RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 BRD4O60885 1362 aaPredicted RBP22.91■■□□□ 1.26
DDR1-250ENST00000503628 ATF5Q9Y2D1 282 aaPredicted RBP22.91■■□□□ 1.26
DDR1-250ENST00000503628 PTGER2P43116 358 aa22.9■■□□□ 1.26
DDR1-250ENST00000503628 CABP1Q9NZU7 370 aa22.9■■□□□ 1.26
DDR1-250ENST00000503628 AXIN2Q9Y2T1 843 aa22.9■■□□□ 1.26
DDR1-250ENST00000503628 COL18A1P39060 1754 aa22.9■■□□□ 1.26
DDR1-250ENST00000503628 MYOM1P52179 1685 aa22.89■■□□□ 1.25
DDR1-250ENST00000503628 SLIT3O75094 1523 aa22.88■■□□□ 1.25
DDR1-250ENST00000503628 ZNF784Q8NCA9 323 aaPredicted RBP22.88■■□□□ 1.25
DDR1-250ENST00000503628 USP6P35125 1406 aa22.88■■□□□ 1.25
DDR1-250ENST00000503628 WNK3Q9BYP7 1800 aa22.87■■□□□ 1.25
DDR1-250ENST00000503628 WDR17Q8IZU2 1322 aa22.87■■□□□ 1.25
DDR1-250ENST00000503628 CENPJQ9HC77 1338 aaPredicted RBP22.87■■□□□ 1.25
DDR1-250ENST00000503628 AKAP12Q02952 1782 aa22.87■■□□□ 1.25
DDR1-250ENST00000503628 TXNRD1Q16881 649 aa22.86■■□□□ 1.25
DDR1-250ENST00000503628 STK32BQ9NY57 414 aa22.86■■□□□ 1.25
DDR1-250ENST00000503628 BCL9O00512 1426 aa22.85■■□□□ 1.25
DDR1-250ENST00000503628 CDCA7Q9BWT1 371 aaPredicted RBP22.85■■□□□ 1.25
DDR1-250ENST00000503628 RGPD5Q99666 1765 aa22.84■■□□□ 1.25
DDR1-250ENST00000503628 SLC15A2Q16348 729 aa22.84■■□□□ 1.25
DDR1-250ENST00000503628 SYT17Q9BSW7 474 aa22.84■■□□□ 1.25
DDR1-250ENST00000503628 FHDC1Q9C0D6 1143 aaPredicted RBP22.84■■□□□ 1.25
DDR1-250ENST00000503628 PIK3C2AO00443 1686 aa22.83■■□□□ 1.24
DDR1-250ENST00000503628 UTRNP46939 3433 aa22.82■■□□□ 1.24
DDR1-250ENST00000503628 ARHGEF25Q86VW2 580 aa22.82■■□□□ 1.24
DDR1-250ENST00000503628 CARD10Q9BWT7 1032 aa22.82■■□□□ 1.24
DDR1-250ENST00000503628 QRICH2Q9H0J4 1663 aa22.81■■□□□ 1.24
DDR1-250ENST00000503628 EXOC5O00471 708 aa22.81■■□□□ 1.24
DDR1-250ENST00000503628 CPSF1Q10570 1443 aaKnown RBP22.81■■□□□ 1.24
DDR1-250ENST00000503628 CSB-PGBD3P0DP91 1061 aa22.8■■□□□ 1.24
DDR1-250ENST00000503628 CHD4Q14839 1912 aa22.79■■□□□ 1.24
DDR1-250ENST00000503628 SOX12O15370 315 aa22.79■■□□□ 1.24
DDR1-250ENST00000503628 MTFR1LQ9H019 292 aa22.79■■□□□ 1.24
DDR1-250ENST00000503628 TRIM26Q12899 539 aaPredicted RBP22.78■■□□□ 1.24
DDR1-250ENST00000503628 SGIP1Q9BQI5 828 aa22.78■■□□□ 1.24
DDR1-250ENST00000503628 KCNH5Q8NCM2 988 aa22.77■■□□□ 1.24
DDR1-250ENST00000503628 TTC21BQ7Z4L5 1316 aa22.76■■□□□ 1.23
DDR1-250ENST00000503628 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
DDR1-250ENST00000503628 ACSBG1Q96GR2 724 aa22.73■■□□□ 1.23
DDR1-250ENST00000503628 ARXQ96QS3 562 aa22.73■■□□□ 1.23
DDR1-250ENST00000503628 ZNF692Q9BU19 519 aaPredicted RBP22.73■■□□□ 1.23
DDR1-250ENST00000503628 EVC2Q86UK5 1308 aa22.73■■□□□ 1.23
DDR1-250ENST00000503628 C1QTNF8P60827 252 aa22.72■■□□□ 1.23
DDR1-250ENST00000503628 CCDC7Q96M83 1385 aa22.72■■□□□ 1.23
DDR1-250ENST00000503628 NHSQ6T4R5 1651 aa22.71■■□□□ 1.23
DDR1-250ENST00000503628 TNS2Q63HR2 1409 aa22.7■■□□□ 1.22
DDR1-250ENST00000503628 KAT6BQ8WYB5 2073 aa22.7■■□□□ 1.22
DDR1-250ENST00000503628 TRPM1Q7Z4N2 1603 aa22.69■■□□□ 1.22
DDR1-250ENST00000503628 NFAT5O94916 1531 aa22.69■■□□□ 1.22
DDR1-250ENST00000503628 TTC21AQ8NDW8 1320 aa22.69■■□□□ 1.22
DDR1-250ENST00000503628 PAPPAQ13219 1627 aa22.66■■□□□ 1.22
DDR1-250ENST00000503628 MAP3K5Q99683 1374 aa22.65■■□□□ 1.22
DDR1-250ENST00000503628 GPR162Q16538 588 aa22.65■■□□□ 1.22
DDR1-250ENST00000503628 ZNF827Q17R98 1081 aa22.65■■□□□ 1.22
DDR1-250ENST00000503628 NLRP2Q9NX02 1062 aa22.65■■□□□ 1.22
DDR1-250ENST00000503628 BTAF1O14981 1849 aa22.65■■□□□ 1.22
DDR1-250ENST00000503628 LRRC4BQ9NT99 713 aa22.64■■□□□ 1.21
DDR1-250ENST00000503628 KTN1Q86UP2 1357 aaKnown RBP22.63■■□□□ 1.21
DDR1-250ENST00000503628 ABCC6O95255 1503 aa22.63■■□□□ 1.21
DDR1-250ENST00000503628 IL2RBP14784 551 aa22.62■■□□□ 1.21
DDR1-250ENST00000503628 ERBB3P21860 1342 aa22.61■■□□□ 1.21
DDR1-250ENST00000503628 L3MBTL2Q969R5 705 aa22.61■■□□□ 1.21
DDR1-250ENST00000503628 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.6■■□□□ 1.21
DDR1-250ENST00000503628 KLHL34Q8N239 644 aa22.6■■□□□ 1.21
DDR1-250ENST00000503628 AKT1S1Q96B36 256 aa22.58■■□□□ 1.21
DDR1-250ENST00000503628 PELP1Q8IZL8 1130 aaKnown RBP22.57■■□□□ 1.2
DDR1-250ENST00000503628 ANKRD24Q8TF21 1146 aa22.57■■□□□ 1.2
DDR1-250ENST00000503628 SLC16A10Q8TF71 515 aa22.57■■□□□ 1.2
DDR1-250ENST00000503628 USP31Q70CQ4 1352 aa22.57■■□□□ 1.2
DDR1-250ENST00000503628 LTN1O94822 1766 aa22.57■■□□□ 1.2
DDR1-250ENST00000503628 MON2Q7Z3U7 1717 aa22.57■■□□□ 1.2
DDR1-250ENST00000503628 NME9Q86XW9 330 aa22.56■■□□□ 1.2
DDR1-250ENST00000503628 GOLGB1Q14789 3259 aaKnown RBP22.56■■□□□ 1.2
DDR1-250ENST00000503628 GIGYF1O75420 1035 aaPredicted RBP22.55■■□□□ 1.2
DDR1-250ENST00000503628 POLD1P28340 1107 aa22.55■■□□□ 1.2
DDR1-250ENST00000503628 QSER1Q2KHR3 1735 aa22.54■■□□□ 1.2
DDR1-250ENST00000503628 ROCK2O75116 1388 aaKnown RBP22.53■■□□□ 1.2
DDR1-250ENST00000503628 SLC27A3Q5K4L6 730 aa22.53■■□□□ 1.2
DDR1-250ENST00000503628 DDX54Q8TDD1 881 aaKnown RBP22.53■■□□□ 1.2
DDR1-250ENST00000503628 COL24A1Q17RW2 1714 aa22.53■■□□□ 1.2
DDR1-250ENST00000503628 PNPLA7Q6ZV29 1317 aa22.53■■□□□ 1.2
DDR1-250ENST00000503628 USP54Q70EL1 1684 aa22.52■■□□□ 1.2
DDR1-250ENST00000503628 KCNQ4P56696 695 aa22.52■■□□□ 1.2
DDR1-250ENST00000503628 NLGN2Q8NFZ4 835 aa22.51■■□□□ 1.19
DDR1-250ENST00000503628 TFCP2L1Q9NZI6 479 aa22.51■■□□□ 1.19
DDR1-250ENST00000503628 SBNO2Q9Y2G9 1366 aa22.5■■□□□ 1.19
DDR1-250ENST00000503628 CEP350Q5VT06 3117 aa22.5■■□□□ 1.19
DDR1-250ENST00000503628 TUBGCP6Q96RT7 1819 aa22.5■■□□□ 1.19
DDR1-250ENST00000503628 IFFO2Q5TF58 517 aa22.49■■□□□ 1.19
DDR1-250ENST00000503628 CD163L1Q9NR16 1453 aa22.48■■□□□ 1.19
DDR1-250ENST00000503628 TMC1Q8TDI8 760 aa22.48■■□□□ 1.19
DDR1-250ENST00000503628 SYTL4Q96C24 671 aaPredicted RBP22.48■■□□□ 1.19
DDR1-250ENST00000503628 SIN3AQ96ST3 1273 aa22.48■■□□□ 1.19
DDR1-250ENST00000503628 PRIM1P49642 420 aaKnown RBP22.47■■□□□ 1.19
DDR1-250ENST00000503628 SHANK3Q9BYB0 1731 aa22.47■■□□□ 1.19
DDR1-250ENST00000503628 LTV1Q96GA3 475 aaPredicted RBP22.46■■□□□ 1.19
DDR1-250ENST00000503628 PCGF6Q9BYE7 350 aa22.46■■□□□ 1.19
DDR1-250ENST00000503628 SLC12A5Q9H2X9 1139 aa22.46■■□□□ 1.19
DDR1-250ENST00000503628 YBX3P16989 372 aaKnown RBP eCLIP22.45■■□□□ 1.18
DDR1-250ENST00000503628 HDGFL2Q7Z4V5 671 aaPredicted RBP22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms