RNA–Protein interactions for RNA: ENST00000503856.5

PDGFRA-203, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 3

Gene PDGFRA, Length 586 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-203ENST00000503856 AXIN2Q9Y2T1 843 aa28.57■■■□□ 2.16
PDGFRA-203ENST00000503856 COL5A2P05997 1499 aaPredicted RBP28.57■■■□□ 2.16
PDGFRA-203ENST00000503856 ONECUT3O60422 494 aaPredicted RBP28.56■■■□□ 2.16
PDGFRA-203ENST00000503856 LARP1Q6PKG0 1096 aaKnown RBP28.56■■■□□ 2.16
PDGFRA-203ENST00000503856 SPATA31A1Q5TZJ5 1347 aa28.55■■■□□ 2.16
PDGFRA-203ENST00000503856 FAM98CQ17RN3 349 aaKnown RBP28.55■■■□□ 2.16
PDGFRA-203ENST00000503856 SEPT12Q8IYM1 358 aa28.54■■■□□ 2.16
PDGFRA-203ENST00000503856 KIF7Q2M1P5 1343 aa28.53■■■□□ 2.16
PDGFRA-203ENST00000503856 USP35Q9P2H5 1018 aa28.52■■■□□ 2.16
PDGFRA-203ENST00000503856 PANK3Q9H999 370 aa28.51■■■□□ 2.15
PDGFRA-203ENST00000503856 ABCC6O95255 1503 aa28.5■■■□□ 2.15
PDGFRA-203ENST00000503856 FBLN1P23142 703 aa28.5■■■□□ 2.15
PDGFRA-203ENST00000503856 A0A0G2JS52 829 aa28.49■■■□□ 2.15
PDGFRA-203ENST00000503856 MYT1Q01538 1121 aa28.49■■■□□ 2.15
PDGFRA-203ENST00000503856 CRB1P82279 1406 aa28.47■■■□□ 2.15
PDGFRA-203ENST00000503856 THSD7AQ9UPZ6 1657 aa28.47■■■□□ 2.15
PDGFRA-203ENST00000503856 CGNL1Q0VF96 1302 aa28.46■■■□□ 2.15
PDGFRA-203ENST00000503856 WDR17Q8IZU2 1322 aa28.46■■■□□ 2.15
PDGFRA-203ENST00000503856 TOM1L2Q6ZVM7 507 aa28.45■■■□□ 2.14
PDGFRA-203ENST00000503856 TCP11L2Q8N4U5 519 aa28.45■■■□□ 2.14
PDGFRA-203ENST00000503856 UPF1Q92900 1129 aaKnown RBP eCLIP28.45■■■□□ 2.14
PDGFRA-203ENST00000503856 MAP3K19Q56UN5 1328 aa28.43■■■□□ 2.14
PDGFRA-203ENST00000503856 CSB-PGBD3P0DP91 1061 aa28.43■■■□□ 2.14
PDGFRA-203ENST00000503856 BARGINQ6ZT62 677 aa28.43■■■□□ 2.14
PDGFRA-203ENST00000503856 ANKRD26Q9UPS8 1709 aa28.43■■■□□ 2.14
PDGFRA-203ENST00000503856 IP6K1Q92551 441 aa28.42■■■□□ 2.14
PDGFRA-203ENST00000503856 MAP2P11137 1827 aaKnown RBP28.41■■■□□ 2.14
PDGFRA-203ENST00000503856 CCDC7Q96M83 1385 aa28.41■■■□□ 2.14
PDGFRA-203ENST00000503856 RRS1Q15050 365 aaKnown RBP28.41■■■□□ 2.14
PDGFRA-203ENST00000503856 KRT27Q7Z3Y8 459 aa28.41■■■□□ 2.14
PDGFRA-203ENST00000503856 THRAP3Q9Y2W1 955 aaKnown RBP28.41■■■□□ 2.14
PDGFRA-203ENST00000503856 WASHC2AQ641Q2 1341 aa28.41■■■□□ 2.14
PDGFRA-203ENST00000503856 AMPHP49418 695 aa28.4■■■□□ 2.14
PDGFRA-203ENST00000503856 ERBB3P21860 1342 aa28.39■■■□□ 2.13
PDGFRA-203ENST00000503856 BLMP54132 1417 aaPredicted RBP28.38■■■□□ 2.13
PDGFRA-203ENST00000503856 WNK3Q9BYP7 1800 aa28.38■■■□□ 2.13
PDGFRA-203ENST00000503856 HOXC9P31274 260 aa28.37■■■□□ 2.13
PDGFRA-203ENST00000503856 ANKRD24Q8TF21 1146 aa28.37■■■□□ 2.13
PDGFRA-203ENST00000503856 CARD10Q9BWT7 1032 aa28.37■■■□□ 2.13
PDGFRA-203ENST00000503856 PARP4Q9UKK3 1724 aaKnown RBP28.36■■■□□ 2.13
PDGFRA-203ENST00000503856 KNSTRNQ9Y448 316 aa28.35■■■□□ 2.13
PDGFRA-203ENST00000503856 PEAK1Q9H792 1746 aa28.35■■■□□ 2.13
PDGFRA-203ENST00000503856 RGPD2P0DJD1 1756 aa28.34■■■□□ 2.13
PDGFRA-203ENST00000503856 LTV1Q96GA3 475 aaPredicted RBP28.34■■■□□ 2.13
PDGFRA-203ENST00000503856 NLRP2Q9NX02 1062 aa28.34■■■□□ 2.13
PDGFRA-203ENST00000503856 EP400Q96L91 3159 aa28.34■■■□□ 2.13
PDGFRA-203ENST00000503856 RTL1A6NKG5 1358 aa28.33■■■□□ 2.13
PDGFRA-203ENST00000503856 FAM208AQ9UK61 1670 aaKnown RBP28.32■■■□□ 2.12
PDGFRA-203ENST00000503856 FAM182BQ5T319 152 aa28.32■■■□□ 2.12
PDGFRA-203ENST00000503856 NSD2O96028 1365 aa28.3■■■□□ 2.12
PDGFRA-203ENST00000503856 EMILIN1Q9Y6C2 1016 aa28.3■■■□□ 2.12
PDGFRA-203ENST00000503856 TNNT2P45379 298 aaPredicted RBP28.29■■■□□ 2.12
PDGFRA-203ENST00000503856 PER1O15534 1290 aaPredicted RBP28.28■■■□□ 2.12
PDGFRA-203ENST00000503856 PDE3BQ13370 1112 aa28.28■■■□□ 2.12
PDGFRA-203ENST00000503856 LRRC37A3O60309 1634 aa28.28■■■□□ 2.12
PDGFRA-203ENST00000503856 FLT4P35916 1363 aa28.27■■■□□ 2.12
PDGFRA-203ENST00000503856 KIF24Q5T7B8 1368 aa28.27■■■□□ 2.12
PDGFRA-203ENST00000503856 HSP90AB2PQ58FF8 381 aa28.27■■■□□ 2.12
PDGFRA-203ENST00000503856 DISP2A7MBM2 1401 aa28.26■■■□□ 2.12
PDGFRA-203ENST00000503856 AMER1Q5JTC6 1135 aaPredicted RBP28.26■■■□□ 2.11
PDGFRA-203ENST00000503856 CDCA7Q9BWT1 371 aaPredicted RBP28.26■■■□□ 2.11
PDGFRA-203ENST00000503856 PPM1GO15355 546 aaPredicted RBP28.25■■■□□ 2.11
PDGFRA-203ENST00000503856 MORC1Q86VD1 984 aa28.25■■■□□ 2.11
PDGFRA-203ENST00000503856 POLKQ9UBT6 870 aa28.25■■■□□ 2.11
PDGFRA-203ENST00000503856 INSRP06213 1382 aa28.24■■■□□ 2.11
PDGFRA-203ENST00000503856 DDB1Q16531 1140 aa28.24■■■□□ 2.11
PDGFRA-203ENST00000503856 CCDC125Q86Z20 511 aa28.23■■■□□ 2.11
PDGFRA-203ENST00000503856 FAM196AQ6ZSG2 479 aa28.2■■■□□ 2.1
PDGFRA-203ENST00000503856 SMG6Q86US8 1419 aaKnown RBP28.19■■■□□ 2.1
PDGFRA-203ENST00000503856 IL2RBP14784 551 aa28.19■■■□□ 2.1
PDGFRA-203ENST00000503856 ZEB1P37275 1124 aaPredicted RBP28.19■■■□□ 2.1
PDGFRA-203ENST00000503856 EXOC5O00471 708 aa28.18■■■□□ 2.1
PDGFRA-203ENST00000503856 NBPF6Q5VWK0 638 aa28.18■■■□□ 2.1
PDGFRA-203ENST00000503856 NBPF4Q96M43 638 aa28.18■■■□□ 2.1
PDGFRA-203ENST00000503856 RGPD1P0DJD0 1748 aa28.18■■■□□ 2.1
PDGFRA-203ENST00000503856 CC2D1BQ5T0F9 858 aaKnown RBP28.17■■■□□ 2.1
PDGFRA-203ENST00000503856 KAT6BQ8WYB5 2073 aa28.17■■■□□ 2.1
PDGFRA-203ENST00000503856 SBF2Q86WG5 1849 aa28.16■■■□□ 2.1
PDGFRA-203ENST00000503856 SF3B2Q13435 895 aaKnown RBP28.15■■■□□ 2.1
PDGFRA-203ENST00000503856 USHBP1Q8N6Y0 703 aa28.15■■■□□ 2.1
PDGFRA-203ENST00000503856 MARCH10Q8NA82 808 aaPredicted RBP28.15■■■□□ 2.1
PDGFRA-203ENST00000503856 TNS2Q63HR2 1409 aa28.14■■■□□ 2.1
PDGFRA-203ENST00000503856 TNS1Q9HBL0 1735 aaKnown RBP28.13■■■□□ 2.09
PDGFRA-203ENST00000503856 OVOS2A0A0G2JMS6 1433 aa28.13■■■□□ 2.09
PDGFRA-203ENST00000503856 CNGB1Q14028 1251 aaPredicted RBP28.13■■■□□ 2.09
PDGFRA-203ENST00000503856 TRIM37O94972 964 aa28.12■■■□□ 2.09
PDGFRA-203ENST00000503856 NPC1L1Q9UHC9 1359 aa28.11■■■□□ 2.09
PDGFRA-203ENST00000503856 DEFB132Q7Z7B7 95 aa28.11■■■□□ 2.09
PDGFRA-203ENST00000503856 MEGF6O75095 1541 aa28.08■■■□□ 2.09
PDGFRA-203ENST00000503856 EIF4A2Q14240 407 aaKnown RBP28.08■■■□□ 2.09
PDGFRA-203ENST00000503856 EYA1Q99502 592 aa28.07■■■□□ 2.08
PDGFRA-203ENST00000503856 SHANK3Q9BYB0 1731 aa28.06■■■□□ 2.08
PDGFRA-203ENST00000503856 BAG6P46379 1132 aa28.05■■■□□ 2.08
PDGFRA-203ENST00000503856 RAPGEF4Q8WZA2 1011 aa28.05■■■□□ 2.08
PDGFRA-203ENST00000503856 BCL9O00512 1426 aa28.03■■■□□ 2.08
PDGFRA-203ENST00000503856 NCAPD2Q15021 1401 aa28.03■■■□□ 2.08
PDGFRA-203ENST00000503856 MTHFSP49914 203 aa28.03■■■□□ 2.08
PDGFRA-203ENST00000503856 ZCRB1Q8TBF4 217 aaKnown RBP28.03■■■□□ 2.08
PDGFRA-203ENST00000503856 DDX54Q8TDD1 881 aaKnown RBP28.03■■■□□ 2.08
PDGFRA-203ENST00000503856 TATP17735 454 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms