RNA–Protein interactions for RNA: ENST00000506789.5

CDK7-205, Transcript of cyclin dependent kinase 7, humanhuman

TSL 5

Gene CDK7, Length 477 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-205ENST00000506789 ABCC6O95255 1503 aa17.49■□□□□ 0.39
CDK7-205ENST00000506789 VPS72Q15906 364 aa17.49■□□□□ 0.39
CDK7-205ENST00000506789 ARHGEF25Q86VW2 580 aa17.49■□□□□ 0.39
CDK7-205ENST00000506789 GGNBP2Q9H3C7 697 aa17.49■□□□□ 0.39
CDK7-205ENST00000506789 ZRANB1Q9UGI0 708 aa17.49■□□□□ 0.39
CDK7-205ENST00000506789 NFAT5O94916 1531 aa17.47■□□□□ 0.39
CDK7-205ENST00000506789 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
CDK7-205ENST00000506789 CDK12Q9NYV4 1490 aaPredicted RBP17.46■□□□□ 0.39
CDK7-205ENST00000506789 STRN4Q9NRL3 753 aa17.45■□□□□ 0.38
CDK7-205ENST00000506789 AMPHP49418 695 aa17.44■□□□□ 0.38
CDK7-205ENST00000506789 LMO7Q8WWI1 1683 aa17.44■□□□□ 0.38
CDK7-205ENST00000506789 NRAPQ86VF7 1730 aa17.44■□□□□ 0.38
CDK7-205ENST00000506789 RTL1A6NKG5 1358 aa17.42■□□□□ 0.38
CDK7-205ENST00000506789 KIF24Q5T7B8 1368 aa17.42■□□□□ 0.38
CDK7-205ENST00000506789 BLMP54132 1417 aaPredicted RBP17.42■□□□□ 0.38
CDK7-205ENST00000506789 CSB-PGBD3P0DP91 1061 aa17.42■□□□□ 0.38
CDK7-205ENST00000506789 COL5A2P05997 1499 aaPredicted RBP17.42■□□□□ 0.38
CDK7-205ENST00000506789 CAMTA1Q9Y6Y1 1673 aa17.42■□□□□ 0.38
CDK7-205ENST00000506789 MORC1Q86VD1 984 aa17.41■□□□□ 0.38
CDK7-205ENST00000506789 THRAP3Q9Y2W1 955 aaKnown RBP17.41■□□□□ 0.38
CDK7-205ENST00000506789 SPATA31A5Q5VU36 1347 aa17.41■□□□□ 0.38
CDK7-205ENST00000506789 SPATA31A7Q8IWB4 1347 aa17.41■□□□□ 0.38
CDK7-205ENST00000506789 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
CDK7-205ENST00000506789 LTN1O94822 1766 aa17.4■□□□□ 0.38
CDK7-205ENST00000506789 TOM1L2Q6ZVM7 507 aa17.4■□□□□ 0.38
CDK7-205ENST00000506789 IP6K1Q92551 441 aa17.4■□□□□ 0.38
CDK7-205ENST00000506789 WDR17Q8IZU2 1322 aa17.4■□□□□ 0.38
CDK7-205ENST00000506789 CRB1P82279 1406 aa17.39■□□□□ 0.38
CDK7-205ENST00000506789 A0A0G2JS52 829 aa17.39■□□□□ 0.37
CDK7-205ENST00000506789 MYT1Q01538 1121 aa17.39■□□□□ 0.37
CDK7-205ENST00000506789 MAP3K19Q56UN5 1328 aa17.39■□□□□ 0.37
CDK7-205ENST00000506789 SMG6Q86US8 1419 aaKnown RBP17.38■□□□□ 0.37
CDK7-205ENST00000506789 LARP1Q6PKG0 1096 aaKnown RBP17.38■□□□□ 0.37
CDK7-205ENST00000506789 TCP11L2Q8N4U5 519 aa17.38■□□□□ 0.37
CDK7-205ENST00000506789 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
CDK7-205ENST00000506789 SPATA31A1Q5TZJ5 1347 aa17.38■□□□□ 0.37
CDK7-205ENST00000506789 FLT4P35916 1363 aa17.38■□□□□ 0.37
CDK7-205ENST00000506789 NPC1L1Q9UHC9 1359 aa17.38■□□□□ 0.37
CDK7-205ENST00000506789 COL18A1P39060 1754 aa17.38■□□□□ 0.37
CDK7-205ENST00000506789 PER1O15534 1290 aaPredicted RBP17.37■□□□□ 0.37
CDK7-205ENST00000506789 RRS1Q15050 365 aaKnown RBP17.37■□□□□ 0.37
CDK7-205ENST00000506789 AMER1Q5JTC6 1135 aaPredicted RBP17.37■□□□□ 0.37
CDK7-205ENST00000506789 ERBB3P21860 1342 aa17.37■□□□□ 0.37
CDK7-205ENST00000506789 GLI3P10071 1580 aa17.36■□□□□ 0.37
CDK7-205ENST00000506789 HOXC9P31274 260 aa17.36■□□□□ 0.37
CDK7-205ENST00000506789 BARGINQ6ZT62 677 aa17.36■□□□□ 0.37
CDK7-205ENST00000506789 ANKRD24Q8TF21 1146 aa17.36■□□□□ 0.37
CDK7-205ENST00000506789 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
CDK7-205ENST00000506789 PPM1GO15355 546 aaPredicted RBP17.35■□□□□ 0.37
CDK7-205ENST00000506789 ONECUT3O60422 494 aaPredicted RBP17.35■□□□□ 0.37
CDK7-205ENST00000506789 TNNT2P45379 298 aaPredicted RBP17.35■□□□□ 0.37
CDK7-205ENST00000506789 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
CDK7-205ENST00000506789 CDCA7Q9BWT1 371 aaPredicted RBP17.35■□□□□ 0.37
CDK7-205ENST00000506789 CARD10Q9BWT7 1032 aa17.35■□□□□ 0.37
CDK7-205ENST00000506789 RGS12O14924 1447 aa17.35■□□□□ 0.37
CDK7-205ENST00000506789 FAM208AQ9UK61 1670 aaKnown RBP17.33■□□□□ 0.37
CDK7-205ENST00000506789 INSRP06213 1382 aa17.33■□□□□ 0.36
CDK7-205ENST00000506789 CC2D1BQ5T0F9 858 aaKnown RBP17.33■□□□□ 0.36
CDK7-205ENST00000506789 SEPT12Q8IYM1 358 aa17.33■□□□□ 0.36
CDK7-205ENST00000506789 UPF1Q92900 1129 aaKnown RBP eCLIP17.33■□□□□ 0.36
CDK7-205ENST00000506789 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.36
CDK7-205ENST00000506789 FBLN1P23142 703 aa17.32■□□□□ 0.36
CDK7-205ENST00000506789 RGPD5Q99666 1765 aa17.32■□□□□ 0.36
CDK7-205ENST00000506789 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
CDK7-205ENST00000506789 POLKQ9UBT6 870 aa17.31■□□□□ 0.36
CDK7-205ENST00000506789 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
CDK7-205ENST00000506789 MAP2P11137 1827 aaKnown RBP17.29■□□□□ 0.36
CDK7-205ENST00000506789 ZNF316A6NFI3 1004 aaPredicted RBP17.29■□□□□ 0.36
CDK7-205ENST00000506789 KRT27Q7Z3Y8 459 aa17.29■□□□□ 0.36
CDK7-205ENST00000506789 PDE3BQ13370 1112 aa17.28■□□□□ 0.36
CDK7-205ENST00000506789 HSP90AB2PQ58FF8 381 aa17.28■□□□□ 0.36
CDK7-205ENST00000506789 DDX10Q13206 875 aaKnown RBP17.27■□□□□ 0.36
CDK7-205ENST00000506789 THSD7AQ9UPZ6 1657 aa17.26■□□□□ 0.35
CDK7-205ENST00000506789 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
CDK7-205ENST00000506789 DDB1Q16531 1140 aa17.26■□□□□ 0.35
CDK7-205ENST00000506789 IL2RBP14784 551 aa17.25■□□□□ 0.35
CDK7-205ENST00000506789 PEAK1Q9H792 1746 aa17.24■□□□□ 0.35
CDK7-205ENST00000506789 EXOC5O00471 708 aa17.24■□□□□ 0.35
CDK7-205ENST00000506789 MTHFSP49914 203 aa17.23■□□□□ 0.35
CDK7-205ENST00000506789 RAPGEF4Q8WZA2 1011 aa17.23■□□□□ 0.35
CDK7-205ENST00000506789 CFAP53Q96M91 514 aa17.23■□□□□ 0.35
CDK7-205ENST00000506789 PARP4Q9UKK3 1724 aaKnown RBP17.23■□□□□ 0.35
CDK7-205ENST00000506789 CCDC125Q86Z20 511 aa17.22■□□□□ 0.35
CDK7-205ENST00000506789 WNK3Q9BYP7 1800 aa17.21■□□□□ 0.35
CDK7-205ENST00000506789 RALBP1Q15311 655 aa17.21■□□□□ 0.35
CDK7-205ENST00000506789 NBPF6Q5VWK0 638 aa17.21■□□□□ 0.35
CDK7-205ENST00000506789 FAM196AQ6ZSG2 479 aa17.21■□□□□ 0.35
CDK7-205ENST00000506789 NBPF4Q96M43 638 aa17.21■□□□□ 0.35
CDK7-205ENST00000506789 DISP2A7MBM2 1401 aa17.21■□□□□ 0.34
CDK7-205ENST00000506789 BRWD3Q6RI45 1802 aa17.2■□□□□ 0.34
CDK7-205ENST00000506789 TATP17735 454 aaPredicted RBP17.2■□□□□ 0.34
CDK7-205ENST00000506789 SF3B2Q13435 895 aaKnown RBP17.2■□□□□ 0.34
CDK7-205ENST00000506789 EIF4A2Q14240 407 aaKnown RBP17.2■□□□□ 0.34
CDK7-205ENST00000506789 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
CDK7-205ENST00000506789 DIAPH1O60610 1272 aaKnown RBP17.18■□□□□ 0.34
CDK7-205ENST00000506789 TNS2Q63HR2 1409 aa17.18■□□□□ 0.34
CDK7-205ENST00000506789 LRRC37A3O60309 1634 aa17.18■□□□□ 0.34
CDK7-205ENST00000506789 PLEKHG2Q9H7P9 1386 aa17.17■□□□□ 0.34
CDK7-205ENST00000506789 OVOS2A0A0G2JMS6 1433 aa17.17■□□□□ 0.34
CDK7-205ENST00000506789 EYA1Q99502 592 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms