RNA–Protein interactions for RNA: ENST00000506927.1

CLDND1-213, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 520 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-213ENST00000506927 PROCA1Q8NCQ7 364 aaPredicted RBP7.94□□□□□ -1.14
CLDND1-213ENST00000506927 TRIM52Q96A61 297 aa7.94□□□□□ -1.14
CLDND1-213ENST00000506927 NUTM2BA6NNL0 878 aaPredicted RBP7.93□□□□□ -1.14
CLDND1-213ENST00000506927 NUTM2EB1AL46 878 aaPredicted RBP7.93□□□□□ -1.14
CLDND1-213ENST00000506927 CFAP99D6REC4 459 aa7.93□□□□□ -1.14
CLDND1-213ENST00000506927 NUTM2DQ5VT03 806 aaPredicted RBP7.93□□□□□ -1.14
CLDND1-213ENST00000506927 NUTM2AQ8IVF1 878 aaPredicted RBP7.93□□□□□ -1.14
CLDND1-213ENST00000506927 KTN1Q86UP2 1357 aaKnown RBP7.93□□□□□ -1.14
CLDND1-213ENST00000506927 CNTLNQ9NXG0 1405 aa7.93□□□□□ -1.14
CLDND1-213ENST00000506927 RAD54L2Q9Y4B4 1467 aa7.93□□□□□ -1.14
CLDND1-213ENST00000506927 RTL5Q5HYW3 569 aaPredicted RBP7.92□□□□□ -1.14
CLDND1-213ENST00000506927 SPRYD7Q5W111 196 aa7.92□□□□□ -1.14
CLDND1-213ENST00000506927 CCDC24Q8N4L8 307 aa7.92□□□□□ -1.14
CLDND1-213ENST00000506927 ZBED9Q6R2W3 1325 aa7.92□□□□□ -1.14
CLDND1-213ENST00000506927 ROCK2O75116 1388 aaKnown RBP7.92□□□□□ -1.14
CLDND1-213ENST00000506927 DESI1Q6ICB0 168 aa7.91□□□□□ -1.14
CLDND1-213ENST00000506927 MPHOSPH9Q99550 1183 aa7.91□□□□□ -1.14
CLDND1-213ENST00000506927 NUDT12Q9BQG2 462 aa7.91□□□□□ -1.14
CLDND1-213ENST00000506927 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.91□□□□□ -1.14
CLDND1-213ENST00000506927 POLR1AO95602 1720 aaPredicted RBP7.9□□□□□ -1.14
CLDND1-213ENST00000506927 IQGAP2Q13576 1575 aa7.9□□□□□ -1.14
CLDND1-213ENST00000506927 FBXO31Q5XUX0 539 aaPredicted RBP7.9□□□□□ -1.14
CLDND1-213ENST00000506927 TSC1Q92574 1164 aa7.9□□□□□ -1.14
CLDND1-213ENST00000506927 ZBTB24O43167 697 aaPredicted RBP7.89□□□□□ -1.15
CLDND1-213ENST00000506927 HSPA5P11021 654 aaKnown RBP7.89□□□□□ -1.15
CLDND1-213ENST00000506927 RPIAP49247 311 aa7.89□□□□□ -1.15
CLDND1-213ENST00000506927 PTPRNQ16849 979 aa7.89□□□□□ -1.15
CLDND1-213ENST00000506927 ZNF598Q86UK7 904 aaKnown RBP7.89□□□□□ -1.15
CLDND1-213ENST00000506927 GOPCQ9HD26 462 aa7.89□□□□□ -1.15
CLDND1-213ENST00000506927 NESP48681 1621 aa7.89□□□□□ -1.15
CLDND1-213ENST00000506927 EPRSP07814 1512 aaKnown RBP7.88□□□□□ -1.15
CLDND1-213ENST00000506927 RPRD2Q5VT52 1461 aaKnown RBP7.88□□□□□ -1.15
CLDND1-213ENST00000506927 NCOA1Q15788 1441 aa7.88□□□□□ -1.15
CLDND1-213ENST00000506927 CCNYL3P0C7X3 344 aa7.88□□□□□ -1.15
CLDND1-213ENST00000506927 ZNF697Q5TEC3 545 aa7.88□□□□□ -1.15
CLDND1-213ENST00000506927 PTCRAQ6ISU1 281 aaPredicted RBP7.88□□□□□ -1.15
CLDND1-213ENST00000506927 LYPD8Q6UX82 237 aa7.88□□□□□ -1.15
CLDND1-213ENST00000506927 URB2Q14146 1524 aaKnown RBP7.88□□□□□ -1.15
CLDND1-213ENST00000506927 CCDC7Q96M83 1385 aa7.87□□□□□ -1.15
CLDND1-213ENST00000506927 PER1O15534 1290 aaPredicted RBP7.87□□□□□ -1.15
CLDND1-213ENST00000506927 CD2BP2O95400 341 aaKnown RBP7.87□□□□□ -1.15
CLDND1-213ENST00000506927 LAPTM4AQ15012 233 aa7.87□□□□□ -1.15
CLDND1-213ENST00000506927 PCMTD1Q96MG8 357 aaPredicted RBP7.87□□□□□ -1.15
CLDND1-213ENST00000506927 PRKRIP1Q9H875 184 aaPredicted RBP7.87□□□□□ -1.15
CLDND1-213ENST00000506927 MRS2Q9HD23 443 aa7.87□□□□□ -1.15
CLDND1-213ENST00000506927 EVA1BQ9NVM1 165 aa7.87□□□□□ -1.15
CLDND1-213ENST00000506927 ITSN2Q9NZM3 1697 aa7.86□□□□□ -1.15
CLDND1-213ENST00000506927 WASHC2AQ641Q2 1341 aa7.86□□□□□ -1.15
CLDND1-213ENST00000506927 PPP2R2DQ66LE6 453 aa7.86□□□□□ -1.15
CLDND1-213ENST00000506927 PTPRKQ15262 1439 aa7.86□□□□□ -1.15
CLDND1-213ENST00000506927 DNMT1P26358 1616 aaKnown RBP7.85□□□□□ -1.15
CLDND1-213ENST00000506927 KCNH2Q12809 1159 aa7.85□□□□□ -1.15
CLDND1-213ENST00000506927 TRIM32Q13049 653 aa7.85□□□□□ -1.15
CLDND1-213ENST00000506927 TRIM67Q6ZTA4 783 aa7.85□□□□□ -1.15
CLDND1-213ENST00000506927 HELBQ8NG08 1087 aaPredicted RBP7.85□□□□□ -1.15
CLDND1-213ENST00000506927 RRP7BPQ9NSQ0 103 aa7.85□□□□□ -1.15
CLDND1-213ENST00000506927 PBRM1Q86U86 1689 aa7.85□□□□□ -1.15
CLDND1-213ENST00000506927 DAPK1P53355 1430 aa7.85□□□□□ -1.15
CLDND1-213ENST00000506927 TDRD9Q8NDG6 1382 aaKnown RBP7.84□□□□□ -1.15
CLDND1-213ENST00000506927 ANKRD30BQ9BXX2 1392 aa7.84□□□□□ -1.15
CLDND1-213ENST00000506927 CTDSPL2Q05D32 466 aa7.84□□□□□ -1.15
CLDND1-213ENST00000506927 Q6ZNB5 142 aa7.84□□□□□ -1.15
CLDND1-213ENST00000506927 L3MBTL2Q969R5 705 aa7.84□□□□□ -1.15
CLDND1-213ENST00000506927 TARBP1Q13395 1621 aaKnown RBP7.84□□□□□ -1.15
CLDND1-213ENST00000506927 LRRIQ1Q96JM4 1722 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 WDR62O43379 1518 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 KIAA0586Q9BVV6 1533 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 ADGBQ8N7X0 1667 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 GFRA3O60609 400 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 CTHP32929 405 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 ANP32AP39687 249 aaKnown RBP7.83□□□□□ -1.16
CLDND1-213ENST00000506927 RALBP1Q15311 655 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 HIRIP3Q9BW71 556 aaPredicted RBP7.83□□□□□ -1.16
CLDND1-213ENST00000506927 MAP10Q9P2G4 905 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 PDZRN3Q9UPQ7 1066 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 SMG6Q86US8 1419 aaKnown RBP7.83□□□□□ -1.16
CLDND1-213ENST00000506927 ANKRD30AQ9BXX3 1397 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 KDM5BQ9UGL1 1544 aa7.83□□□□□ -1.16
CLDND1-213ENST00000506927 IFT140Q96RY7 1462 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 GDF9O60383 454 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 F12P00748 615 aaPredicted RBP7.82□□□□□ -1.16
CLDND1-213ENST00000506927 RFC5P40937 340 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 ADAMTS12P58397 1594 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 FOXC1Q12948 553 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 PDE3BQ13370 1112 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 UNC93B1Q9H1C4 597 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 PKD2L1Q9P0L9 805 aa7.82□□□□□ -1.16
CLDND1-213ENST00000506927 CARMIL2Q6F5E8 1435 aa7.81□□□□□ -1.16
CLDND1-213ENST00000506927 TNFRSF10AO00220 468 aa7.81□□□□□ -1.16
CLDND1-213ENST00000506927 AP1G2O75843 785 aa7.81□□□□□ -1.16
CLDND1-213ENST00000506927 CHIC2Q9UKJ5 165 aa7.81□□□□□ -1.16
CLDND1-213ENST00000506927 ADGRL2O95490 1459 aa7.81□□□□□ -1.16
CLDND1-213ENST00000506927 MRC2Q9UBG0 1479 aa7.81□□□□□ -1.16
CLDND1-213ENST00000506927 WASHC2CQ9Y4E1 1318 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 SPATA31E1Q6ZUB1 1445 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 KIAA1107Q9UPP5 1409 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 ARHGEF12Q9NZN5 1544 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 SKOR1P84550 965 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 PRR20EP86478 221 aa7.8□□□□□ -1.16
CLDND1-213ENST00000506927 PRR20CP86479 221 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms