RNA–Protein interactions for RNA: ENST00000505205.1

TRIM23-204, Transcript of tripartite motif containing 23, humanhuman

TSL 3

Gene TRIM23, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-204ENST00000505205 THRAP3Q9Y2W1 955 aaKnown RBP13.51□□□□□ -0.25
TRIM23-204ENST00000505205 WNK3Q9BYP7 1800 aa13.5□□□□□ -0.25
TRIM23-204ENST00000505205 PTF1AQ7RTS3 328 aa13.5□□□□□ -0.25
TRIM23-204ENST00000505205 ABTB2Q8N961 1025 aa13.5□□□□□ -0.25
TRIM23-204ENST00000505205 KDM2AQ9Y2K7 1162 aa13.5□□□□□ -0.25
TRIM23-204ENST00000505205 CRB1P82279 1406 aa13.49□□□□□ -0.25
TRIM23-204ENST00000505205 PLSCR1O15162 318 aa13.49□□□□□ -0.25
TRIM23-204ENST00000505205 ABCB7O75027 752 aa13.49□□□□□ -0.25
TRIM23-204ENST00000505205 ZBTB7AO95365 584 aa13.49□□□□□ -0.25
TRIM23-204ENST00000505205 DSG3P32926 999 aa13.49□□□□□ -0.25
TRIM23-204ENST00000505205 CDK19Q9BWU1 502 aa13.49□□□□□ -0.25
TRIM23-204ENST00000505205 C11orf95C9JLR9 678 aaPredicted RBP13.48□□□□□ -0.25
TRIM23-204ENST00000505205 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
TRIM23-204ENST00000505205 AKAP12Q02952 1782 aa13.48□□□□□ -0.25
TRIM23-204ENST00000505205 CHD4Q14839 1912 aa13.47□□□□□ -0.25
TRIM23-204ENST00000505205 PTGER2P43116 358 aa13.47□□□□□ -0.25
TRIM23-204ENST00000505205 POLA2Q14181 598 aa13.47□□□□□ -0.25
TRIM23-204ENST00000505205 SENP3-EIF4A1A0A087X0R7 540 aa13.46□□□□□ -0.25
TRIM23-204ENST00000505205 GCP02774 474 aa13.46□□□□□ -0.25
TRIM23-204ENST00000505205 PROM2Q8N271 834 aa13.46□□□□□ -0.25
TRIM23-204ENST00000505205 BCL11BQ9C0K0 894 aaPredicted RBP13.46□□□□□ -0.25
TRIM23-204ENST00000505205 CCDC61Q9Y6R9 512 aa13.46□□□□□ -0.25
TRIM23-204ENST00000505205 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
TRIM23-204ENST00000505205 ZBTB7CA1YPR0 619 aa13.45□□□□□ -0.26
TRIM23-204ENST00000505205 DDB1Q16531 1140 aa13.45□□□□□ -0.26
TRIM23-204ENST00000505205 NLRP13Q86W25 1043 aa13.44□□□□□ -0.26
TRIM23-204ENST00000505205 FHDC1Q9C0D6 1143 aaPredicted RBP13.44□□□□□ -0.26
TRIM23-204ENST00000505205 COL18A1P39060 1754 aa13.44□□□□□ -0.26
TRIM23-204ENST00000505205 SYT17Q9BSW7 474 aa13.43□□□□□ -0.26
TRIM23-204ENST00000505205 SLIT3O75094 1523 aa13.43□□□□□ -0.26
TRIM23-204ENST00000505205 PPIP5K1Q6PFW1 1433 aa13.42□□□□□ -0.26
TRIM23-204ENST00000505205 C1QTNF8P60827 252 aa13.42□□□□□ -0.26
TRIM23-204ENST00000505205 MARCH10Q8NA82 808 aaPredicted RBP13.42□□□□□ -0.26
TRIM23-204ENST00000505205 AATKQ6ZMQ8 1374 aa13.42□□□□□ -0.26
TRIM23-204ENST00000505205 RGPD5Q99666 1765 aa13.41□□□□□ -0.26
TRIM23-204ENST00000505205 TXNRD1Q16881 649 aa13.41□□□□□ -0.26
TRIM23-204ENST00000505205 TOM1L2Q6ZVM7 507 aa13.41□□□□□ -0.26
TRIM23-204ENST00000505205 STK32BQ9NY57 414 aa13.41□□□□□ -0.26
TRIM23-204ENST00000505205 PIK3C2AO00443 1686 aa13.4□□□□□ -0.26
TRIM23-204ENST00000505205 BCL9O00512 1426 aa13.4□□□□□ -0.26
TRIM23-204ENST00000505205 SLC15A2Q16348 729 aa13.4□□□□□ -0.26
TRIM23-204ENST00000505205 SGIP1Q9BQI5 828 aa13.4□□□□□ -0.26
TRIM23-204ENST00000505205 RAB3GAP2Q9H2M9 1393 aa13.4□□□□□ -0.26
TRIM23-204ENST00000505205 KIAA1210Q9ULL0 1709 aa13.39□□□□□ -0.27
TRIM23-204ENST00000505205 STAC3Q96MF2 364 aa13.39□□□□□ -0.27
TRIM23-204ENST00000505205 MTFR1LQ9H019 292 aa13.39□□□□□ -0.27
TRIM23-204ENST00000505205 WDR17Q8IZU2 1322 aa13.39□□□□□ -0.27
TRIM23-204ENST00000505205 NLRP6P59044 892 aa13.38□□□□□ -0.27
TRIM23-204ENST00000505205 AXIN2Q9Y2T1 843 aa13.38□□□□□ -0.27
TRIM23-204ENST00000505205 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
TRIM23-204ENST00000505205 USP6P35125 1406 aa13.38□□□□□ -0.27
TRIM23-204ENST00000505205 NHSQ6T4R5 1651 aa13.37□□□□□ -0.27
TRIM23-204ENST00000505205 SRPK2P78362 688 aaKnown RBP13.37□□□□□ -0.27
TRIM23-204ENST00000505205 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
TRIM23-204ENST00000505205 CABP2Q9NPB3 220 aa13.37□□□□□ -0.27
TRIM23-204ENST00000505205 QRICH2Q9H0J4 1663 aa13.37□□□□□ -0.27
TRIM23-204ENST00000505205 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
TRIM23-204ENST00000505205 GOLGB1Q14789 3259 aaKnown RBP13.36□□□□□ -0.27
TRIM23-204ENST00000505205 CDCA7Q9BWT1 371 aaPredicted RBP13.36□□□□□ -0.27
TRIM23-204ENST00000505205 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
TRIM23-204ENST00000505205 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
TRIM23-204ENST00000505205 ARXQ96QS3 562 aa13.35□□□□□ -0.27
TRIM23-204ENST00000505205 MAP3K5Q99683 1374 aa13.34□□□□□ -0.27
TRIM23-204ENST00000505205 TNS2Q63HR2 1409 aa13.34□□□□□ -0.27
TRIM23-204ENST00000505205 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
TRIM23-204ENST00000505205 NBPF1Q3BBV0 1214 aa13.33□□□□□ -0.28
TRIM23-204ENST00000505205 CARD10Q9BWT7 1032 aa13.33□□□□□ -0.28
TRIM23-204ENST00000505205 CABP1Q9NZU7 370 aa13.33□□□□□ -0.28
TRIM23-204ENST00000505205 BTAF1O14981 1849 aa13.33□□□□□ -0.28
TRIM23-204ENST00000505205 EXOC5O00471 708 aa13.32□□□□□ -0.28
TRIM23-204ENST00000505205 CSB-PGBD3P0DP91 1061 aa13.32□□□□□ -0.28
TRIM23-204ENST00000505205 ARHGEF25Q86VW2 580 aa13.32□□□□□ -0.28
TRIM23-204ENST00000505205 SHANK3Q9BYB0 1731 aa13.32□□□□□ -0.28
TRIM23-204ENST00000505205 CENPJQ9HC77 1338 aaPredicted RBP13.32□□□□□ -0.28
TRIM23-204ENST00000505205 ABCC6O95255 1503 aa13.31□□□□□ -0.28
TRIM23-204ENST00000505205 SOX12O15370 315 aa13.31□□□□□ -0.28
TRIM23-204ENST00000505205 GIGYF1O75420 1035 aaPredicted RBP13.31□□□□□ -0.28
TRIM23-204ENST00000505205 GPR162Q16538 588 aa13.31□□□□□ -0.28
TRIM23-204ENST00000505205 ZNF827Q17R98 1081 aa13.31□□□□□ -0.28
TRIM23-204ENST00000505205 ACSBG1Q96GR2 724 aa13.31□□□□□ -0.28
TRIM23-204ENST00000505205 NFAT5O94916 1531 aa13.3□□□□□ -0.28
TRIM23-204ENST00000505205 CCDC7Q96M83 1385 aa13.3□□□□□ -0.28
TRIM23-204ENST00000505205 COL24A1Q17RW2 1714 aa13.3□□□□□ -0.28
TRIM23-204ENST00000505205 KLHL34Q8N239 644 aa13.29□□□□□ -0.28
TRIM23-204ENST00000505205 QSER1Q2KHR3 1735 aa13.29□□□□□ -0.28
TRIM23-204ENST00000505205 TUBGCP6Q96RT7 1819 aa13.29□□□□□ -0.28
TRIM23-204ENST00000505205 LRRC4BQ9NT99 713 aa13.28□□□□□ -0.28
TRIM23-204ENST00000505205 PELP1Q8IZL8 1130 aaKnown RBP13.27□□□□□ -0.29
TRIM23-204ENST00000505205 KCNH5Q8NCM2 988 aa13.27□□□□□ -0.29
TRIM23-204ENST00000505205 TTC21BQ7Z4L5 1316 aa13.27□□□□□ -0.29
TRIM23-204ENST00000505205 KAT6BQ8WYB5 2073 aa13.26□□□□□ -0.29
TRIM23-204ENST00000505205 NLGN2Q8NFZ4 835 aa13.25□□□□□ -0.29
TRIM23-204ENST00000505205 LTN1O94822 1766 aa13.25□□□□□ -0.29
TRIM23-204ENST00000505205 AKT1S1Q96B36 256 aa13.24□□□□□ -0.29
TRIM23-204ENST00000505205 PNPLA7Q6ZV29 1317 aa13.23□□□□□ -0.29
TRIM23-204ENST00000505205 TTC21AQ8NDW8 1320 aa13.23□□□□□ -0.29
TRIM23-204ENST00000505205 MON2Q7Z3U7 1717 aa13.23□□□□□ -0.29
TRIM23-204ENST00000505205 POLD1P28340 1107 aa13.23□□□□□ -0.29
TRIM23-204ENST00000505205 MKRN4PQ13434 485 aaPredicted RBP13.23□□□□□ -0.29
TRIM23-204ENST00000505205 USP54Q70EL1 1684 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms