RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 SPATA31A7Q8IWB4 1347 aa25.23■■□□□ 1.63
PDLIM7-216ENST00000506537 PANK3Q9H999 370 aa25.23■■□□□ 1.63
PDLIM7-216ENST00000506537 AXIN2Q9Y2T1 843 aa25.23■■□□□ 1.63
PDLIM7-216ENST00000506537 CCDC7Q96M83 1385 aa25.22■■□□□ 1.63
PDLIM7-216ENST00000506537 WASHC2AQ641Q2 1341 aa25.21■■□□□ 1.63
PDLIM7-216ENST00000506537 SPATA31A1Q5TZJ5 1347 aa25.19■■□□□ 1.62
PDLIM7-216ENST00000506537 FBLN1P23142 703 aa25.19■■□□□ 1.62
PDLIM7-216ENST00000506537 LARP1Q6PKG0 1096 aaKnown RBP25.19■■□□□ 1.62
PDLIM7-216ENST00000506537 ANKRD26Q9UPS8 1709 aa25.17■■□□□ 1.62
PDLIM7-216ENST00000506537 CGNL1Q0VF96 1302 aa25.17■■□□□ 1.62
PDLIM7-216ENST00000506537 THSD7AQ9UPZ6 1657 aa25.17■■□□□ 1.62
PDLIM7-216ENST00000506537 EVA1CP58658 441 aa25.17■■□□□ 1.62
PDLIM7-216ENST00000506537 BRWD3Q6RI45 1802 aa25.16■■□□□ 1.62
PDLIM7-216ENST00000506537 ONECUT3O60422 494 aaPredicted RBP25.16■■□□□ 1.62
PDLIM7-216ENST00000506537 FAM98CQ17RN3 349 aaKnown RBP25.15■■□□□ 1.62
PDLIM7-216ENST00000506537 MAP3K19Q56UN5 1328 aa25.14■■□□□ 1.62
PDLIM7-216ENST00000506537 CRB1P82279 1406 aa25.14■■□□□ 1.62
PDLIM7-216ENST00000506537 SEPT12Q8IYM1 358 aa25.14■■□□□ 1.62
PDLIM7-216ENST00000506537 WDR17Q8IZU2 1322 aa25.12■■□□□ 1.61
PDLIM7-216ENST00000506537 USP35Q9P2H5 1018 aa25.12■■□□□ 1.61
PDLIM7-216ENST00000506537 PEAK1Q9H792 1746 aa25.12■■□□□ 1.61
PDLIM7-216ENST00000506537 EP400Q96L91 3159 aa25.11■■□□□ 1.61
PDLIM7-216ENST00000506537 RRS1Q15050 365 aaKnown RBP25.11■■□□□ 1.61
PDLIM7-216ENST00000506537 BLMP54132 1417 aaPredicted RBP25.1■■□□□ 1.61
PDLIM7-216ENST00000506537 ERBB3P21860 1342 aa25.1■■□□□ 1.61
PDLIM7-216ENST00000506537 IP6K1Q92551 441 aa25.09■■□□□ 1.61
PDLIM7-216ENST00000506537 WNK3Q9BYP7 1800 aa25.09■■□□□ 1.61
PDLIM7-216ENST00000506537 RTL1A6NKG5 1358 aa25.08■■□□□ 1.61
PDLIM7-216ENST00000506537 BARGINQ6ZT62 677 aa25.08■■□□□ 1.61
PDLIM7-216ENST00000506537 TCP11L2Q8N4U5 519 aa25.08■■□□□ 1.61
PDLIM7-216ENST00000506537 UPF1Q92900 1129 aaKnown RBP eCLIP25.08■■□□□ 1.61
PDLIM7-216ENST00000506537 NSD2O96028 1365 aa25.07■■□□□ 1.6
PDLIM7-216ENST00000506537 HOXC9P31274 260 aa25.07■■□□□ 1.6
PDLIM7-216ENST00000506537 TOM1L2Q6ZVM7 507 aa25.07■■□□□ 1.6
PDLIM7-216ENST00000506537 A0A0G2JS52 829 aa25.06■■□□□ 1.6
PDLIM7-216ENST00000506537 MYT1Q01538 1121 aa25.06■■□□□ 1.6
PDLIM7-216ENST00000506537 ANKRD24Q8TF21 1146 aa25.06■■□□□ 1.6
PDLIM7-216ENST00000506537 KNSTRNQ9Y448 316 aa25.06■■□□□ 1.6
PDLIM7-216ENST00000506537 PER1O15534 1290 aaPredicted RBP25.05■■□□□ 1.6
PDLIM7-216ENST00000506537 CSB-PGBD3P0DP91 1061 aa25.05■■□□□ 1.6
PDLIM7-216ENST00000506537 AMER1Q5JTC6 1135 aaPredicted RBP25.05■■□□□ 1.6
PDLIM7-216ENST00000506537 THRAP3Q9Y2W1 955 aaKnown RBP25.05■■□□□ 1.6
PDLIM7-216ENST00000506537 PARP4Q9UKK3 1724 aaKnown RBP25.04■■□□□ 1.6
PDLIM7-216ENST00000506537 ZEB1P37275 1124 aaPredicted RBP25.04■■□□□ 1.6
PDLIM7-216ENST00000506537 AMPHP49418 695 aa25.04■■□□□ 1.6
PDLIM7-216ENST00000506537 CARD10Q9BWT7 1032 aa25.04■■□□□ 1.6
PDLIM7-216ENST00000506537 FAM208AQ9UK61 1670 aaKnown RBP25.04■■□□□ 1.6
PDLIM7-216ENST00000506537 EMILIN1Q9Y6C2 1016 aa25.03■■□□□ 1.6
PDLIM7-216ENST00000506537 MAP2P11137 1827 aaKnown RBP25.02■■□□□ 1.6
PDLIM7-216ENST00000506537 LRRC37A3O60309 1634 aa25.01■■□□□ 1.59
PDLIM7-216ENST00000506537 KRT27Q7Z3Y8 459 aa25.01■■□□□ 1.59
PDLIM7-216ENST00000506537 FLT4P35916 1363 aa25.01■■□□□ 1.59
PDLIM7-216ENST00000506537 KIF24Q5T7B8 1368 aa25.01■■□□□ 1.59
PDLIM7-216ENST00000506537 DISP2A7MBM2 1401 aa25.01■■□□□ 1.59
PDLIM7-216ENST00000506537 RGPD2P0DJD1 1756 aa25■■□□□ 1.59
PDLIM7-216ENST00000506537 LTV1Q96GA3 475 aaPredicted RBP25■■□□□ 1.59
PDLIM7-216ENST00000506537 TNNT2P45379 298 aaPredicted RBP24.99■■□□□ 1.59
PDLIM7-216ENST00000506537 NLRP2Q9NX02 1062 aa24.99■■□□□ 1.59
PDLIM7-216ENST00000506537 INSRP06213 1382 aa24.98■■□□□ 1.59
PDLIM7-216ENST00000506537 HSP90AB2PQ58FF8 381 aa24.98■■□□□ 1.59
PDLIM7-216ENST00000506537 POLKQ9UBT6 870 aa24.98■■□□□ 1.59
PDLIM7-216ENST00000506537 SMG6Q86US8 1419 aaKnown RBP24.96■■□□□ 1.59
PDLIM7-216ENST00000506537 MORC1Q86VD1 984 aa24.96■■□□□ 1.59
PDLIM7-216ENST00000506537 FAM182BQ5T319 152 aa24.95■■□□□ 1.58
PDLIM7-216ENST00000506537 NPC1L1Q9UHC9 1359 aa24.93■■□□□ 1.58
PDLIM7-216ENST00000506537 PPM1GO15355 546 aaPredicted RBP24.93■■□□□ 1.58
PDLIM7-216ENST00000506537 CC2D1BQ5T0F9 858 aaKnown RBP24.92■■□□□ 1.58
PDLIM7-216ENST00000506537 CDCA7Q9BWT1 371 aaPredicted RBP24.91■■□□□ 1.58
PDLIM7-216ENST00000506537 NBPF6Q5VWK0 638 aa24.9■■□□□ 1.58
PDLIM7-216ENST00000506537 NBPF4Q96M43 638 aa24.9■■□□□ 1.58
PDLIM7-216ENST00000506537 TNS2Q63HR2 1409 aa24.89■■□□□ 1.58
PDLIM7-216ENST00000506537 PDE3BQ13370 1112 aa24.88■■□□□ 1.57
PDLIM7-216ENST00000506537 DDB1Q16531 1140 aa24.88■■□□□ 1.57
PDLIM7-216ENST00000506537 IL2RBP14784 551 aa24.87■■□□□ 1.57
PDLIM7-216ENST00000506537 USHBP1Q8N6Y0 703 aa24.87■■□□□ 1.57
PDLIM7-216ENST00000506537 MEGF6O75095 1541 aa24.86■■□□□ 1.57
PDLIM7-216ENST00000506537 NCAPD2Q15021 1401 aa24.86■■□□□ 1.57
PDLIM7-216ENST00000506537 CNGB1Q14028 1251 aaPredicted RBP24.85■■□□□ 1.57
PDLIM7-216ENST00000506537 TNS1Q9HBL0 1735 aaKnown RBP24.83■■□□□ 1.57
PDLIM7-216ENST00000506537 EIF4A2Q14240 407 aaKnown RBP24.83■■□□□ 1.57
PDLIM7-216ENST00000506537 MARCH10Q8NA82 808 aaPredicted RBP24.83■■□□□ 1.57
PDLIM7-216ENST00000506537 OVOS2A0A0G2JMS6 1433 aa24.83■■□□□ 1.57
PDLIM7-216ENST00000506537 RGPD1P0DJD0 1748 aa24.83■■□□□ 1.57
PDLIM7-216ENST00000506537 SHANK3Q9BYB0 1731 aa24.83■■□□□ 1.57
PDLIM7-216ENST00000506537 FAM196AQ6ZSG2 479 aa24.82■■□□□ 1.56
PDLIM7-216ENST00000506537 EXOC5O00471 708 aa24.81■■□□□ 1.56
PDLIM7-216ENST00000506537 EYA1Q99502 592 aa24.8■■□□□ 1.56
PDLIM7-216ENST00000506537 CCDC125Q86Z20 511 aa24.79■■□□□ 1.56
PDLIM7-216ENST00000506537 SBF2Q86WG5 1849 aa24.79■■□□□ 1.56
PDLIM7-216ENST00000506537 MTHFSP49914 203 aa24.78■■□□□ 1.56
PDLIM7-216ENST00000506537 BCL9O00512 1426 aa24.78■■□□□ 1.56
PDLIM7-216ENST00000506537 DDX10Q13206 875 aaKnown RBP24.76■■□□□ 1.55
PDLIM7-216ENST00000506537 TRIM37O94972 964 aa24.75■■□□□ 1.55
PDLIM7-216ENST00000506537 IGSF1Q8N6C5 1336 aa24.75■■□□□ 1.55
PDLIM7-216ENST00000506537 COL3A1P02461 1466 aaPredicted RBP24.75■■□□□ 1.55
PDLIM7-216ENST00000506537 RAPGEF4Q8WZA2 1011 aa24.74■■□□□ 1.55
PDLIM7-216ENST00000506537 PKD1L3Q7Z443 1732 aa24.74■■□□□ 1.55
PDLIM7-216ENST00000506537 DEFB132Q7Z7B7 95 aa24.73■■□□□ 1.55
PDLIM7-216ENST00000506537 IL13P35225 146 aa24.72■■□□□ 1.55
PDLIM7-216ENST00000506537 TATP17735 454 aaPredicted RBP24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms