RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 C4orf48Q5BLP8 95 aa7.93□□□□□ -1.14
SMAD1-205ENST00000506626 RTL5Q5HYW3 569 aaPredicted RBP7.93□□□□□ -1.14
SMAD1-205ENST00000506626 HELBQ8NG08 1087 aaPredicted RBP7.93□□□□□ -1.14
SMAD1-205ENST00000506626 PTSQ03393 145 aa7.92□□□□□ -1.14
SMAD1-205ENST00000506626 ARID5BQ14865 1188 aa7.92□□□□□ -1.14
SMAD1-205ENST00000506626 KANK3Q6NY19 840 aa7.92□□□□□ -1.14
SMAD1-205ENST00000506626 RSPH6AQ9H0K4 717 aa7.92□□□□□ -1.14
SMAD1-205ENST00000506626 AGERQ15109 404 aa7.91□□□□□ -1.14
SMAD1-205ENST00000506626 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.91□□□□□ -1.14
SMAD1-205ENST00000506626 BPHLQ86WA6 291 aaPredicted RBP7.91□□□□□ -1.14
SMAD1-205ENST00000506626 ARMC2Q8NEN0 867 aa7.91□□□□□ -1.14
SMAD1-205ENST00000506626 POLR3EQ9NVU0 708 aa7.9□□□□□ -1.14
SMAD1-205ENST00000506626 NBPF14Q5TI25 921 aa7.89□□□□□ -1.15
SMAD1-205ENST00000506626 C1QTNF2Q9BXJ5 285 aa7.89□□□□□ -1.15
SMAD1-205ENST00000506626 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
SMAD1-205ENST00000506626 TTLL8A6PVC2 850 aa7.88□□□□□ -1.15
SMAD1-205ENST00000506626 SH3RF1Q7Z6J0 888 aa7.88□□□□□ -1.15
SMAD1-205ENST00000506626 CCDC155Q8N6L0 562 aa7.88□□□□□ -1.15
SMAD1-205ENST00000506626 TSEN34Q9BSV6 310 aaKnown RBP7.88□□□□□ -1.15
SMAD1-205ENST00000506626 SH3BP5LQ7L8J4 393 aa7.87□□□□□ -1.15
SMAD1-205ENST00000506626 SLC35F4A4IF30 521 aa7.86□□□□□ -1.15
SMAD1-205ENST00000506626 ADAM23O75077 832 aa7.86□□□□□ -1.15
SMAD1-205ENST00000506626 FSHRP23945 695 aa7.85□□□□□ -1.15
SMAD1-205ENST00000506626 CTDSPL2Q05D32 466 aa7.85□□□□□ -1.15
SMAD1-205ENST00000506626 TRMT44Q8IYL2 757 aaKnown RBP7.85□□□□□ -1.15
SMAD1-205ENST00000506626 GPKOWQ92917 476 aaPredicted RBP eCLIP7.85□□□□□ -1.15
SMAD1-205ENST00000506626 SCARF2Q96GP6 870 aaPredicted RBP7.85□□□□□ -1.15
SMAD1-205ENST00000506626 GPBP1L1Q9HC44 474 aaPredicted RBP7.85□□□□□ -1.15
SMAD1-205ENST00000506626 MAP4K5Q9Y4K4 846 aa7.85□□□□□ -1.15
SMAD1-205ENST00000506626 MAGEB6P1A0A0J9YX57 407 aa7.84□□□□□ -1.15
SMAD1-205ENST00000506626 ITGB2P05107 769 aa7.84□□□□□ -1.15
SMAD1-205ENST00000506626 MARSP56192 900 aaKnown RBP7.84□□□□□ -1.15
SMAD1-205ENST00000506626 SKIV2LQ15477 1246 aaKnown RBP7.84□□□□□ -1.15
SMAD1-205ENST00000506626 SH3D19Q5HYK7 790 aa7.84□□□□□ -1.15
SMAD1-205ENST00000506626 KDM4CQ9H3R0 1056 aa7.84□□□□□ -1.15
SMAD1-205ENST00000506626 ITGA6P23229 1130 aa7.83□□□□□ -1.16
SMAD1-205ENST00000506626 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
SMAD1-205ENST00000506626 DDRGK1Q96HY6 314 aa7.83□□□□□ -1.16
SMAD1-205ENST00000506626 CARD14Q9BXL6 1004 aa7.83□□□□□ -1.16
SMAD1-205ENST00000506626 SPINT1O43278 529 aa7.82□□□□□ -1.16
SMAD1-205ENST00000506626 FBXO31Q5XUX0 539 aaPredicted RBP7.82□□□□□ -1.16
SMAD1-205ENST00000506626 LRRN4Q8WUT4 740 aa7.82□□□□□ -1.16
SMAD1-205ENST00000506626 FAM117AQ9C073 453 aa7.82□□□□□ -1.16
SMAD1-205ENST00000506626 EMILIN1Q9Y6C2 1016 aa7.82□□□□□ -1.16
SMAD1-205ENST00000506626 FIGNL2A6NMB9 653 aa7.81□□□□□ -1.16
SMAD1-205ENST00000506626 PLA2G4EQ3MJ16 856 aa7.81□□□□□ -1.16
SMAD1-205ENST00000506626 ERFEQ4G0M1 354 aa7.81□□□□□ -1.16
SMAD1-205ENST00000506626 LYPD4Q6UWN0 246 aa7.81□□□□□ -1.16
SMAD1-205ENST00000506626 Q6ZVU0 165 aa7.81□□□□□ -1.16
SMAD1-205ENST00000506626 VWA5B2Q8N398 1253 aa7.81□□□□□ -1.16
SMAD1-205ENST00000506626 PROCA1Q8NCQ7 364 aaPredicted RBP7.81□□□□□ -1.16
SMAD1-205ENST00000506626 SPOCK3Q9BQ16 436 aa7.81□□□□□ -1.16
SMAD1-205ENST00000506626 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.81□□□□□ -1.16
SMAD1-205ENST00000506626 ADAMTS2O95450 1211 aa7.8□□□□□ -1.16
SMAD1-205ENST00000506626 PPP2R2DQ66LE6 453 aa7.8□□□□□ -1.16
SMAD1-205ENST00000506626 CCDC116Q8IYX3 515 aa7.8□□□□□ -1.16
SMAD1-205ENST00000506626 BCANQ96GW7 911 aa7.8□□□□□ -1.16
SMAD1-205ENST00000506626 FKBPLQ9UIM3 349 aa7.8□□□□□ -1.16
SMAD1-205ENST00000506626 MSTNO14793 375 aa7.79□□□□□ -1.16
SMAD1-205ENST00000506626 PROCP04070 461 aa7.79□□□□□ -1.16
SMAD1-205ENST00000506626 PDXDC2PQ6P474 469 aa7.79□□□□□ -1.16
SMAD1-205ENST00000506626 SV2AQ7L0J3 742 aa7.79□□□□□ -1.16
SMAD1-205ENST00000506626 ZC3H4Q9UPT8 1303 aaKnown RBP7.78□□□□□ -1.16
SMAD1-205ENST00000506626 CDC14CA4D256 554 aa7.78□□□□□ -1.16
SMAD1-205ENST00000506626 SRSF11Q05519 484 aaKnown RBP7.78□□□□□ -1.16
SMAD1-205ENST00000506626 NR6A1Q15406 480 aa7.78□□□□□ -1.16
SMAD1-205ENST00000506626 ARHGAP9Q9BRR9 750 aa7.78□□□□□ -1.16
SMAD1-205ENST00000506626 SENP3-EIF4A1A0A087X0R7 540 aa7.77□□□□□ -1.17
SMAD1-205ENST00000506626 CBLBQ13191 982 aa7.77□□□□□ -1.17
SMAD1-205ENST00000506626 SLC10A4Q96EP9 437 aa7.77□□□□□ -1.17
SMAD1-205ENST00000506626 DCAF5Q96JK2 942 aa7.77□□□□□ -1.17
SMAD1-205ENST00000506626 ATP1B4Q9UN42 357 aaPredicted RBP7.77□□□□□ -1.17
SMAD1-205ENST00000506626 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.76□□□□□ -1.17
SMAD1-205ENST00000506626 CELA2BP08218 269 aaPredicted RBP7.76□□□□□ -1.17
SMAD1-205ENST00000506626 CDV3Q9UKY7 258 aaKnown RBP7.76□□□□□ -1.17
SMAD1-205ENST00000506626 AP1G2O75843 785 aa7.75□□□□□ -1.17
SMAD1-205ENST00000506626 GAS6Q14393 721 aa7.75□□□□□ -1.17
SMAD1-205ENST00000506626 PPP1R26Q5T8A7 1209 aaPredicted RBP7.75□□□□□ -1.17
SMAD1-205ENST00000506626 ZBTB33Q86T24 672 aa7.75□□□□□ -1.17
SMAD1-205ENST00000506626 KRTAP9-2Q9BYQ4 174 aa7.75□□□□□ -1.17
SMAD1-205ENST00000506626 CTSOP43234 321 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-205ENST00000506626 MAP3K10Q02779 954 aa7.74□□□□□ -1.17
SMAD1-205ENST00000506626 KCTD15Q96SI1 283 aaPredicted RBP7.74□□□□□ -1.17
SMAD1-205ENST00000506626 OCSTAMPQ9BR26 566 aa7.74□□□□□ -1.17
SMAD1-205ENST00000506626 PGPEP1Q9NXJ5 209 aa7.74□□□□□ -1.17
SMAD1-205ENST00000506626 USP17L8P0C7I0 530 aa7.73□□□□□ -1.17
SMAD1-205ENST00000506626 PTK2Q05397 1052 aa7.73□□□□□ -1.17
SMAD1-205ENST00000506626 GPSM3Q9Y4H4 160 aa7.73□□□□□ -1.17
SMAD1-205ENST00000506626 RNF217Q8TC41 542 aa7.72□□□□□ -1.17
SMAD1-205ENST00000506626 EPS8L1Q8TE68 723 aa7.72□□□□□ -1.17
SMAD1-205ENST00000506626 HMX1Q9NP08 348 aaPredicted RBP7.72□□□□□ -1.17
SMAD1-205ENST00000506626 CNTNAP5Q8WYK1 1306 aa7.72□□□□□ -1.17
SMAD1-205ENST00000506626 DHX9Q08211 1270 aaKnown RBP7.71□□□□□ -1.18
SMAD1-205ENST00000506626 INTS6LQ5JSJ4 861 aaKnown RBP7.71□□□□□ -1.18
SMAD1-205ENST00000506626 ADAM32Q8TC27 787 aa7.71□□□□□ -1.18
SMAD1-205ENST00000506626 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
SMAD1-205ENST00000506626 PHF20L1A8MW92 1017 aa7.7□□□□□ -1.18
SMAD1-205ENST00000506626 RFC5P40937 340 aa7.7□□□□□ -1.18
SMAD1-205ENST00000506626 PNMA1Q8ND90 353 aa7.7□□□□□ -1.18
SMAD1-205ENST00000506626 PSMG3-AS1Q96PY0 264 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms