RNA–Protein interactions for RNA: ENST00000504526.1

TRAPPC11-203, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-203ENST00000504526 BRWD3Q6RI45 1802 aa29.45■■■□□ 2.31
TRAPPC11-203ENST00000504526 THRAP3Q9Y2W1 955 aaKnown RBP29.45■■■□□ 2.31
TRAPPC11-203ENST00000504526 COL18A1P39060 1754 aa29.44■■■□□ 2.3
TRAPPC11-203ENST00000504526 THSD7AQ9UPZ6 1657 aa29.44■■■□□ 2.3
TRAPPC11-203ENST00000504526 TCP11L2Q8N4U5 519 aa29.44■■■□□ 2.3
TRAPPC11-203ENST00000504526 USP35Q9P2H5 1018 aa29.44■■■□□ 2.3
TRAPPC11-203ENST00000504526 CRB1P82279 1406 aa29.44■■■□□ 2.3
TRAPPC11-203ENST00000504526 COG3Q96JB2 828 aa29.43■■■□□ 2.3
TRAPPC11-203ENST00000504526 AXIN2Q9Y2T1 843 aa29.42■■■□□ 2.3
TRAPPC11-203ENST00000504526 WDR17Q8IZU2 1322 aa29.41■■■□□ 2.3
TRAPPC11-203ENST00000504526 MYOM1P52179 1685 aa29.38■■■□□ 2.29
TRAPPC11-203ENST00000504526 TOM1L2Q6ZVM7 507 aa29.38■■■□□ 2.29
TRAPPC11-203ENST00000504526 BLMP54132 1417 aaPredicted RBP29.36■■■□□ 2.29
TRAPPC11-203ENST00000504526 FYB1O15117 783 aa29.35■■■□□ 2.29
TRAPPC11-203ENST00000504526 CSB-PGBD3P0DP91 1061 aa29.35■■■□□ 2.29
TRAPPC11-203ENST00000504526 POLR3GLQ9BT43 218 aa29.33■■■□□ 2.29
TRAPPC11-203ENST00000504526 CARD10Q9BWT7 1032 aa29.32■■■□□ 2.28
TRAPPC11-203ENST00000504526 LTN1O94822 1766 aa29.31■■■□□ 2.28
TRAPPC11-203ENST00000504526 SF3B2Q13435 895 aaKnown RBP29.31■■■□□ 2.28
TRAPPC11-203ENST00000504526 GGNBP2Q9H3C7 697 aa29.31■■■□□ 2.28
TRAPPC11-203ENST00000504526 NSD3Q9BZ95 1437 aa29.3■■■□□ 2.28
TRAPPC11-203ENST00000504526 PDE3BQ13370 1112 aa29.3■■■□□ 2.28
TRAPPC11-203ENST00000504526 CDCA7Q9BWT1 371 aaPredicted RBP29.3■■■□□ 2.28
TRAPPC11-203ENST00000504526 CARD14Q9BXL6 1004 aa29.3■■■□□ 2.28
TRAPPC11-203ENST00000504526 RGPD5Q99666 1765 aa29.3■■■□□ 2.28
TRAPPC11-203ENST00000504526 ERBB3P21860 1342 aa29.29■■■□□ 2.28
TRAPPC11-203ENST00000504526 CCDC7Q96M83 1385 aa29.28■■■□□ 2.28
TRAPPC11-203ENST00000504526 IP6K1Q92551 441 aa29.28■■■□□ 2.28
TRAPPC11-203ENST00000504526 EP400Q96L91 3159 aa29.27■■■□□ 2.28
TRAPPC11-203ENST00000504526 PARP4Q9UKK3 1724 aaKnown RBP29.26■■■□□ 2.27
TRAPPC11-203ENST00000504526 FAM196AQ6ZSG2 479 aa29.26■■■□□ 2.27
TRAPPC11-203ENST00000504526 KIF20BQ96Q89 1820 aa29.26■■■□□ 2.27
TRAPPC11-203ENST00000504526 MAP3K19Q56UN5 1328 aa29.25■■■□□ 2.27
TRAPPC11-203ENST00000504526 CGNL1Q0VF96 1302 aa29.24■■■□□ 2.27
TRAPPC11-203ENST00000504526 FAM182BQ5T319 152 aa29.24■■■□□ 2.27
TRAPPC11-203ENST00000504526 ANKRD24Q8TF21 1146 aa29.24■■■□□ 2.27
TRAPPC11-203ENST00000504526 C11orf95C9JLR9 678 aaPredicted RBP29.23■■■□□ 2.27
TRAPPC11-203ENST00000504526 AMPHP49418 695 aa29.23■■■□□ 2.27
TRAPPC11-203ENST00000504526 RTL1A6NKG5 1358 aa29.23■■■□□ 2.27
TRAPPC11-203ENST00000504526 DDB1Q16531 1140 aa29.22■■■□□ 2.27
TRAPPC11-203ENST00000504526 NLRP2Q9NX02 1062 aa29.22■■■□□ 2.27
TRAPPC11-203ENST00000504526 HOXC9P31274 260 aa29.21■■■□□ 2.27
TRAPPC11-203ENST00000504526 WNK3Q9BYP7 1800 aa29.19■■■□□ 2.26
TRAPPC11-203ENST00000504526 DISP2A7MBM2 1401 aa29.19■■■□□ 2.26
TRAPPC11-203ENST00000504526 BAG6P46379 1132 aa29.18■■■□□ 2.26
TRAPPC11-203ENST00000504526 PANK3Q9H999 370 aa29.18■■■□□ 2.26
TRAPPC11-203ENST00000504526 LRRC37A3O60309 1634 aa29.17■■■□□ 2.26
TRAPPC11-203ENST00000504526 KIF24Q5T7B8 1368 aa29.17■■■□□ 2.26
TRAPPC11-203ENST00000504526 FBLN1P23142 703 aa29.17■■■□□ 2.26
TRAPPC11-203ENST00000504526 RRS1Q15050 365 aaKnown RBP29.17■■■□□ 2.26
TRAPPC11-203ENST00000504526 RGPD1P0DJD0 1748 aa29.17■■■□□ 2.26
TRAPPC11-203ENST00000504526 FAM208AQ9UK61 1670 aaKnown RBP29.15■■■□□ 2.26
TRAPPC11-203ENST00000504526 OVOS2A0A0G2JMS6 1433 aa29.15■■■□□ 2.26
TRAPPC11-203ENST00000504526 DEFB132Q7Z7B7 95 aa29.15■■■□□ 2.26
TRAPPC11-203ENST00000504526 EXOC5O00471 708 aa29.13■■■□□ 2.25
TRAPPC11-203ENST00000504526 LTV1Q96GA3 475 aaPredicted RBP29.13■■■□□ 2.25
TRAPPC11-203ENST00000504526 KIF7Q2M1P5 1343 aa29.13■■■□□ 2.25
TRAPPC11-203ENST00000504526 TRIM37O94972 964 aa29.12■■■□□ 2.25
TRAPPC11-203ENST00000504526 IL2RBP14784 551 aa29.12■■■□□ 2.25
TRAPPC11-203ENST00000504526 FLT4P35916 1363 aa29.12■■■□□ 2.25
TRAPPC11-203ENST00000504526 NSD2O96028 1365 aa29.1■■■□□ 2.25
TRAPPC11-203ENST00000504526 TNS2Q63HR2 1409 aa29.1■■■□□ 2.25
TRAPPC11-203ENST00000504526 SMG6Q86US8 1419 aaKnown RBP29.1■■■□□ 2.25
TRAPPC11-203ENST00000504526 INSRP06213 1382 aa29.09■■■□□ 2.25
TRAPPC11-203ENST00000504526 TNS1Q9HBL0 1735 aaKnown RBP29.08■■■□□ 2.25
TRAPPC11-203ENST00000504526 BCL9O00512 1426 aa29.07■■■□□ 2.24
TRAPPC11-203ENST00000504526 PEAK1Q9H792 1746 aa29.07■■■□□ 2.24
TRAPPC11-203ENST00000504526 MARCH10Q8NA82 808 aaPredicted RBP29.06■■■□□ 2.24
TRAPPC11-203ENST00000504526 ANKRD26Q9UPS8 1709 aa29.06■■■□□ 2.24
TRAPPC11-203ENST00000504526 KNSTRNQ9Y448 316 aa29.05■■■□□ 2.24
TRAPPC11-203ENST00000504526 HSP90AB2PQ58FF8 381 aa29.04■■■□□ 2.24
TRAPPC11-203ENST00000504526 EMILIN1Q9Y6C2 1016 aa29.04■■■□□ 2.24
TRAPPC11-203ENST00000504526 APBA3O96018 575 aa29.03■■■□□ 2.24
TRAPPC11-203ENST00000504526 EN1Q05925 392 aaPredicted RBP29.03■■■□□ 2.24
TRAPPC11-203ENST00000504526 PARD3Q8TEW0 1356 aa29.02■■■□□ 2.24
TRAPPC11-203ENST00000504526 PPM1GO15355 546 aaPredicted RBP29■■■□□ 2.23
TRAPPC11-203ENST00000504526 NBPF6Q5VWK0 638 aa29■■■□□ 2.23
TRAPPC11-203ENST00000504526 NBPF4Q96M43 638 aa29■■■□□ 2.23
TRAPPC11-203ENST00000504526 WASHC2AQ641Q2 1341 aa28.99■■■□□ 2.23
TRAPPC11-203ENST00000504526 POLKQ9UBT6 870 aa28.99■■■□□ 2.23
TRAPPC11-203ENST00000504526 MORC1Q86VD1 984 aa28.97■■■□□ 2.23
TRAPPC11-203ENST00000504526 CAMKK2Q96RR4 588 aa28.97■■■□□ 2.23
TRAPPC11-203ENST00000504526 BCL11BQ9C0K0 894 aaPredicted RBP28.97■■■□□ 2.23
TRAPPC11-203ENST00000504526 TNNT2P45379 298 aaPredicted RBP28.96■■■□□ 2.23
TRAPPC11-203ENST00000504526 MAP2P11137 1827 aaKnown RBP28.95■■■□□ 2.23
TRAPPC11-203ENST00000504526 EZH2Q15910 746 aaKnown RBP28.95■■■□□ 2.22
TRAPPC11-203ENST00000504526 SBF2Q86WG5 1849 aa28.94■■■□□ 2.22
TRAPPC11-203ENST00000504526 RGPD2P0DJD1 1756 aa28.94■■■□□ 2.22
TRAPPC11-203ENST00000504526 RAPGEF4Q8WZA2 1011 aa28.94■■■□□ 2.22
TRAPPC11-203ENST00000504526 AMER1Q5JTC6 1135 aaPredicted RBP28.93■■■□□ 2.22
TRAPPC11-203ENST00000504526 MEGF6O75095 1541 aa28.91■■■□□ 2.22
TRAPPC11-203ENST00000504526 PLSCR1O15162 318 aa28.91■■■□□ 2.22
TRAPPC11-203ENST00000504526 PER1O15534 1290 aaPredicted RBP28.91■■■□□ 2.22
TRAPPC11-203ENST00000504526 USHBP1Q8N6Y0 703 aa28.91■■■□□ 2.22
TRAPPC11-203ENST00000504526 ZCRB1Q8TBF4 217 aaKnown RBP28.91■■■□□ 2.22
TRAPPC11-203ENST00000504526 TATP17735 454 aaPredicted RBP28.9■■■□□ 2.22
TRAPPC11-203ENST00000504526 DDX54Q8TDD1 881 aaKnown RBP28.89■■■□□ 2.22
TRAPPC11-203ENST00000504526 NCAPD2Q15021 1401 aa28.87■■■□□ 2.21
TRAPPC11-203ENST00000504526 RGPD3A6NKT7 1758 aaPredicted RBP28.86■■■□□ 2.21
TRAPPC11-203ENST00000504526 RGPD4Q7Z3J3 1758 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms