RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
CYSTM1-202ENST00000504227 CDK12Q9NYV4 1490 aaPredicted RBP18.54■□□□□ 0.56
CYSTM1-202ENST00000504227 FAM83GA6ND36 823 aa18.54■□□□□ 0.56
CYSTM1-202ENST00000504227 DIAPH1O60610 1272 aaKnown RBP18.54■□□□□ 0.56
CYSTM1-202ENST00000504227 ADAMTS2O95450 1211 aa18.54■□□□□ 0.56
CYSTM1-202ENST00000504227 WDR43Q15061 677 aaKnown RBP eCLIP18.52■□□□□ 0.56
CYSTM1-202ENST00000504227 ABCA3Q99758 1704 aa18.52■□□□□ 0.55
CYSTM1-202ENST00000504227 PNISRQ8TF01 805 aaKnown RBP18.51■□□□□ 0.55
CYSTM1-202ENST00000504227 LTV1Q96GA3 475 aaPredicted RBP18.51■□□□□ 0.55
CYSTM1-202ENST00000504227 AXIN2Q9Y2T1 843 aa18.51■□□□□ 0.55
CYSTM1-202ENST00000504227 LTN1O94822 1766 aa18.5■□□□□ 0.55
CYSTM1-202ENST00000504227 BLMP54132 1417 aaPredicted RBP18.5■□□□□ 0.55
CYSTM1-202ENST00000504227 IL13P35225 146 aa18.5■□□□□ 0.55
CYSTM1-202ENST00000504227 EIF4A2Q14240 407 aaKnown RBP18.5■□□□□ 0.55
CYSTM1-202ENST00000504227 PEAK1Q9H792 1746 aa18.49■□□□□ 0.55
CYSTM1-202ENST00000504227 MEX3CQ5U5Q3 659 aaKnown RBP18.49■□□□□ 0.55
CYSTM1-202ENST00000504227 ANKRD24Q8TF21 1146 aa18.49■□□□□ 0.55
CYSTM1-202ENST00000504227 COL3A1P02461 1466 aaPredicted RBP18.48■□□□□ 0.55
CYSTM1-202ENST00000504227 U2SURPO15042 1029 aaKnown RBP18.48■□□□□ 0.55
CYSTM1-202ENST00000504227 EVA1CP58658 441 aa18.48■□□□□ 0.55
CYSTM1-202ENST00000504227 ABCC6O95255 1503 aa18.48■□□□□ 0.55
CYSTM1-202ENST00000504227 U2AF1L5P0DN76 240 aaPredicted RBP18.47■□□□□ 0.55
CYSTM1-202ENST00000504227 U2AF1Q01081 240 aaKnown RBP eCLIP18.47■□□□□ 0.55
CYSTM1-202ENST00000504227 FAM9BQ8IZU0 186 aa18.47■□□□□ 0.55
CYSTM1-202ENST00000504227 NGLY1Q96IV0 654 aa18.47■□□□□ 0.55
CYSTM1-202ENST00000504227 CSB-PGBD3P0DP91 1061 aa18.46■□□□□ 0.55
CYSTM1-202ENST00000504227 BTG4Q9NY30 223 aa18.46■□□□□ 0.55
CYSTM1-202ENST00000504227 C8orf37Q96NL8 207 aa18.45■□□□□ 0.54
CYSTM1-202ENST00000504227 ERBB3P21860 1342 aa18.45■□□□□ 0.54
CYSTM1-202ENST00000504227 COL18A1P39060 1754 aa18.45■□□□□ 0.54
CYSTM1-202ENST00000504227 STRN4Q9NRL3 753 aa18.44■□□□□ 0.54
CYSTM1-202ENST00000504227 ADAMTS8Q9UP79 889 aa18.44■□□□□ 0.54
CYSTM1-202ENST00000504227 COL14A1Q05707 1796 aaKnown RBP18.44■□□□□ 0.54
CYSTM1-202ENST00000504227 EYA1Q99502 592 aa18.43■□□□□ 0.54
CYSTM1-202ENST00000504227 NLRP2Q9NX02 1062 aa18.43■□□□□ 0.54
CYSTM1-202ENST00000504227 CAMTA1Q9Y6Y1 1673 aa18.43■□□□□ 0.54
CYSTM1-202ENST00000504227 LRP6O75581 1613 aa18.42■□□□□ 0.54
CYSTM1-202ENST00000504227 PNNQ9H307 717 aaKnown RBP18.42■□□□□ 0.54
CYSTM1-202ENST00000504227 NBPF6Q5VWK0 638 aa18.41■□□□□ 0.54
CYSTM1-202ENST00000504227 TOM1L2Q6ZVM7 507 aa18.41■□□□□ 0.54
CYSTM1-202ENST00000504227 NBPF4Q96M43 638 aa18.41■□□□□ 0.54
CYSTM1-202ENST00000504227 WDR17Q8IZU2 1322 aa18.41■□□□□ 0.54
CYSTM1-202ENST00000504227 LMO7Q8WWI1 1683 aa18.41■□□□□ 0.54
CYSTM1-202ENST00000504227 FCHSD2O94868 740 aa18.4■□□□□ 0.54
CYSTM1-202ENST00000504227 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
CYSTM1-202ENST00000504227 FNBP4Q8N3X1 1017 aaPredicted RBP18.4■□□□□ 0.54
CYSTM1-202ENST00000504227 IGSF1Q8N6C5 1336 aa18.4■□□□□ 0.54
CYSTM1-202ENST00000504227 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
CYSTM1-202ENST00000504227 COL5A2P05997 1499 aaPredicted RBP18.39■□□□□ 0.54
CYSTM1-202ENST00000504227 HMOX1P09601 288 aa18.39■□□□□ 0.53
CYSTM1-202ENST00000504227 LARP1Q6PKG0 1096 aaKnown RBP18.39■□□□□ 0.53
CYSTM1-202ENST00000504227 UNC5CLQ8IV45 518 aa18.39■□□□□ 0.53
CYSTM1-202ENST00000504227 CARD10Q9BWT7 1032 aa18.38■□□□□ 0.53
CYSTM1-202ENST00000504227 SLIT2O94813 1529 aa18.38■□□□□ 0.53
CYSTM1-202ENST00000504227 NEFMP07197 916 aa18.37■□□□□ 0.53
CYSTM1-202ENST00000504227 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
CYSTM1-202ENST00000504227 USP21Q9UK80 565 aa18.37■□□□□ 0.53
CYSTM1-202ENST00000504227 AEBP1Q8IUX7 1158 aa18.36■□□□□ 0.53
CYSTM1-202ENST00000504227 RSPH6AQ9H0K4 717 aa18.36■□□□□ 0.53
CYSTM1-202ENST00000504227 AFF2P51816 1311 aa18.35■□□□□ 0.53
CYSTM1-202ENST00000504227 PRKAR2BP31323 418 aa18.35■□□□□ 0.53
CYSTM1-202ENST00000504227 RUNDC1Q96C34 613 aa18.35■□□□□ 0.53
CYSTM1-202ENST00000504227 PLCH1Q4KWH8 1693 aa18.34■□□□□ 0.53
CYSTM1-202ENST00000504227 CRB1P82279 1406 aa18.34■□□□□ 0.53
CYSTM1-202ENST00000504227 ILDR1Q86SU0 546 aaPredicted RBP18.34■□□□□ 0.53
CYSTM1-202ENST00000504227 CCDC146Q8IYE0 955 aa18.34■□□□□ 0.53
CYSTM1-202ENST00000504227 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
CYSTM1-202ENST00000504227 KDRP35968 1356 aa18.33■□□□□ 0.53
CYSTM1-202ENST00000504227 MAPK8IP3Q9UPT6 1336 aa18.33■□□□□ 0.53
CYSTM1-202ENST00000504227 NWD2Q9ULI1 1742 aa18.33■□□□□ 0.52
CYSTM1-202ENST00000504227 VPS72Q15906 364 aa18.33■□□□□ 0.52
CYSTM1-202ENST00000504227 RAPGEF4Q8WZA2 1011 aa18.33■□□□□ 0.52
CYSTM1-202ENST00000504227 BCL9LQ86UU0 1499 aa18.33■□□□□ 0.52
CYSTM1-202ENST00000504227 RGPD1P0DJD0 1748 aa18.32■□□□□ 0.52
CYSTM1-202ENST00000504227 PLEKHF1Q96S99 279 aa18.32■□□□□ 0.52
CYSTM1-202ENST00000504227 USP35Q9P2H5 1018 aa18.32■□□□□ 0.52
CYSTM1-202ENST00000504227 FAM208AQ9UK61 1670 aaKnown RBP18.31■□□□□ 0.52
CYSTM1-202ENST00000504227 SPATA31A5Q5VU36 1347 aa18.31■□□□□ 0.52
CYSTM1-202ENST00000504227 SPATA31A7Q8IWB4 1347 aa18.31■□□□□ 0.52
CYSTM1-202ENST00000504227 TATP17735 454 aaPredicted RBP18.31■□□□□ 0.52
CYSTM1-202ENST00000504227 TCP11L2Q8N4U5 519 aa18.31■□□□□ 0.52
CYSTM1-202ENST00000504227 NCAPD2Q15021 1401 aa18.31■□□□□ 0.52
CYSTM1-202ENST00000504227 RGPD2P0DJD1 1756 aa18.3■□□□□ 0.52
CYSTM1-202ENST00000504227 SPATA31A1Q5TZJ5 1347 aa18.3■□□□□ 0.52
CYSTM1-202ENST00000504227 THRAP3Q9Y2W1 955 aaKnown RBP18.3■□□□□ 0.52
CYSTM1-202ENST00000504227 IL2RBP14784 551 aa18.29■□□□□ 0.52
CYSTM1-202ENST00000504227 PLEKHO1Q53GL0 409 aaPredicted RBP18.29■□□□□ 0.52
CYSTM1-202ENST00000504227 PHACTR3Q96KR7 559 aa18.29■□□□□ 0.52
CYSTM1-202ENST00000504227 TRPC5Q9UL62 973 aaPredicted RBP18.29■□□□□ 0.52
CYSTM1-202ENST00000504227 APAF1O14727 1248 aa18.28■□□□□ 0.52
CYSTM1-202ENST00000504227 ZNF772Q68DY9 489 aaPredicted RBP18.28■□□□□ 0.52
CYSTM1-202ENST00000504227 NRAPQ86VF7 1730 aa18.28■□□□□ 0.52
CYSTM1-202ENST00000504227 AMOTQ4VCS5 1084 aa18.27■□□□□ 0.52
CYSTM1-202ENST00000504227 CDCA7Q9BWT1 371 aaPredicted RBP18.27■□□□□ 0.52
CYSTM1-202ENST00000504227 QTRT2Q9H974 415 aaKnown RBP18.27■□□□□ 0.52
CYSTM1-202ENST00000504227 HNRNPUQ00839 825 aaKnown RBP eCLIP18.26■□□□□ 0.51
CYSTM1-202ENST00000504227 GAS2L2Q8NHY3 880 aa18.26■□□□□ 0.51
CYSTM1-202ENST00000504227 SPG7Q9UQ90 795 aa18.26■□□□□ 0.51
CYSTM1-202ENST00000504227 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
CYSTM1-202ENST00000504227 NFE2L2Q16236 605 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms