RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 EVA1CP58658 441 aa12.04□□□□□ -0.48
CTSB-205ENST00000505496 BARGINQ6ZT62 677 aa12.04□□□□□ -0.48
CTSB-205ENST00000505496 SEPT12Q8IYM1 358 aa12.04□□□□□ -0.48
CTSB-205ENST00000505496 STRN4Q9NRL3 753 aa12.04□□□□□ -0.48
CTSB-205ENST00000505496 THRAP3Q9Y2W1 955 aaKnown RBP12.04□□□□□ -0.48
CTSB-205ENST00000505496 CCDC9Q9Y3X0 531 aaKnown RBP12.04□□□□□ -0.48
CTSB-205ENST00000505496 CGNL1Q0VF96 1302 aa12.04□□□□□ -0.48
CTSB-205ENST00000505496 FAM98CQ17RN3 349 aaKnown RBP12.03□□□□□ -0.48
CTSB-205ENST00000505496 IP6K1Q92551 441 aa12.03□□□□□ -0.48
CTSB-205ENST00000505496 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
CTSB-205ENST00000505496 WASHC2AQ641Q2 1341 aa12.03□□□□□ -0.48
CTSB-205ENST00000505496 WDR17Q8IZU2 1322 aa12.03□□□□□ -0.48
CTSB-205ENST00000505496 CCDC7Q96M83 1385 aa12.03□□□□□ -0.48
CTSB-205ENST00000505496 CRB1P82279 1406 aa12.03□□□□□ -0.48
CTSB-205ENST00000505496 TCP11L2Q8N4U5 519 aa12.02□□□□□ -0.49
CTSB-205ENST00000505496 ERBB3P21860 1342 aa12.02□□□□□ -0.49
CTSB-205ENST00000505496 MAP3K19Q56UN5 1328 aa12.02□□□□□ -0.49
CTSB-205ENST00000505496 BLMP54132 1417 aaPredicted RBP12.02□□□□□ -0.49
CTSB-205ENST00000505496 THSD7AQ9UPZ6 1657 aa12.01□□□□□ -0.49
CTSB-205ENST00000505496 ZBTB7CA1YPR0 619 aa12.01□□□□□ -0.49
CTSB-205ENST00000505496 FBLN1P23142 703 aa12.01□□□□□ -0.49
CTSB-205ENST00000505496 CARD10Q9BWT7 1032 aa12.01□□□□□ -0.49
CTSB-205ENST00000505496 RTL1A6NKG5 1358 aa12.01□□□□□ -0.49
CTSB-205ENST00000505496 NSD2O96028 1365 aa12.01□□□□□ -0.49
CTSB-205ENST00000505496 KIF24Q5T7B8 1368 aa12.01□□□□□ -0.49
CTSB-205ENST00000505496 PER1O15534 1290 aaPredicted RBP12□□□□□ -0.49
CTSB-205ENST00000505496 HOXC9P31274 260 aa12□□□□□ -0.49
CTSB-205ENST00000505496 UPF1Q92900 1129 aaKnown RBP eCLIP12□□□□□ -0.49
CTSB-205ENST00000505496 RRS1Q15050 365 aaKnown RBP11.99□□□□□ -0.49
CTSB-205ENST00000505496 AMER1Q5JTC6 1135 aaPredicted RBP11.99□□□□□ -0.49
CTSB-205ENST00000505496 TOM1L2Q6ZVM7 507 aa11.99□□□□□ -0.49
CTSB-205ENST00000505496 KRT27Q7Z3Y8 459 aa11.99□□□□□ -0.49
CTSB-205ENST00000505496 ANKRD24Q8TF21 1146 aa11.98□□□□□ -0.49
CTSB-205ENST00000505496 USP35Q9P2H5 1018 aa11.98□□□□□ -0.49
CTSB-205ENST00000505496 KNSTRNQ9Y448 316 aa11.98□□□□□ -0.49
CTSB-205ENST00000505496 KIF20BQ96Q89 1820 aa11.97□□□□□ -0.49
CTSB-205ENST00000505496 DISP2A7MBM2 1401 aa11.97□□□□□ -0.49
CTSB-205ENST00000505496 AMPHP49418 695 aa11.97□□□□□ -0.49
CTSB-205ENST00000505496 CDCA7Q9BWT1 371 aaPredicted RBP11.97□□□□□ -0.49
CTSB-205ENST00000505496 INSRP06213 1382 aa11.96□□□□□ -0.49
CTSB-205ENST00000505496 FLT4P35916 1363 aa11.96□□□□□ -0.49
CTSB-205ENST00000505496 NPC1L1Q9UHC9 1359 aa11.96□□□□□ -0.49
CTSB-205ENST00000505496 CSB-PGBD3P0DP91 1061 aa11.96□□□□□ -0.49
CTSB-205ENST00000505496 LTN1O94822 1766 aa11.96□□□□□ -0.49
CTSB-205ENST00000505496 ZEB1P37275 1124 aaPredicted RBP11.95□□□□□ -0.5
CTSB-205ENST00000505496 POLKQ9UBT6 870 aa11.95□□□□□ -0.5
CTSB-205ENST00000505496 EMILIN1Q9Y6C2 1016 aa11.95□□□□□ -0.5
CTSB-205ENST00000505496 A0A0G2JS52 829 aa11.94□□□□□ -0.5
CTSB-205ENST00000505496 MYT1Q01538 1121 aa11.94□□□□□ -0.5
CTSB-205ENST00000505496 HSP90AB2PQ58FF8 381 aa11.94□□□□□ -0.5
CTSB-205ENST00000505496 CCDC125Q86Z20 511 aa11.94□□□□□ -0.5
CTSB-205ENST00000505496 NLRP2Q9NX02 1062 aa11.94□□□□□ -0.5
CTSB-205ENST00000505496 SMG6Q86US8 1419 aaKnown RBP11.94□□□□□ -0.5
CTSB-205ENST00000505496 BRWD3Q6RI45 1802 aa11.93□□□□□ -0.5
CTSB-205ENST00000505496 RGPD5Q99666 1765 aa11.93□□□□□ -0.5
CTSB-205ENST00000505496 PEAK1Q9H792 1746 aa11.93□□□□□ -0.5
CTSB-205ENST00000505496 PARP4Q9UKK3 1724 aaKnown RBP11.93□□□□□ -0.5
CTSB-205ENST00000505496 ANKRD26Q9UPS8 1709 aa11.92□□□□□ -0.5
CTSB-205ENST00000505496 MORC1Q86VD1 984 aa11.92□□□□□ -0.5
CTSB-205ENST00000505496 BCL9O00512 1426 aa11.92□□□□□ -0.5
CTSB-205ENST00000505496 IL2RBP14784 551 aa11.91□□□□□ -0.5
CTSB-205ENST00000505496 PDE3BQ13370 1112 aa11.91□□□□□ -0.5
CTSB-205ENST00000505496 DDB1Q16531 1140 aa11.91□□□□□ -0.5
CTSB-205ENST00000505496 NBPF6Q5VWK0 638 aa11.91□□□□□ -0.5
CTSB-205ENST00000505496 FAM196AQ6ZSG2 479 aa11.91□□□□□ -0.5
CTSB-205ENST00000505496 NBPF4Q96M43 638 aa11.91□□□□□ -0.5
CTSB-205ENST00000505496 NCAPD2Q15021 1401 aa11.91□□□□□ -0.5
CTSB-205ENST00000505496 TNNT2P45379 298 aaPredicted RBP11.9□□□□□ -0.5
CTSB-205ENST00000505496 FAM182BQ5T319 152 aa11.9□□□□□ -0.5
CTSB-205ENST00000505496 LTV1Q96GA3 475 aaPredicted RBP11.9□□□□□ -0.5
CTSB-205ENST00000505496 FAM208AQ9UK61 1670 aaKnown RBP11.9□□□□□ -0.5
CTSB-205ENST00000505496 LRRC37A3O60309 1634 aa11.89□□□□□ -0.51
CTSB-205ENST00000505496 TNS2Q63HR2 1409 aa11.89□□□□□ -0.51
CTSB-205ENST00000505496 MARCH10Q8NA82 808 aaPredicted RBP11.89□□□□□ -0.51
CTSB-205ENST00000505496 OVOS2A0A0G2JMS6 1433 aa11.88□□□□□ -0.51
CTSB-205ENST00000505496 EXOC5O00471 708 aa11.88□□□□□ -0.51
CTSB-205ENST00000505496 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
CTSB-205ENST00000505496 WNK3Q9BYP7 1800 aa11.88□□□□□ -0.51
CTSB-205ENST00000505496 EIF4A2Q14240 407 aaKnown RBP11.87□□□□□ -0.51
CTSB-205ENST00000505496 CC2D1BQ5T0F9 858 aaKnown RBP11.87□□□□□ -0.51
CTSB-205ENST00000505496 MEGF6O75095 1541 aa11.86□□□□□ -0.51
CTSB-205ENST00000505496 EYA1Q99502 592 aa11.86□□□□□ -0.51
CTSB-205ENST00000505496 PLEKHG2Q9H7P9 1386 aa11.85□□□□□ -0.51
CTSB-205ENST00000505496 USHBP1Q8N6Y0 703 aa11.85□□□□□ -0.51
CTSB-205ENST00000505496 MAP2P11137 1827 aaKnown RBP11.85□□□□□ -0.51
CTSB-205ENST00000505496 IGSF1Q8N6C5 1336 aa11.85□□□□□ -0.51
CTSB-205ENST00000505496 MTHFSP49914 203 aa11.84□□□□□ -0.51
CTSB-205ENST00000505496 TRIM37O94972 964 aa11.83□□□□□ -0.52
CTSB-205ENST00000505496 IL13P35225 146 aa11.83□□□□□ -0.52
CTSB-205ENST00000505496 SF3B2Q13435 895 aaKnown RBP11.83□□□□□ -0.52
CTSB-205ENST00000505496 ZCRB1Q8TBF4 217 aaKnown RBP11.83□□□□□ -0.52
CTSB-205ENST00000505496 RAPGEF4Q8WZA2 1011 aa11.83□□□□□ -0.52
CTSB-205ENST00000505496 TATP17735 454 aaPredicted RBP11.82□□□□□ -0.52
CTSB-205ENST00000505496 BAG6P46379 1132 aa11.82□□□□□ -0.52
CTSB-205ENST00000505496 DEFB132Q7Z7B7 95 aa11.82□□□□□ -0.52
CTSB-205ENST00000505496 BCL11BQ9C0K0 894 aaPredicted RBP11.82□□□□□ -0.52
CTSB-205ENST00000505496 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.82□□□□□ -0.52
CTSB-205ENST00000505496 KDRP35968 1356 aa11.81□□□□□ -0.52
CTSB-205ENST00000505496 CAMKK2Q96RR4 588 aa11.81□□□□□ -0.52
CTSB-205ENST00000505496 RGPD2P0DJD1 1756 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms