RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 PANK3Q9H999 370 aa27.38■■□□□ 1.97
DDR1-259ENST00000507046 SPATA31A5Q5VU36 1347 aa27.38■■□□□ 1.97
DDR1-259ENST00000507046 SPATA31A7Q8IWB4 1347 aa27.38■■□□□ 1.97
DDR1-259ENST00000507046 CCDC7Q96M83 1385 aa27.35■■□□□ 1.97
DDR1-259ENST00000507046 SPATA31A1Q5TZJ5 1347 aa27.34■■□□□ 1.97
DDR1-259ENST00000507046 LARP1Q6PKG0 1096 aaKnown RBP27.33■■□□□ 1.97
DDR1-259ENST00000507046 ZEB1P37275 1124 aaPredicted RBP27.32■■□□□ 1.96
DDR1-259ENST00000507046 AXIN2Q9Y2T1 843 aa27.32■■□□□ 1.96
DDR1-259ENST00000507046 CRB1P82279 1406 aa27.32■■□□□ 1.96
DDR1-259ENST00000507046 A0A0G2JS52 829 aa27.31■■□□□ 1.96
DDR1-259ENST00000507046 MYT1Q01538 1121 aa27.31■■□□□ 1.96
DDR1-259ENST00000507046 FAM98CQ17RN3 349 aaKnown RBP27.31■■□□□ 1.96
DDR1-259ENST00000507046 RGPD5Q99666 1765 aa27.3■■□□□ 1.96
DDR1-259ENST00000507046 WASHC2AQ641Q2 1341 aa27.3■■□□□ 1.96
DDR1-259ENST00000507046 ONECUT3O60422 494 aaPredicted RBP27.29■■□□□ 1.96
DDR1-259ENST00000507046 SEPT12Q8IYM1 358 aa27.29■■□□□ 1.96
DDR1-259ENST00000507046 USP35Q9P2H5 1018 aa27.29■■□□□ 1.96
DDR1-259ENST00000507046 WDR17Q8IZU2 1322 aa27.29■■□□□ 1.96
DDR1-259ENST00000507046 ANKRD26Q9UPS8 1709 aa27.29■■□□□ 1.96
DDR1-259ENST00000507046 BLMP54132 1417 aaPredicted RBP27.28■■□□□ 1.96
DDR1-259ENST00000507046 NSD2O96028 1365 aa27.28■■□□□ 1.96
DDR1-259ENST00000507046 CSB-PGBD3P0DP91 1061 aa27.28■■□□□ 1.96
DDR1-259ENST00000507046 TOM1L2Q6ZVM7 507 aa27.28■■□□□ 1.96
DDR1-259ENST00000507046 MAP3K19Q56UN5 1328 aa27.27■■□□□ 1.96
DDR1-259ENST00000507046 TCP11L2Q8N4U5 519 aa27.27■■□□□ 1.96
DDR1-259ENST00000507046 KNSTRNQ9Y448 316 aa27.27■■□□□ 1.96
DDR1-259ENST00000507046 THSD7AQ9UPZ6 1657 aa27.27■■□□□ 1.96
DDR1-259ENST00000507046 RTL1A6NKG5 1358 aa27.26■■□□□ 1.95
DDR1-259ENST00000507046 THRAP3Q9Y2W1 955 aaKnown RBP27.26■■□□□ 1.95
DDR1-259ENST00000507046 AMPHP49418 695 aa27.25■■□□□ 1.95
DDR1-259ENST00000507046 IP6K1Q92551 441 aa27.25■■□□□ 1.95
DDR1-259ENST00000507046 ERBB3P21860 1342 aa27.24■■□□□ 1.95
DDR1-259ENST00000507046 BARGINQ6ZT62 677 aa27.24■■□□□ 1.95
DDR1-259ENST00000507046 FBLN1P23142 703 aa27.23■■□□□ 1.95
DDR1-259ENST00000507046 RRS1Q15050 365 aaKnown RBP27.23■■□□□ 1.95
DDR1-259ENST00000507046 BRWD3Q6RI45 1802 aa27.23■■□□□ 1.95
DDR1-259ENST00000507046 HOXC9P31274 260 aa27.21■■□□□ 1.95
DDR1-259ENST00000507046 ANKRD24Q8TF21 1146 aa27.21■■□□□ 1.95
DDR1-259ENST00000507046 KIF24Q5T7B8 1368 aa27.21■■□□□ 1.95
DDR1-259ENST00000507046 FAM208AQ9UK61 1670 aaKnown RBP27.2■■□□□ 1.94
DDR1-259ENST00000507046 KRT27Q7Z3Y8 459 aa27.19■■□□□ 1.94
DDR1-259ENST00000507046 CARD10Q9BWT7 1032 aa27.19■■□□□ 1.94
DDR1-259ENST00000507046 FLT4P35916 1363 aa27.18■■□□□ 1.94
DDR1-259ENST00000507046 WNK3Q9BYP7 1800 aa27.18■■□□□ 1.94
DDR1-259ENST00000507046 SMG6Q86US8 1419 aaKnown RBP27.16■■□□□ 1.94
DDR1-259ENST00000507046 NLRP2Q9NX02 1062 aa27.16■■□□□ 1.94
DDR1-259ENST00000507046 PEAK1Q9H792 1746 aa27.16■■□□□ 1.94
DDR1-259ENST00000507046 PARP4Q9UKK3 1724 aaKnown RBP27.16■■□□□ 1.94
DDR1-259ENST00000507046 LTV1Q96GA3 475 aaPredicted RBP27.15■■□□□ 1.94
DDR1-259ENST00000507046 AMER1Q5JTC6 1135 aaPredicted RBP27.14■■□□□ 1.94
DDR1-259ENST00000507046 MORC1Q86VD1 984 aa27.14■■□□□ 1.94
DDR1-259ENST00000507046 CDCA7Q9BWT1 371 aaPredicted RBP27.14■■□□□ 1.94
DDR1-259ENST00000507046 EMILIN1Q9Y6C2 1016 aa27.14■■□□□ 1.94
DDR1-259ENST00000507046 TNNT2P45379 298 aaPredicted RBP27.13■■□□□ 1.93
DDR1-259ENST00000507046 UPF1Q92900 1129 aaKnown RBP eCLIP27.13■■□□□ 1.93
DDR1-259ENST00000507046 INSRP06213 1382 aa27.12■■□□□ 1.93
DDR1-259ENST00000507046 PER1O15534 1290 aaPredicted RBP27.12■■□□□ 1.93
DDR1-259ENST00000507046 MAP2P11137 1827 aaKnown RBP27.11■■□□□ 1.93
DDR1-259ENST00000507046 PPM1GO15355 546 aaPredicted RBP27.11■■□□□ 1.93
DDR1-259ENST00000507046 LRRC37A3O60309 1634 aa27.11■■□□□ 1.93
DDR1-259ENST00000507046 PDE3BQ13370 1112 aa27.1■■□□□ 1.93
DDR1-259ENST00000507046 DISP2A7MBM2 1401 aa27.09■■□□□ 1.93
DDR1-259ENST00000507046 POLKQ9UBT6 870 aa27.09■■□□□ 1.93
DDR1-259ENST00000507046 HSP90AB2PQ58FF8 381 aa27.08■■□□□ 1.93
DDR1-259ENST00000507046 NPC1L1Q9UHC9 1359 aa27.08■■□□□ 1.93
DDR1-259ENST00000507046 DDB1Q16531 1140 aa27.07■■□□□ 1.92
DDR1-259ENST00000507046 CC2D1BQ5T0F9 858 aaKnown RBP27.06■■□□□ 1.92
DDR1-259ENST00000507046 IL2RBP14784 551 aa27.04■■□□□ 1.92
DDR1-259ENST00000507046 RGPD2P0DJD1 1756 aa27.03■■□□□ 1.92
DDR1-259ENST00000507046 TNS2Q63HR2 1409 aa27.02■■□□□ 1.92
DDR1-259ENST00000507046 CCDC125Q86Z20 511 aa27.02■■□□□ 1.92
DDR1-259ENST00000507046 FAM182BQ5T319 152 aa27.01■■□□□ 1.91
DDR1-259ENST00000507046 FAM196AQ6ZSG2 479 aa27■■□□□ 1.91
DDR1-259ENST00000507046 OVOS2A0A0G2JMS6 1433 aa26.99■■□□□ 1.91
DDR1-259ENST00000507046 EXOC5O00471 708 aa26.99■■□□□ 1.91
DDR1-259ENST00000507046 NBPF6Q5VWK0 638 aa26.99■■□□□ 1.91
DDR1-259ENST00000507046 NBPF4Q96M43 638 aa26.99■■□□□ 1.91
DDR1-259ENST00000507046 SF3B2Q13435 895 aaKnown RBP26.98■■□□□ 1.91
DDR1-259ENST00000507046 CNGB1Q14028 1251 aaPredicted RBP26.98■■□□□ 1.91
DDR1-259ENST00000507046 EP400Q96L91 3159 aa26.98■■□□□ 1.91
DDR1-259ENST00000507046 USHBP1Q8N6Y0 703 aa26.96■■□□□ 1.91
DDR1-259ENST00000507046 RGPD1P0DJD0 1748 aa26.96■■□□□ 1.91
DDR1-259ENST00000507046 EIF4A2Q14240 407 aaKnown RBP26.93■■□□□ 1.9
DDR1-259ENST00000507046 RAPGEF4Q8WZA2 1011 aa26.93■■□□□ 1.9
DDR1-259ENST00000507046 MEGF6O75095 1541 aa26.93■■□□□ 1.9
DDR1-259ENST00000507046 NCAPD2Q15021 1401 aa26.91■■□□□ 1.9
DDR1-259ENST00000507046 MARCH10Q8NA82 808 aaPredicted RBP26.91■■□□□ 1.9
DDR1-259ENST00000507046 MTHFSP49914 203 aa26.9■■□□□ 1.9
DDR1-259ENST00000507046 EYA1Q99502 592 aa26.9■■□□□ 1.9
DDR1-259ENST00000507046 TATP17735 454 aaPredicted RBP26.89■■□□□ 1.9
DDR1-259ENST00000507046 BCL9O00512 1426 aa26.89■■□□□ 1.89
DDR1-259ENST00000507046 TNS1Q9HBL0 1735 aaKnown RBP26.88■■□□□ 1.89
DDR1-259ENST00000507046 TRIM37O94972 964 aa26.88■■□□□ 1.89
DDR1-259ENST00000507046 BAG6P46379 1132 aa26.87■■□□□ 1.89
DDR1-259ENST00000507046 DDX10Q13206 875 aaKnown RBP26.87■■□□□ 1.89
DDR1-259ENST00000507046 ZCRB1Q8TBF4 217 aaKnown RBP26.86■■□□□ 1.89
DDR1-259ENST00000507046 IGSF1Q8N6C5 1336 aa26.85■■□□□ 1.89
DDR1-259ENST00000507046 SHANK3Q9BYB0 1731 aa26.84■■□□□ 1.89
DDR1-259ENST00000507046 SBF2Q86WG5 1849 aa26.83■■□□□ 1.89
DDR1-259ENST00000507046 DDX54Q8TDD1 881 aaKnown RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms