PTCD1G3V325 749 aa6.81□□□□□ -1.32
HMGB3P15-201ENST00000507326 MEN1O00255 615 aa6.81□□□□□ -1.32
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