RNA–Protein interactions for RNA: ENST00000506971.1

CALCOCO2-208, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 3

Gene CALCOCO2, Length 519 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-208ENST00000506971 BMP2P12643 396 aa8.8□□□□□ -1
CALCOCO2-208ENST00000506971 MRPL14Q6P1L8 145 aaKnown RBP8.8□□□□□ -1
CALCOCO2-208ENST00000506971 TRIM47Q96LD4 638 aa8.8□□□□□ -1
CALCOCO2-208ENST00000506971 TRMT44Q8IYL2 757 aaKnown RBP8.79□□□□□ -1
CALCOCO2-208ENST00000506971 TRIM34Q9BYJ4 488 aa8.79□□□□□ -1
CALCOCO2-208ENST00000506971 SNRKQ9NRH2 765 aa8.79□□□□□ -1
CALCOCO2-208ENST00000506971 PCDHB9Q9Y5E1 797 aa8.79□□□□□ -1
CALCOCO2-208ENST00000506971 PGPEP1Q9NXJ5 209 aa8.78□□□□□ -1
CALCOCO2-208ENST00000506971 MAP4K5Q9Y4K4 846 aa8.78□□□□□ -1
CALCOCO2-208ENST00000506971 EMILIN1Q9Y6C2 1016 aa8.78□□□□□ -1
CALCOCO2-208ENST00000506971 PPP1R26Q5T8A7 1209 aaPredicted RBP8.77□□□□□ -1.01
CALCOCO2-208ENST00000506971 CDV3Q9UKY7 258 aaKnown RBP8.77□□□□□ -1.01
CALCOCO2-208ENST00000506971 GPSM3Q9Y4H4 160 aa8.77□□□□□ -1.01
CALCOCO2-208ENST00000506971 NBPF20Q3BBV1 942 aa8.76□□□□□ -1.01
CALCOCO2-208ENST00000506971 OCSTAMPQ9BR26 566 aa8.76□□□□□ -1.01
CALCOCO2-208ENST00000506971 SOBPA7XYQ1 873 aa8.75□□□□□ -1.01
CALCOCO2-208ENST00000506971 ZBBXA8MT70 800 aa8.75□□□□□ -1.01
CALCOCO2-208ENST00000506971 APBB1O00213 710 aa8.75□□□□□ -1.01
CALCOCO2-208ENST00000506971 MAN1A2O60476 641 aa8.75□□□□□ -1.01
CALCOCO2-208ENST00000506971 CBLBQ13191 982 aa8.75□□□□□ -1.01
CALCOCO2-208ENST00000506971 BANK1Q8NDB2 785 aa8.75□□□□□ -1.01
CALCOCO2-208ENST00000506971 KLF16Q9BXK1 252 aaPredicted RBP8.75□□□□□ -1.01
CALCOCO2-208ENST00000506971 DHX9Q08211 1270 aaKnown RBP8.74□□□□□ -1.01
CALCOCO2-208ENST00000506971 INTS6LQ5JSJ4 861 aaKnown RBP8.74□□□□□ -1.01
CALCOCO2-208ENST00000506971 GJD4Q96KN9 370 aaPredicted RBP8.74□□□□□ -1.01
CALCOCO2-208ENST00000506971 NDUFB9Q9Y6M9 179 aa8.74□□□□□ -1.01
CALCOCO2-208ENST00000506971 FBXO45P0C2W1 286 aa8.73□□□□□ -1.01
CALCOCO2-208ENST00000506971 VEGFBP49765 207 aa8.73□□□□□ -1.01
CALCOCO2-208ENST00000506971 LINC00528Q8N1L1 170 aa8.73□□□□□ -1.01
CALCOCO2-208ENST00000506971 MTMR14Q8NCE2 650 aa8.73□□□□□ -1.01
CALCOCO2-208ENST00000506971 PRM3Q9NNZ6 103 aa8.73□□□□□ -1.01
CALCOCO2-208ENST00000506971 TMPRSS4Q9NRS4 437 aa8.73□□□□□ -1.01
CALCOCO2-208ENST00000506971 WFS1O76024 890 aa8.72□□□□□ -1.01
CALCOCO2-208ENST00000506971 RELBQ01201 579 aa8.72□□□□□ -1.01
CALCOCO2-208ENST00000506971 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
CALCOCO2-208ENST00000506971 MEIOBQ8N635 442 aa8.71□□□□□ -1.02
CALCOCO2-208ENST00000506971 TSEN34Q9BSV6 310 aaKnown RBP8.71□□□□□ -1.02
CALCOCO2-208ENST00000506971 ZNF330Q9Y3S2 320 aaPredicted RBP8.71□□□□□ -1.02
CALCOCO2-208ENST00000506971 FIGNL2A6NMB9 653 aa8.7□□□□□ -1.02
CALCOCO2-208ENST00000506971 ESF1Q9H501 851 aaKnown RBP8.7□□□□□ -1.02
CALCOCO2-208ENST00000506971 ERVH48-1M5A8F1 160 aa8.69□□□□□ -1.02
CALCOCO2-208ENST00000506971 GIGYF1O75420 1035 aaPredicted RBP8.69□□□□□ -1.02
CALCOCO2-208ENST00000506971 TREML4Q6UXN2 200 aa8.69□□□□□ -1.02
CALCOCO2-208ENST00000506971 SLC16A10Q8TF71 515 aa8.69□□□□□ -1.02
CALCOCO2-208ENST00000506971 ZNF395Q9H8N7 513 aaPredicted RBP8.69□□□□□ -1.02
CALCOCO2-208ENST00000506971 CYLDQ9NQC7 956 aa8.69□□□□□ -1.02
CALCOCO2-208ENST00000506971 TBC1D2BQ9UPU7 963 aa8.69□□□□□ -1.02
CALCOCO2-208ENST00000506971 TERTO14746 1132 aaKnown RBP8.68□□□□□ -1.02
CALCOCO2-208ENST00000506971 ABL2P42684 1182 aa8.68□□□□□ -1.02
CALCOCO2-208ENST00000506971 NR1H3Q13133 447 aa8.68□□□□□ -1.02
CALCOCO2-208ENST00000506971 ZNF784Q8NCA9 323 aaPredicted RBP8.68□□□□□ -1.02
CALCOCO2-208ENST00000506971 POLMQ9NP87 494 aaPredicted RBP8.67□□□□□ -1.02
CALCOCO2-208ENST00000506971 GDPD2Q9HCC8 539 aa8.66□□□□□ -1.02
CALCOCO2-208ENST00000506971 NXF1Q9UBU9 619 aaKnown RBP8.66□□□□□ -1.02
CALCOCO2-208ENST00000506971 TTLL8A6PVC2 850 aa8.65□□□□□ -1.02
CALCOCO2-208ENST00000506971 INSM2Q96T92 566 aaPredicted RBP8.64□□□□□ -1.03
CALCOCO2-208ENST00000506971 NFX1Q12986 1120 aaKnown RBP8.63□□□□□ -1.03
CALCOCO2-208ENST00000506971 RNF20Q5VTR2 975 aa8.63□□□□□ -1.03
CALCOCO2-208ENST00000506971 Q6ZVU0 165 aa8.63□□□□□ -1.03
CALCOCO2-208ENST00000506971 ZNF592Q92610 1267 aa8.63□□□□□ -1.03
CALCOCO2-208ENST00000506971 PCDHB11Q9Y5F2 797 aa8.63□□□□□ -1.03
CALCOCO2-208ENST00000506971 ADD1P35611 737 aaKnown RBP8.62□□□□□ -1.03
CALCOCO2-208ENST00000506971 VAC14Q08AM6 782 aa8.62□□□□□ -1.03
CALCOCO2-208ENST00000506971 TRIM52Q96A61 297 aa8.62□□□□□ -1.03
CALCOCO2-208ENST00000506971 DNMT3LQ9UJW3 386 aa8.62□□□□□ -1.03
CALCOCO2-208ENST00000506971 SOS2Q07890 1332 aaPredicted RBP8.61□□□□□ -1.03
CALCOCO2-208ENST00000506971 ESPNB1AK53 854 aa8.61□□□□□ -1.03
CALCOCO2-208ENST00000506971 MEN1O00255 615 aa8.61□□□□□ -1.03
CALCOCO2-208ENST00000506971 ADH1AP07327 375 aa8.61□□□□□ -1.03
CALCOCO2-208ENST00000506971 CTSOP43234 321 aaPredicted RBP8.61□□□□□ -1.03
CALCOCO2-208ENST00000506971 EIF4G2P78344 907 aaKnown RBP eCLIP8.61□□□□□ -1.03
CALCOCO2-208ENST00000506971 SEPT12Q8IYM1 358 aa8.61□□□□□ -1.03
CALCOCO2-208ENST00000506971 MCCD1P59942 119 aaPredicted RBP8.6□□□□□ -1.03
CALCOCO2-208ENST00000506971 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.6□□□□□ -1.038e-9■■■■■ 30.7
CALCOCO2-208ENST00000506971 SPINT1O43278 529 aa8.59□□□□□ -1.03
CALCOCO2-208ENST00000506971 IRF7Q92985 503 aa8.59□□□□□ -1.03
CALCOCO2-208ENST00000506971 ATP5J2-PTCD1G3V325 749 aa8.58□□□□□ -1.04
CALCOCO2-208ENST00000506971 LILRA1O75019 489 aa8.58□□□□□ -1.04
CALCOCO2-208ENST00000506971 PTGIRP43119 386 aa8.58□□□□□ -1.04
CALCOCO2-208ENST00000506971 SOCS7O14512 581 aa8.57□□□□□ -1.04
CALCOCO2-208ENST00000506971 GPR37L1O60883 481 aa8.57□□□□□ -1.04
CALCOCO2-208ENST00000506971 MCM6Q14566 821 aa8.57□□□□□ -1.04
CALCOCO2-208ENST00000506971 SLFNL1Q499Z3 407 aa8.57□□□□□ -1.04
CALCOCO2-208ENST00000506971 CC2D2BQ6DHV5 1058 aa8.57□□□□□ -1.04
CALCOCO2-208ENST00000506971 NLRP3Q96P20 1036 aa8.57□□□□□ -1.04
CALCOCO2-208ENST00000506971 CEP126Q9P2H0 1117 aa8.57□□□□□ -1.04
CALCOCO2-208ENST00000506971 RAD21O60216 631 aa8.56□□□□□ -1.04
CALCOCO2-208ENST00000506971 PTSQ03393 145 aa8.56□□□□□ -1.04
CALCOCO2-208ENST00000506971 SEMA3FQ13275 785 aa8.56□□□□□ -1.04
CALCOCO2-208ENST00000506971 PRICKLE2Q7Z3G6 844 aa8.56□□□□□ -1.04
CALCOCO2-208ENST00000506971 H3BM21 787 aa8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 PPFIA3O75145 1194 aa8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 MYCP01106 439 aaPredicted RBP8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 GMPRP36959 345 aa8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 SCTRP47872 440 aa8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 IRF5Q13568 498 aa8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 OXLD1Q5BKU9 147 aa8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 WWC1Q8IX03 1113 aa8.55□□□□□ -1.04
CALCOCO2-208ENST00000506971 RHOQP17081 205 aa8.54□□□□□ -1.04
CALCOCO2-208ENST00000506971 UBTFP17480 764 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms