RNA–Protein interactions for RNA: ENST00000505479.1

SEC31A-216, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

TSL 2

Gene SEC31A, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-216ENST00000505479 GPSM3Q9Y4H4 160 aa8.53□□□□□ -1.04
SEC31A-216ENST00000505479 SYNJ2O15056 1496 aa8.52□□□□□ -1.05
SEC31A-216ENST00000505479 CHMP7Q8WUX9 453 aaPredicted RBP8.52□□□□□ -1.05
SEC31A-216ENST00000505479 PPP1R12CQ9BZL4 782 aa8.52□□□□□ -1.05
SEC31A-216ENST00000505479 ITGBL1O95965 494 aaPredicted RBP8.51□□□□□ -1.05
SEC31A-216ENST00000505479 KCNC4Q03721 635 aa8.51□□□□□ -1.05
SEC31A-216ENST00000505479 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
SEC31A-216ENST00000505479 OCSTAMPQ9BR26 566 aa8.51□□□□□ -1.05
SEC31A-216ENST00000505479 PALM3A6NDB9 673 aaPredicted RBP8.5□□□□□ -1.05
SEC31A-216ENST00000505479 RFX1P22670 979 aa8.5□□□□□ -1.05
SEC31A-216ENST00000505479 ARHGAP9Q9BRR9 750 aa8.5□□□□□ -1.05
SEC31A-216ENST00000505479 RIMBP3CA6NJZ7 1639 aa8.5□□□□□ -1.05
SEC31A-216ENST00000505479 RIMBP3BA6NNM3 1639 aa8.5□□□□□ -1.05
SEC31A-216ENST00000505479 RIMBP3Q9UFD9 1639 aa8.5□□□□□ -1.05
SEC31A-216ENST00000505479 ERICH3Q5RHP9 1530 aa8.49□□□□□ -1.05
SEC31A-216ENST00000505479 PPP1R15AO75807 674 aaPredicted RBP8.49□□□□□ -1.05
SEC31A-216ENST00000505479 LINC01559Q495D7 138 aa8.49□□□□□ -1.05
SEC31A-216ENST00000505479 SH3BP5LQ7L8J4 393 aa8.49□□□□□ -1.05
SEC31A-216ENST00000505479 ADAM32Q8TC27 787 aa8.48□□□□□ -1.05
SEC31A-216ENST00000505479 BAP1Q92560 729 aa8.48□□□□□ -1.05
SEC31A-216ENST00000505479 ZNF592Q92610 1267 aa8.48□□□□□ -1.05
SEC31A-216ENST00000505479 PBXIP1Q96AQ6 731 aa8.48□□□□□ -1.05
SEC31A-216ENST00000505479 TFIP11Q9UBB9 837 aaKnown RBP8.48□□□□□ -1.05
SEC31A-216ENST00000505479 PCDHB9Q9Y5E1 797 aa8.48□□□□□ -1.05
SEC31A-216ENST00000505479 ARHGEF11O15085 1522 aa8.48□□□□□ -1.05
SEC31A-216ENST00000505479 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.47□□□□□ -1.05
SEC31A-216ENST00000505479 PPEF1O14829 653 aaPredicted RBP8.47□□□□□ -1.05
SEC31A-216ENST00000505479 LMOD1P29536 600 aaPredicted RBP8.47□□□□□ -1.05
SEC31A-216ENST00000505479 TBC1D9Q6ZT07 1266 aa8.47□□□□□ -1.05
SEC31A-216ENST00000505479 ZBTB33Q86T24 672 aa8.47□□□□□ -1.05
SEC31A-216ENST00000505479 CARD14Q9BXL6 1004 aa8.47□□□□□ -1.05
SEC31A-216ENST00000505479 CLASP1Q7Z460 1538 aa8.46□□□□□ -1.05
SEC31A-216ENST00000505479 PIK3CDO00329 1044 aa8.46□□□□□ -1.06
SEC31A-216ENST00000505479 ATP9BO43861 1147 aa8.46□□□□□ -1.06
SEC31A-216ENST00000505479 ZNF511Q8NB15 262 aa8.46□□□□□ -1.06
SEC31A-216ENST00000505479 MAFBQ9Y5Q3 323 aaPredicted RBP8.46□□□□□ -1.06
SEC31A-216ENST00000505479 ADAMTS12P58397 1594 aa8.46□□□□□ -1.06
SEC31A-216ENST00000505479 FHAD1B1AJZ9 1412 aa8.46□□□□□ -1.06
SEC31A-216ENST00000505479 MAGEB6P1A0A0J9YX57 407 aa8.45□□□□□ -1.06
SEC31A-216ENST00000505479 RNF223E7ERA6 249 aa8.45□□□□□ -1.06
SEC31A-216ENST00000505479 PDIA4P13667 645 aaKnown RBP8.45□□□□□ -1.06
SEC31A-216ENST00000505479 GGCXP38435 758 aa8.45□□□□□ -1.06
SEC31A-216ENST00000505479 MCCD1P59942 119 aaPredicted RBP8.45□□□□□ -1.06
SEC31A-216ENST00000505479 SH3RF1Q7Z6J0 888 aa8.45□□□□□ -1.06
SEC31A-216ENST00000505479 RETREG2Q8NC44 543 aa8.45□□□□□ -1.06
SEC31A-216ENST00000505479 FOXJ1Q92949 421 aa8.45□□□□□ -1.06
SEC31A-216ENST00000505479 GRIN2AQ12879 1464 aa8.45□□□□□ -1.06
SEC31A-216ENST00000505479 AGERQ15109 404 aa8.44□□□□□ -1.06
SEC31A-216ENST00000505479 BPHLQ86WA6 291 aaPredicted RBP8.44□□□□□ -1.06
SEC31A-216ENST00000505479 ANKLE1Q8NAG6 615 aa8.44□□□□□ -1.06
SEC31A-216ENST00000505479 CEP126Q9P2H0 1117 aa8.44□□□□□ -1.06
SEC31A-216ENST00000505479 KIF27Q86VH2 1401 aa8.44□□□□□ -1.06
SEC31A-216ENST00000505479 CUL7Q14999 1698 aa8.43□□□□□ -1.06
SEC31A-216ENST00000505479 SKIP12755 728 aa8.43□□□□□ -1.06
SEC31A-216ENST00000505479 SRPK2P78362 688 aaKnown RBP8.43□□□□□ -1.06
SEC31A-216ENST00000505479 SLFNL1Q499Z3 407 aa8.43□□□□□ -1.06
SEC31A-216ENST00000505479 DZIP3Q86Y13 1208 aaKnown RBP8.43□□□□□ -1.06
SEC31A-216ENST00000505479 NFATC2IPQ8NCF5 419 aa8.43□□□□□ -1.06
SEC31A-216ENST00000505479 FAM174AQ8TBP5 190 aa8.43□□□□□ -1.06
SEC31A-216ENST00000505479 ZBTB24O43167 697 aaPredicted RBP8.42□□□□□ -1.06
SEC31A-216ENST00000505479 ERFEQ4G0M1 354 aa8.42□□□□□ -1.06
SEC31A-216ENST00000505479 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
SEC31A-216ENST00000505479 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
SEC31A-216ENST00000505479 ACIN1Q9UKV3 1341 aaKnown RBP8.42□□□□□ -1.06
SEC31A-216ENST00000505479 USP17L5A8MUK1 530 aa8.41□□□□□ -1.06
SEC31A-216ENST00000505479 SH3BP2P78314 561 aa8.41□□□□□ -1.06
SEC31A-216ENST00000505479 TRIM32Q13049 653 aa8.41□□□□□ -1.06
SEC31A-216ENST00000505479 RNF135Q8IUD6 432 aa8.41□□□□□ -1.06
SEC31A-216ENST00000505479 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.41□□□□□ -1.06
SEC31A-216ENST00000505479 USP17L3A6NCW0 530 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 USP17L4A6NCW7 530 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 CDCA8Q53HL2 280 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 PPP1R18Q6NYC8 613 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 USP17L2Q6R6M4 530 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 USP17L1Q7RTZ2 530 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 PHTF2Q8N3S3 785 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 SLC10A4Q96EP9 437 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 C1QTNF2Q9BXJ5 285 aa8.4□□□□□ -1.06
SEC31A-216ENST00000505479 NUP160Q12769 1436 aa8.39□□□□□ -1.07
SEC31A-216ENST00000505479 PLEKHM2Q8IWE5 1019 aa8.39□□□□□ -1.07
SEC31A-216ENST00000505479 TRAIPQ9BWF2 469 aa8.39□□□□□ -1.07
SEC31A-216ENST00000505479 CEP170Q5SW79 1584 aa8.39□□□□□ -1.07
SEC31A-216ENST00000505479 CYB5RLQ6IPT4 315 aa8.38□□□□□ -1.07
SEC31A-216ENST00000505479 DEPDC4Q8N2C3 294 aa8.38□□□□□ -1.07
SEC31A-216ENST00000505479 PLPP7Q8NBV4 271 aa8.38□□□□□ -1.07
SEC31A-216ENST00000505479 VRTNQ9H8Y1 702 aa8.38□□□□□ -1.07
SEC31A-216ENST00000505479 ARAP1Q96P48 1450 aa8.38□□□□□ -1.07
SEC31A-216ENST00000505479 SHROOM2Q13796 1616 aa8.37□□□□□ -1.07
SEC31A-216ENST00000505479 ATG7O95352 703 aa8.37□□□□□ -1.07
SEC31A-216ENST00000505479 WNT7BP56706 349 aa8.37□□□□□ -1.07
SEC31A-216ENST00000505479 SKOR1P84550 965 aa8.37□□□□□ -1.07
SEC31A-216ENST00000505479 TRMT44Q8IYL2 757 aaKnown RBP8.37□□□□□ -1.07
SEC31A-216ENST00000505479 CHIC2Q9UKJ5 165 aa8.37□□□□□ -1.07
SEC31A-216ENST00000505479 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
SEC31A-216ENST00000505479 CSB-PGBD3P0DP91 1061 aa8.36□□□□□ -1.07
SEC31A-216ENST00000505479 RPIAP49247 311 aa8.36□□□□□ -1.07
SEC31A-216ENST00000505479 NCOA4Q13772 614 aa8.36□□□□□ -1.07
SEC31A-216ENST00000505479 NBPF20Q3BBV1 942 aa8.36□□□□□ -1.07
SEC31A-216ENST00000505479 KANK4Q5T7N3 995 aaPredicted RBP8.36□□□□□ -1.07
SEC31A-216ENST00000505479 MAP7D1Q3KQU3 841 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms