RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 STRN4Q9NRL3 753 aa24.73■■□□□ 1.55
DDR1-254ENST00000504679 PLCH1Q4KWH8 1693 aa24.72■■□□□ 1.55
DDR1-254ENST00000504679 POTEAQ6S8J7 498 aa24.71■■□□□ 1.55
DDR1-254ENST00000504679 CCDC9Q9Y3X0 531 aaKnown RBP24.71■■□□□ 1.55
DDR1-254ENST00000504679 LTN1O94822 1766 aa24.71■■□□□ 1.55
DDR1-254ENST00000504679 CAMTA1Q9Y6Y1 1673 aa24.71■■□□□ 1.55
DDR1-254ENST00000504679 PPM1GO15355 546 aaPredicted RBP24.7■■□□□ 1.54
DDR1-254ENST00000504679 VPS72Q15906 364 aa24.7■■□□□ 1.54
DDR1-254ENST00000504679 COL18A1P39060 1754 aa24.7■■□□□ 1.54
DDR1-254ENST00000504679 HOXC9P31274 260 aa24.69■■□□□ 1.54
DDR1-254ENST00000504679 POLKQ9UBT6 870 aa24.69■■□□□ 1.54
DDR1-254ENST00000504679 MAP2P11137 1827 aaKnown RBP24.69■■□□□ 1.54
DDR1-254ENST00000504679 RXRBP28702 533 aa24.68■■□□□ 1.54
DDR1-254ENST00000504679 GJD4Q96KN9 370 aaPredicted RBP24.68■■□□□ 1.54
DDR1-254ENST00000504679 LMO7Q8WWI1 1683 aa24.68■■□□□ 1.54
DDR1-254ENST00000504679 KIF24Q5T7B8 1368 aa24.67■■□□□ 1.54
DDR1-254ENST00000504679 CSB-PGBD3P0DP91 1061 aa24.67■■□□□ 1.54
DDR1-254ENST00000504679 RBM6P78332 1123 aaKnown RBP24.67■■□□□ 1.54
DDR1-254ENST00000504679 EMILIN1Q9Y6C2 1016 aa24.67■■□□□ 1.54
DDR1-254ENST00000504679 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.66■■□□□ 1.54
DDR1-254ENST00000504679 ABCC6O95255 1503 aa24.66■■□□□ 1.54
DDR1-254ENST00000504679 RGPD5Q99666 1765 aa24.65■■□□□ 1.54
DDR1-254ENST00000504679 ATRNO75882 1429 aa24.65■■□□□ 1.54
DDR1-254ENST00000504679 BLMP54132 1417 aaPredicted RBP24.65■■□□□ 1.54
DDR1-254ENST00000504679 LARP1Q6PKG0 1096 aaKnown RBP24.65■■□□□ 1.54
DDR1-254ENST00000504679 ANKRD24Q8TF21 1146 aa24.65■■□□□ 1.54
DDR1-254ENST00000504679 RTL1A6NKG5 1358 aa24.65■■□□□ 1.54
DDR1-254ENST00000504679 COL5A2P05997 1499 aaPredicted RBP24.64■■□□□ 1.54
DDR1-254ENST00000504679 TOM1L2Q6ZVM7 507 aa24.64■■□□□ 1.54
DDR1-254ENST00000504679 FLT4P35916 1363 aa24.64■■□□□ 1.53
DDR1-254ENST00000504679 NRAPQ86VF7 1730 aa24.64■■□□□ 1.53
DDR1-254ENST00000504679 WDR17Q8IZU2 1322 aa24.63■■□□□ 1.53
DDR1-254ENST00000504679 HSP90AB2PQ58FF8 381 aa24.63■■□□□ 1.53
DDR1-254ENST00000504679 LTV1Q96GA3 475 aaPredicted RBP24.63■■□□□ 1.53
DDR1-254ENST00000504679 SPATA31A5Q5VU36 1347 aa24.62■■□□□ 1.53
DDR1-254ENST00000504679 SPATA31A7Q8IWB4 1347 aa24.62■■□□□ 1.53
DDR1-254ENST00000504679 MTHFSP49914 203 aa24.61■■□□□ 1.53
DDR1-254ENST00000504679 INSRP06213 1382 aa24.61■■□□□ 1.53
DDR1-254ENST00000504679 USP35Q9P2H5 1018 aa24.6■■□□□ 1.53
DDR1-254ENST00000504679 ERBB3P21860 1342 aa24.6■■□□□ 1.53
DDR1-254ENST00000504679 SPATA31A1Q5TZJ5 1347 aa24.6■■□□□ 1.53
DDR1-254ENST00000504679 RALBP1Q15311 655 aa24.59■■□□□ 1.53
DDR1-254ENST00000504679 NLRP2Q9NX02 1062 aa24.59■■□□□ 1.53
DDR1-254ENST00000504679 CRB1P82279 1406 aa24.59■■□□□ 1.53
DDR1-254ENST00000504679 CARD10Q9BWT7 1032 aa24.58■■□□□ 1.53
DDR1-254ENST00000504679 THRAP3Q9Y2W1 955 aaKnown RBP24.58■■□□□ 1.53
DDR1-254ENST00000504679 TCP11L2Q8N4U5 519 aa24.57■■□□□ 1.52
DDR1-254ENST00000504679 PEAK1Q9H792 1746 aa24.56■■□□□ 1.52
DDR1-254ENST00000504679 SMG6Q86US8 1419 aaKnown RBP24.56■■□□□ 1.52
DDR1-254ENST00000504679 PPP2R1AP30153 589 aa24.56■■□□□ 1.52
DDR1-254ENST00000504679 ONECUT3O60422 494 aaPredicted RBP24.55■■□□□ 1.52
DDR1-254ENST00000504679 FAM98CQ17RN3 349 aaKnown RBP24.54■■□□□ 1.52
DDR1-254ENST00000504679 PARD3Q8TEW0 1356 aa24.54■■□□□ 1.52
DDR1-254ENST00000504679 BARGINQ6ZT62 677 aa24.53■■□□□ 1.52
DDR1-254ENST00000504679 GLI3P10071 1580 aa24.51■■□□□ 1.51
DDR1-254ENST00000504679 A0A0G2JS52 829 aa24.51■■□□□ 1.51
DDR1-254ENST00000504679 MYT1Q01538 1121 aa24.51■■□□□ 1.51
DDR1-254ENST00000504679 EIF4A2Q14240 407 aaKnown RBP24.51■■□□□ 1.51
DDR1-254ENST00000504679 CFAP53Q96M91 514 aa24.51■■□□□ 1.51
DDR1-254ENST00000504679 NBPF6Q5VWK0 638 aa24.5■■□□□ 1.51
DDR1-254ENST00000504679 NBPF4Q96M43 638 aa24.5■■□□□ 1.51
DDR1-254ENST00000504679 CDK12Q9NYV4 1490 aaPredicted RBP24.5■■□□□ 1.51
DDR1-254ENST00000504679 CDCA7Q9BWT1 371 aaPredicted RBP24.49■■□□□ 1.51
DDR1-254ENST00000504679 PRKRIP1Q9H875 184 aaPredicted RBP24.49■■□□□ 1.51
DDR1-254ENST00000504679 DIAPH1O60610 1272 aaKnown RBP24.48■■□□□ 1.51
DDR1-254ENST00000504679 SEPT12Q8IYM1 358 aa24.48■■□□□ 1.51
DDR1-254ENST00000504679 FAM208AQ9UK61 1670 aaKnown RBP24.47■■□□□ 1.51
DDR1-254ENST00000504679 ANP32CO43423 234 aa24.46■■□□□ 1.51
DDR1-254ENST00000504679 EYA1Q99502 592 aa24.46■■□□□ 1.51
DDR1-254ENST00000504679 MYBBP1AQ9BQG0 1328 aaKnown RBP24.45■■□□□ 1.5
DDR1-254ENST00000504679 IL13P35225 146 aa24.45■■□□□ 1.5
DDR1-254ENST00000504679 IL2RBP14784 551 aa24.44■■□□□ 1.5
DDR1-254ENST00000504679 ILDR2Q71H61 639 aa24.44■■□□□ 1.5
DDR1-254ENST00000504679 RGPD2P0DJD1 1756 aa24.44■■□□□ 1.5
DDR1-254ENST00000504679 USHBP1Q8N6Y0 703 aa24.43■■□□□ 1.5
DDR1-254ENST00000504679 EXOC5O00471 708 aa24.42■■□□□ 1.5
DDR1-254ENST00000504679 RAPGEF4Q8WZA2 1011 aa24.42■■□□□ 1.5
DDR1-254ENST00000504679 NUDCQ9Y266 331 aa24.42■■□□□ 1.5
DDR1-254ENST00000504679 DDB1Q16531 1140 aa24.41■■□□□ 1.5
DDR1-254ENST00000504679 RGS12O14924 1447 aa24.41■■□□□ 1.5
DDR1-254ENST00000504679 PDE3BQ13370 1112 aa24.4■■□□□ 1.5
DDR1-254ENST00000504679 TATP17735 454 aaPredicted RBP24.39■■□□□ 1.49
DDR1-254ENST00000504679 KRT27Q7Z3Y8 459 aa24.39■■□□□ 1.49
DDR1-254ENST00000504679 IGSF1Q8N6C5 1336 aa24.38■■□□□ 1.49
DDR1-254ENST00000504679 U2SURPO15042 1029 aaKnown RBP24.37■■□□□ 1.49
DDR1-254ENST00000504679 SULT6B1Q6IMI4 303 aa24.37■■□□□ 1.49
DDR1-254ENST00000504679 THSD7AQ9UPZ6 1657 aa24.36■■□□□ 1.49
DDR1-254ENST00000504679 DISP2A7MBM2 1401 aa24.35■■□□□ 1.49
DDR1-254ENST00000504679 ZCRB1Q8TBF4 217 aaKnown RBP24.34■■□□□ 1.49
DDR1-254ENST00000504679 COL3A1P02461 1466 aaPredicted RBP24.33■■□□□ 1.49
DDR1-254ENST00000504679 NCAPD2Q15021 1401 aa24.33■■□□□ 1.49
DDR1-254ENST00000504679 BRWD3Q6RI45 1802 aa24.33■■□□□ 1.48
DDR1-254ENST00000504679 PARP4Q9UKK3 1724 aaKnown RBP24.32■■□□□ 1.48
DDR1-254ENST00000504679 WNK3Q9BYP7 1800 aa24.32■■□□□ 1.48
DDR1-254ENST00000504679 HMOX1P09601 288 aa24.31■■□□□ 1.48
DDR1-254ENST00000504679 U2AF1L5P0DN76 240 aaPredicted RBP24.31■■□□□ 1.48
DDR1-254ENST00000504679 U2AF1Q01081 240 aaKnown RBP eCLIP24.31■■□□□ 1.48
DDR1-254ENST00000504679 AEBP1Q8IUX7 1158 aa24.31■■□□□ 1.48
DDR1-254ENST00000504679 DIEXFQ68CQ4 756 aaKnown RBP24.3■■□□□ 1.48
DDR1-254ENST00000504679 SPG7Q9UQ90 795 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms