RNA–Protein interactions for RNA: ENST00000505944.5

NR1I3-221, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-221ENST00000505944 CDCA7Q9BWT1 371 aaPredicted RBP9.78□□□□□ -0.84
NR1I3-221ENST00000505944 USP35Q9P2H5 1018 aa9.78□□□□□ -0.84
NR1I3-221ENST00000505944 CCDC61Q9Y6R9 512 aa9.78□□□□□ -0.84
NR1I3-221ENST00000505944 BCL9O00512 1426 aa9.78□□□□□ -0.84
NR1I3-221ENST00000505944 KIAA1210Q9ULL0 1709 aa9.78□□□□□ -0.84
NR1I3-221ENST00000505944 CHRNA2Q15822 529 aa9.77□□□□□ -0.85
NR1I3-221ENST00000505944 NLRP13Q86W25 1043 aa9.77□□□□□ -0.85
NR1I3-221ENST00000505944 USP19O94966 1318 aa9.77□□□□□ -0.85
NR1I3-221ENST00000505944 WNK3Q9BYP7 1800 aa9.77□□□□□ -0.85
NR1I3-221ENST00000505944 CRB1P82279 1406 aa9.76□□□□□ -0.85
NR1I3-221ENST00000505944 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
NR1I3-221ENST00000505944 ZC3H6P61129 1189 aaKnown RBP9.76□□□□□ -0.85
NR1I3-221ENST00000505944 ABTB2Q8N961 1025 aa9.76□□□□□ -0.85
NR1I3-221ENST00000505944 BCL11BQ9C0K0 894 aaPredicted RBP9.76□□□□□ -0.85
NR1I3-221ENST00000505944 SBF2Q86WG5 1849 aa9.76□□□□□ -0.85
NR1I3-221ENST00000505944 CAMTA1Q9Y6Y1 1673 aa9.76□□□□□ -0.85
NR1I3-221ENST00000505944 COL5A2P05997 1499 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-221ENST00000505944 MKRN4PQ13434 485 aaPredicted RBP9.75□□□□□ -0.85
NR1I3-221ENST00000505944 LARP1Q6PKG0 1096 aaKnown RBP9.75□□□□□ -0.85
NR1I3-221ENST00000505944 RBM42Q9BTD8 480 aaKnown RBP9.75□□□□□ -0.85
NR1I3-221ENST00000505944 PEAK1Q9H792 1746 aa9.75□□□□□ -0.85
NR1I3-221ENST00000505944 AATKQ6ZMQ8 1374 aa9.75□□□□□ -0.85
NR1I3-221ENST00000505944 CHD4Q14839 1912 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 CASZ1Q86V15 1759 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 DDB1Q16531 1140 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 NBPF1Q3BBV0 1214 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 NUTM2GQ5VZR2 741 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 ZNF784Q8NCA9 323 aaPredicted RBP9.74□□□□□ -0.85
NR1I3-221ENST00000505944 UTRNP46939 3433 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 ACEP12821 1306 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 LRRC37A3O60309 1634 aa9.74□□□□□ -0.85
NR1I3-221ENST00000505944 GCP02774 474 aa9.73□□□□□ -0.85
NR1I3-221ENST00000505944 CDK19Q9BWU1 502 aa9.73□□□□□ -0.85
NR1I3-221ENST00000505944 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
NR1I3-221ENST00000505944 QRICH2Q9H0J4 1663 aa9.73□□□□□ -0.85
NR1I3-221ENST00000505944 MAP3K5Q99683 1374 aa9.73□□□□□ -0.85
NR1I3-221ENST00000505944 AKAP12Q02952 1782 aa9.73□□□□□ -0.85
NR1I3-221ENST00000505944 MTFR1LQ9H019 292 aa9.72□□□□□ -0.85
NR1I3-221ENST00000505944 C1QTNF8P60827 252 aa9.71□□□□□ -0.86
NR1I3-221ENST00000505944 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.86
NR1I3-221ENST00000505944 COL18A1P39060 1754 aa9.7□□□□□ -0.86
NR1I3-221ENST00000505944 SENP3-EIF4A1A0A087X0R7 540 aa9.7□□□□□ -0.86
NR1I3-221ENST00000505944 PTGER2P43116 358 aa9.7□□□□□ -0.86
NR1I3-221ENST00000505944 PPIP5K1Q6PFW1 1433 aa9.7□□□□□ -0.86
NR1I3-221ENST00000505944 SLIT3O75094 1523 aa9.7□□□□□ -0.86
NR1I3-221ENST00000505944 PIK3C2AO00443 1686 aa9.7□□□□□ -0.86
NR1I3-221ENST00000505944 RGPD5Q99666 1765 aa9.7□□□□□ -0.86
NR1I3-221ENST00000505944 ABCC6O95255 1503 aa9.69□□□□□ -0.86
NR1I3-221ENST00000505944 MYOM1P52179 1685 aa9.69□□□□□ -0.86
NR1I3-221ENST00000505944 SLC15A2Q16348 729 aa9.69□□□□□ -0.86
NR1I3-221ENST00000505944 TOM1L2Q6ZVM7 507 aa9.69□□□□□ -0.86
NR1I3-221ENST00000505944 WDR17Q8IZU2 1322 aa9.69□□□□□ -0.86
NR1I3-221ENST00000505944 SYT17Q9BSW7 474 aa9.69□□□□□ -0.86
NR1I3-221ENST00000505944 ZBTB7AO95365 584 aa9.68□□□□□ -0.86
NR1I3-221ENST00000505944 TXNRD1Q16881 649 aa9.68□□□□□ -0.86
NR1I3-221ENST00000505944 IFFO2Q5TF58 517 aa9.68□□□□□ -0.86
NR1I3-221ENST00000505944 POTEHQ6S545 545 aa9.68□□□□□ -0.86
NR1I3-221ENST00000505944 KCNH5Q8NCM2 988 aa9.68□□□□□ -0.86
NR1I3-221ENST00000505944 FHDC1Q9C0D6 1143 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-221ENST00000505944 ANO8Q9HCE9 1232 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-221ENST00000505944 ZBTB12Q9Y330 459 aaPredicted RBP9.68□□□□□ -0.86
NR1I3-221ENST00000505944 ROCK2O75116 1388 aaKnown RBP9.67□□□□□ -0.86
NR1I3-221ENST00000505944 CCDC7Q96M83 1385 aa9.67□□□□□ -0.86
NR1I3-221ENST00000505944 EXOC5O00471 708 aa9.67□□□□□ -0.86
NR1I3-221ENST00000505944 HMGB2P26583 209 aaKnown RBP9.67□□□□□ -0.86
NR1I3-221ENST00000505944 SRPK2P78362 688 aaKnown RBP9.67□□□□□ -0.86
NR1I3-221ENST00000505944 SLC16A10Q8TF71 515 aa9.67□□□□□ -0.86
NR1I3-221ENST00000505944 CARD10Q9BWT7 1032 aa9.67□□□□□ -0.86
NR1I3-221ENST00000505944 USP6P35125 1406 aa9.66□□□□□ -0.86
NR1I3-221ENST00000505944 NLRP6P59044 892 aa9.66□□□□□ -0.86
NR1I3-221ENST00000505944 ARXQ96QS3 562 aa9.66□□□□□ -0.86
NR1I3-221ENST00000505944 CPSF1Q10570 1443 aaKnown RBP9.65□□□□□ -0.86
NR1I3-221ENST00000505944 CENPJQ9HC77 1338 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-221ENST00000505944 TRPM1Q7Z4N2 1603 aa9.65□□□□□ -0.86
NR1I3-221ENST00000505944 ZBTB7CA1YPR0 619 aa9.65□□□□□ -0.86
NR1I3-221ENST00000505944 GIGYF1O75420 1035 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-221ENST00000505944 PROM2Q8N271 834 aa9.65□□□□□ -0.86
NR1I3-221ENST00000505944 MARCH10Q8NA82 808 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-221ENST00000505944 SGIP1Q9BQI5 828 aa9.65□□□□□ -0.86
NR1I3-221ENST00000505944 ZNF692Q9BU19 519 aaPredicted RBP9.65□□□□□ -0.86
NR1I3-221ENST00000505944 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
NR1I3-221ENST00000505944 TNS2Q63HR2 1409 aa9.65□□□□□ -0.87
NR1I3-221ENST00000505944 CSB-PGBD3P0DP91 1061 aa9.64□□□□□ -0.87
NR1I3-221ENST00000505944 CARD11Q9BXL7 1154 aa9.64□□□□□ -0.87
NR1I3-221ENST00000505944 NHSQ6T4R5 1651 aa9.64□□□□□ -0.87
NR1I3-221ENST00000505944 TTC21AQ8NDW8 1320 aa9.63□□□□□ -0.87
NR1I3-221ENST00000505944 POLD1P28340 1107 aa9.63□□□□□ -0.87
NR1I3-221ENST00000505944 FKBP8Q14318 412 aa9.63□□□□□ -0.87
NR1I3-221ENST00000505944 GPR162Q16538 588 aa9.63□□□□□ -0.87
NR1I3-221ENST00000505944 ARHGEF25Q86VW2 580 aa9.63□□□□□ -0.87
NR1I3-221ENST00000505944 MON2Q7Z3U7 1717 aa9.62□□□□□ -0.87
NR1I3-221ENST00000505944 GRIN3BO60391 1043 aa9.62□□□□□ -0.87
NR1I3-221ENST00000505944 SLC27A3Q5K4L6 730 aa9.62□□□□□ -0.87
NR1I3-221ENST00000505944 LTN1O94822 1766 aa9.62□□□□□ -0.87
NR1I3-221ENST00000505944 CEP350Q5VT06 3117 aa9.62□□□□□ -0.87
NR1I3-221ENST00000505944 QSER1Q2KHR3 1735 aa9.62□□□□□ -0.87
NR1I3-221ENST00000505944 NFAT5O94916 1531 aa9.61□□□□□ -0.87
NR1I3-221ENST00000505944 USP54Q70EL1 1684 aa9.61□□□□□ -0.87
NR1I3-221ENST00000505944 EVC2Q86UK5 1308 aa9.61□□□□□ -0.87
NR1I3-221ENST00000505944 PTF1AQ7RTS3 328 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms