RNA–Protein interactions for RNA: ENST00000505905.1

LIN54-205, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2

Gene LIN54, Length 810 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-205ENST00000505905 FAM117AQ9C073 453 aa12.84□□□□□ -0.35
LIN54-205ENST00000505905 OCSTAMPQ9BR26 566 aa12.83□□□□□ -0.36
LIN54-205ENST00000505905 FKBPLQ9UIM3 349 aa12.83□□□□□ -0.36
LIN54-205ENST00000505905 DNMT3LQ9UJW3 386 aa12.83□□□□□ -0.36
LIN54-205ENST00000505905 EMILIN1Q9Y6C2 1016 aa12.83□□□□□ -0.36
LIN54-205ENST00000505905 NR6A1Q15406 480 aa12.81□□□□□ -0.36
LIN54-205ENST00000505905 UPP2O95045 317 aa12.8□□□□□ -0.36
LIN54-205ENST00000505905 PPP1R26Q5T8A7 1209 aaPredicted RBP12.8□□□□□ -0.36
LIN54-205ENST00000505905 ARHGAP9Q9BRR9 750 aa12.8□□□□□ -0.36
LIN54-205ENST00000505905 TSEN34Q9BSV6 310 aaKnown RBP12.8□□□□□ -0.36
LIN54-205ENST00000505905 PPFIA3O75145 1194 aa12.79□□□□□ -0.36
LIN54-205ENST00000505905 Q6ZVU0 165 aa12.79□□□□□ -0.36
LIN54-205ENST00000505905 DDRGK1Q96HY6 314 aa12.78□□□□□ -0.36
LIN54-205ENST00000505905 ZC3H4Q9UPT8 1303 aaKnown RBP12.78□□□□□ -0.36
LIN54-205ENST00000505905 CBLBQ13191 982 aa12.76□□□□□ -0.37
LIN54-205ENST00000505905 KCTD15Q96SI1 283 aaPredicted RBP12.76□□□□□ -0.37
LIN54-205ENST00000505905 EPS8L1Q8TE68 723 aa12.75□□□□□ -0.37
LIN54-205ENST00000505905 FAM181BA6NEQ2 426 aa12.74□□□□□ -0.37
LIN54-205ENST00000505905 SLC10A4Q96EP9 437 aa12.74□□□□□ -0.37
LIN54-205ENST00000505905 TTLL8A6PVC2 850 aa12.73□□□□□ -0.37
LIN54-205ENST00000505905 HMX1Q9NP08 348 aaPredicted RBP12.73□□□□□ -0.37
LIN54-205ENST00000505905 PGPEP1Q9NXJ5 209 aa12.73□□□□□ -0.37
LIN54-205ENST00000505905 CDV3Q9UKY7 258 aaKnown RBP12.73□□□□□ -0.37
LIN54-205ENST00000505905 SPINT1O43278 529 aa12.72□□□□□ -0.37
LIN54-205ENST00000505905 AP1G2O75843 785 aa12.72□□□□□ -0.37
LIN54-205ENST00000505905 INTS6LQ5JSJ4 861 aaKnown RBP12.72□□□□□ -0.37
LIN54-205ENST00000505905 GPSM3Q9Y4H4 160 aa12.72□□□□□ -0.37
LIN54-205ENST00000505905 ZBTB33Q86T24 672 aa12.71□□□□□ -0.37
LIN54-205ENST00000505905 ADAM32Q8TC27 787 aa12.71□□□□□ -0.37
LIN54-205ENST00000505905 PTK2Q05397 1052 aa12.7□□□□□ -0.38
LIN54-205ENST00000505905 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.7□□□□□ -0.38
LIN54-205ENST00000505905 USP17L8P0C7I0 530 aa12.68□□□□□ -0.38
LIN54-205ENST00000505905 PTSQ03393 145 aa12.68□□□□□ -0.38
LIN54-205ENST00000505905 KRT76Q01546 638 aa12.67□□□□□ -0.38
LIN54-205ENST00000505905 DHX9Q08211 1270 aaKnown RBP12.67□□□□□ -0.38
LIN54-205ENST00000505905 GPR161Q8N6U8 529 aaKnown RBP12.67□□□□□ -0.38
LIN54-205ENST00000505905 AGBL1Q96MI9 1066 aa12.67□□□□□ -0.38
LIN54-205ENST00000505905 FIGNL2A6NMB9 653 aa12.66□□□□□ -0.38
LIN54-205ENST00000505905 RFC5P40937 340 aa12.64□□□□□ -0.39
LIN54-205ENST00000505905 CTSOP43234 321 aaPredicted RBP12.63□□□□□ -0.39
LIN54-205ENST00000505905 TRIM34Q9BYJ4 488 aa12.63□□□□□ -0.39
LIN54-205ENST00000505905 TMPRSS4Q9NRS4 437 aa12.63□□□□□ -0.39
LIN54-205ENST00000505905 SLC35F4A4IF30 521 aa12.61□□□□□ -0.39
LIN54-205ENST00000505905 ESPNB1AK53 854 aa12.61□□□□□ -0.39
LIN54-205ENST00000505905 LILRA1O75019 489 aa12.61□□□□□ -0.39
LIN54-205ENST00000505905 RELBQ01201 579 aa12.61□□□□□ -0.39
LIN54-205ENST00000505905 NBPF20Q3BBV1 942 aa12.61□□□□□ -0.39
LIN54-205ENST00000505905 CCDC155Q8N6L0 562 aa12.61□□□□□ -0.39
LIN54-205ENST00000505905 KDF1Q8NAX2 398 aaPredicted RBP12.61□□□□□ -0.39
LIN54-205ENST00000505905 ZNF784Q8NCA9 323 aaPredicted RBP12.61□□□□□ -0.39
LIN54-205ENST00000505905 NANOS1Q8WY41 292 aaKnown RBP12.61□□□□□ -0.39
LIN54-205ENST00000505905 BCANQ96GW7 911 aa12.61□□□□□ -0.39
LIN54-205ENST00000505905 INSM2Q96T92 566 aaPredicted RBP12.61□□□□□ -0.39
LIN54-205ENST00000505905 ATP1B4Q9UN42 357 aaPredicted RBP12.6□□□□□ -0.39
LIN54-205ENST00000505905 ADD1P35611 737 aaKnown RBP12.59□□□□□ -0.39
LIN54-205ENST00000505905 GOPCQ9HD26 462 aa12.59□□□□□ -0.39
LIN54-205ENST00000505905 ERVH48-1M5A8F1 160 aa12.58□□□□□ -0.4
LIN54-205ENST00000505905 RNF217Q8TC41 542 aa12.58□□□□□ -0.4
LIN54-205ENST00000505905 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
LIN54-205ENST00000505905 ADH1AP07327 375 aa12.56□□□□□ -0.4
LIN54-205ENST00000505905 PNMA1Q8ND90 353 aa12.56□□□□□ -0.4
LIN54-205ENST00000505905 ZNF395Q9H8N7 513 aaPredicted RBP12.56□□□□□ -0.4
LIN54-205ENST00000505905 GSK3AP49840 483 aa12.55□□□□□ -0.4
LIN54-205ENST00000505905 RAB15P59190 212 aa12.55□□□□□ -0.4
LIN54-205ENST00000505905 RNFT1Q5M7Z0 435 aa12.55□□□□□ -0.4
LIN54-205ENST00000505905 DZIP3Q86Y13 1208 aaKnown RBP12.55□□□□□ -0.4
LIN54-205ENST00000505905 CNTNAP3BQ96NU0 1288 aa12.55□□□□□ -0.4
LIN54-205ENST00000505905 COL25A1Q9BXS0 654 aaPredicted RBP12.55□□□□□ -0.4
LIN54-205ENST00000505905 CNTNAP3Q9BZ76 1288 aa12.55□□□□□ -0.4
LIN54-205ENST00000505905 ITGA6P23229 1130 aa12.54□□□□□ -0.4
LIN54-205ENST00000505905 FOXD4L5Q5VV16 416 aaPredicted RBP12.54□□□□□ -0.4
LIN54-205ENST00000505905 GJD4Q96KN9 370 aaPredicted RBP12.53□□□□□ -0.4
LIN54-205ENST00000505905 PTGIRP43119 386 aa12.52□□□□□ -0.41
LIN54-205ENST00000505905 POLMQ9NP87 494 aaPredicted RBP12.52□□□□□ -0.41
LIN54-205ENST00000505905 TMEM259Q4ZIN3 620 aa12.51□□□□□ -0.41
LIN54-205ENST00000505905 SEPT12Q8IYM1 358 aa12.5□□□□□ -0.41
LIN54-205ENST00000505905 VWA5B2Q8N398 1253 aa12.5□□□□□ -0.41
LIN54-205ENST00000505905 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
LIN54-205ENST00000505905 KCNMA1Q12791 1236 aa12.48□□□□□ -0.41
LIN54-205ENST00000505905 ZBBXA8MT70 800 aa12.47□□□□□ -0.41
LIN54-205ENST00000505905 FBXO45P0C2W1 286 aa12.47□□□□□ -0.41
LIN54-205ENST00000505905 CYLDQ9NQC7 956 aa12.47□□□□□ -0.41
LIN54-205ENST00000505905 GIGYF1O75420 1035 aaPredicted RBP12.46□□□□□ -0.41
LIN54-205ENST00000505905 SLURP2P0DP57 97 aa12.46□□□□□ -0.41
LIN54-205ENST00000505905 ZNF385CQ66K41 422 aaPredicted RBP12.46□□□□□ -0.41
LIN54-205ENST00000505905 GPR37L1O60883 481 aa12.45□□□□□ -0.42
LIN54-205ENST00000505905 CUEDC1Q9NWM3 386 aaPredicted RBP12.45□□□□□ -0.42
LIN54-205ENST00000505905 SV2AQ7L0J3 742 aa12.44□□□□□ -0.42
LIN54-205ENST00000505905 WHAMMQ8TF30 809 aa12.44□□□□□ -0.42
LIN54-205ENST00000505905 CDC14CA4D256 554 aa12.43□□□□□ -0.42
LIN54-205ENST00000505905 IL27Q8NEV9 243 aa12.43□□□□□ -0.42
LIN54-205ENST00000505905 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
LIN54-205ENST00000505905 RNF144AP50876 292 aaPredicted RBP12.42□□□□□ -0.42
LIN54-205ENST00000505905 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
LIN54-205ENST00000505905 LYSMD3Q7Z3D4 306 aa12.42□□□□□ -0.42
LIN54-205ENST00000505905 PCDHB9Q9Y5E1 797 aa12.42□□□□□ -0.42
LIN54-205ENST00000505905 ARHGEF15O94989 841 aa12.4□□□□□ -0.42
LIN54-205ENST00000505905 ERVK-9P63128 1117 aa12.39□□□□□ -0.43
LIN54-205ENST00000505905 GAS6Q14393 721 aa12.39□□□□□ -0.43
LIN54-205ENST00000505905 ATP5J2-PTCD1G3V325 749 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms