RNA–Protein interactions for RNA: ENST00000505377.1

COL25A1-205, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 448 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-205ENST00000505377 PTGER2P43116 358 aa17.47■□□□□ 0.39
COL25A1-205ENST00000505377 COL18A1P39060 1754 aa17.47■□□□□ 0.39
COL25A1-205ENST00000505377 SLIT3O75094 1523 aa17.47■□□□□ 0.39
COL25A1-205ENST00000505377 DCAF8L1A6NGE4 600 aa17.46■□□□□ 0.39
COL25A1-205ENST00000505377 C11orf95C9JLR9 678 aaPredicted RBP17.46■□□□□ 0.39
COL25A1-205ENST00000505377 KIAA1210Q9ULL0 1709 aa17.45■□□□□ 0.38
COL25A1-205ENST00000505377 SOX12O15370 315 aa17.45■□□□□ 0.38
COL25A1-205ENST00000505377 WDR17Q8IZU2 1322 aa17.45■□□□□ 0.38
COL25A1-205ENST00000505377 RGPD3A6NKT7 1758 aaPredicted RBP17.43■□□□□ 0.38
COL25A1-205ENST00000505377 RGPD4Q7Z3J3 1758 aa17.43■□□□□ 0.38
COL25A1-205ENST00000505377 PIK3C2AO00443 1686 aa17.43■□□□□ 0.38
COL25A1-205ENST00000505377 TXNRD1Q16881 649 aa17.43■□□□□ 0.38
COL25A1-205ENST00000505377 ARHGEF25Q86VW2 580 aa17.43■□□□□ 0.38
COL25A1-205ENST00000505377 MYOM1P52179 1685 aa17.42■□□□□ 0.38
COL25A1-205ENST00000505377 BRD4O60885 1362 aaPredicted RBP17.42■□□□□ 0.38
COL25A1-205ENST00000505377 RGPD5Q99666 1765 aa17.41■□□□□ 0.38
COL25A1-205ENST00000505377 ZNF784Q8NCA9 323 aaPredicted RBP17.41■□□□□ 0.38
COL25A1-205ENST00000505377 CPSF1Q10570 1443 aaKnown RBP17.4■□□□□ 0.38
COL25A1-205ENST00000505377 QRICH2Q9H0J4 1663 aa17.4■□□□□ 0.38
COL25A1-205ENST00000505377 CSB-PGBD3P0DP91 1061 aa17.4■□□□□ 0.38
COL25A1-205ENST00000505377 SLC15A2Q16348 729 aa17.4■□□□□ 0.38
COL25A1-205ENST00000505377 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
COL25A1-205ENST00000505377 FHDC1Q9C0D6 1143 aaPredicted RBP17.4■□□□□ 0.38
COL25A1-205ENST00000505377 STK32BQ9NY57 414 aa17.4■□□□□ 0.38
COL25A1-205ENST00000505377 TTC21BQ7Z4L5 1316 aa17.4■□□□□ 0.38
COL25A1-205ENST00000505377 WNK3Q9BYP7 1800 aa17.4■□□□□ 0.38
COL25A1-205ENST00000505377 BCL9O00512 1426 aa17.39■□□□□ 0.38
COL25A1-205ENST00000505377 UTRNP46939 3433 aa17.39■□□□□ 0.37
COL25A1-205ENST00000505377 SYT17Q9BSW7 474 aa17.39■□□□□ 0.37
COL25A1-205ENST00000505377 SGIP1Q9BQI5 828 aa17.38■□□□□ 0.37
COL25A1-205ENST00000505377 CDCA7Q9BWT1 371 aaPredicted RBP17.38■□□□□ 0.37
COL25A1-205ENST00000505377 EXOC5O00471 708 aa17.37■□□□□ 0.37
COL25A1-205ENST00000505377 ACSBG1Q96GR2 724 aa17.37■□□□□ 0.37
COL25A1-205ENST00000505377 AKAP12Q02952 1782 aa17.37■□□□□ 0.37
COL25A1-205ENST00000505377 EVC2Q86UK5 1308 aa17.35■□□□□ 0.37
COL25A1-205ENST00000505377 KCNH5Q8NCM2 988 aa17.34■□□□□ 0.37
COL25A1-205ENST00000505377 L3MBTL2Q969R5 705 aa17.34■□□□□ 0.37
COL25A1-205ENST00000505377 MTFR1LQ9H019 292 aa17.34■□□□□ 0.37
COL25A1-205ENST00000505377 NFAT5O94916 1531 aa17.33■□□□□ 0.37
COL25A1-205ENST00000505377 ZNF827Q17R98 1081 aa17.32■□□□□ 0.36
COL25A1-205ENST00000505377 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
COL25A1-205ENST00000505377 TNS2Q63HR2 1409 aa17.31■□□□□ 0.36
COL25A1-205ENST00000505377 ARXQ96QS3 562 aa17.31■□□□□ 0.36
COL25A1-205ENST00000505377 CCDC7Q96M83 1385 aa17.3■□□□□ 0.36
COL25A1-205ENST00000505377 TTC21AQ8NDW8 1320 aa17.3■□□□□ 0.36
COL25A1-205ENST00000505377 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.3■□□□□ 0.36
COL25A1-205ENST00000505377 LRRC4BQ9NT99 713 aa17.3■□□□□ 0.36
COL25A1-205ENST00000505377 NLRP2Q9NX02 1062 aa17.3■□□□□ 0.36
COL25A1-205ENST00000505377 KAT6BQ8WYB5 2073 aa17.3■□□□□ 0.36
COL25A1-205ENST00000505377 KTN1Q86UP2 1357 aaKnown RBP17.29■□□□□ 0.36
COL25A1-205ENST00000505377 TRPM1Q7Z4N2 1603 aa17.29■□□□□ 0.36
COL25A1-205ENST00000505377 SIN3AQ96ST3 1273 aa17.29■□□□□ 0.36
COL25A1-205ENST00000505377 NME9Q86XW9 330 aa17.28■□□□□ 0.36
COL25A1-205ENST00000505377 NHSQ6T4R5 1651 aa17.28■□□□□ 0.36
COL25A1-205ENST00000505377 PAPPAQ13219 1627 aa17.27■□□□□ 0.36
COL25A1-205ENST00000505377 ERBB3P21860 1342 aa17.26■□□□□ 0.35
COL25A1-205ENST00000505377 SENP3-EIF4A1A0A087X0R7 540 aa17.26■□□□□ 0.35
COL25A1-205ENST00000505377 CHD4Q14839 1912 aa17.25■□□□□ 0.35
COL25A1-205ENST00000505377 IL2RBP14784 551 aa17.25■□□□□ 0.35
COL25A1-205ENST00000505377 KCNQ4P56696 695 aa17.25■□□□□ 0.35
COL25A1-205ENST00000505377 C1QTNF8P60827 252 aa17.25■□□□□ 0.35
COL25A1-205ENST00000505377 BTAF1O14981 1849 aa17.24■□□□□ 0.35
COL25A1-205ENST00000505377 ANKRD24Q8TF21 1146 aa17.24■□□□□ 0.35
COL25A1-205ENST00000505377 ABCC6O95255 1503 aa17.24■□□□□ 0.35
COL25A1-205ENST00000505377 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
COL25A1-205ENST00000505377 USP31Q70CQ4 1352 aa17.24■□□□□ 0.35
COL25A1-205ENST00000505377 KLHL34Q8N239 644 aa17.23■□□□□ 0.35
COL25A1-205ENST00000505377 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
COL25A1-205ENST00000505377 GPR162Q16538 588 aa17.22■□□□□ 0.35
COL25A1-205ENST00000505377 MAP3K5Q99683 1374 aa17.22■□□□□ 0.35
COL25A1-205ENST00000505377 SBNO2Q9Y2G9 1366 aa17.22■□□□□ 0.35
COL25A1-205ENST00000505377 CD163L1Q9NR16 1453 aa17.22■□□□□ 0.35
COL25A1-205ENST00000505377 NEUROD1Q13562 356 aa17.21■□□□□ 0.35
COL25A1-205ENST00000505377 DDX54Q8TDD1 881 aaKnown RBP17.21■□□□□ 0.35
COL25A1-205ENST00000505377 MON2Q7Z3U7 1717 aa17.21■□□□□ 0.35
COL25A1-205ENST00000505377 PELP1Q8IZL8 1130 aaKnown RBP17.2■□□□□ 0.34
COL25A1-205ENST00000505377 NLGN2Q8NFZ4 835 aa17.2■□□□□ 0.34
COL25A1-205ENST00000505377 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
COL25A1-205ENST00000505377 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
COL25A1-205ENST00000505377 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
COL25A1-205ENST00000505377 LTV1Q96GA3 475 aaPredicted RBP17.19■□□□□ 0.34
COL25A1-205ENST00000505377 LTN1O94822 1766 aa17.19■□□□□ 0.34
COL25A1-205ENST00000505377 GOLGB1Q14789 3259 aaKnown RBP17.18■□□□□ 0.34
COL25A1-205ENST00000505377 FBLN1P23142 703 aa17.16■□□□□ 0.34
COL25A1-205ENST00000505377 PRIM1P49642 420 aaKnown RBP17.16■□□□□ 0.34
COL25A1-205ENST00000505377 SLC27A3Q5K4L6 730 aa17.15■□□□□ 0.34
COL25A1-205ENST00000505377 SLC16A10Q8TF71 515 aa17.15■□□□□ 0.34
COL25A1-205ENST00000505377 SYTL4Q96C24 671 aaPredicted RBP17.15■□□□□ 0.34
COL25A1-205ENST00000505377 TFCP2L1Q9NZI6 479 aa17.15■□□□□ 0.34
COL25A1-205ENST00000505377 USP54Q70EL1 1684 aa17.15■□□□□ 0.34
COL25A1-205ENST00000505377 POLD1P28340 1107 aa17.14■□□□□ 0.33
COL25A1-205ENST00000505377 IP6K1Q92551 441 aa17.14■□□□□ 0.33
COL25A1-205ENST00000505377 TUBGCP6Q96RT7 1819 aa17.14■□□□□ 0.33
COL25A1-205ENST00000505377 YBX3P16989 372 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL25A1-205ENST00000505377 HDGFL2Q7Z4V5 671 aaPredicted RBP17.13■□□□□ 0.33
COL25A1-205ENST00000505377 NSD2O96028 1365 aa17.13■□□□□ 0.33
COL25A1-205ENST00000505377 GIGYF1O75420 1035 aaPredicted RBP17.12■□□□□ 0.33
COL25A1-205ENST00000505377 A0A1W2PP64 1363 aa17.12■□□□□ 0.33
COL25A1-205ENST00000505377 CEP350Q5VT06 3117 aa17.11■□□□□ 0.33
COL25A1-205ENST00000505377 COL24A1Q17RW2 1714 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms