RNA–Protein interactions for RNA: ENST00000502961.1

TSC22D3-210, Transcript of TSC22 domain family member 3, humanhuman

TSL 4

Gene TSC22D3, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D3-210ENST00000502961 KIF20BQ96Q89 1820 aa16.68■□□□□ 0.26
TSC22D3-210ENST00000502961 LARP1Q6PKG0 1096 aaKnown RBP16.68■□□□□ 0.26
TSC22D3-210ENST00000502961 GLI3P10071 1580 aa16.68■□□□□ 0.26
TSC22D3-210ENST00000502961 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
TSC22D3-210ENST00000502961 RGS12O14924 1447 aa16.67■□□□□ 0.26
TSC22D3-210ENST00000502961 RRS1Q15050 365 aaKnown RBP16.66■□□□□ 0.26
TSC22D3-210ENST00000502961 KNSTRNQ9Y448 316 aa16.66■□□□□ 0.26
TSC22D3-210ENST00000502961 COL18A1P39060 1754 aa16.66■□□□□ 0.26
TSC22D3-210ENST00000502961 COL5A2P05997 1499 aaPredicted RBP16.66■□□□□ 0.26
TSC22D3-210ENST00000502961 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
TSC22D3-210ENST00000502961 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
TSC22D3-210ENST00000502961 TNNT2P45379 298 aaPredicted RBP16.65■□□□□ 0.26
TSC22D3-210ENST00000502961 MAP3K19Q56UN5 1328 aa16.65■□□□□ 0.26
TSC22D3-210ENST00000502961 CSB-PGBD3P0DP91 1061 aa16.64■□□□□ 0.25
TSC22D3-210ENST00000502961 CNGB1Q14028 1251 aaPredicted RBP16.64■□□□□ 0.25
TSC22D3-210ENST00000502961 FAM98CQ17RN3 349 aaKnown RBP16.64■□□□□ 0.25
TSC22D3-210ENST00000502961 A0A0G2JS52 829 aa16.63■□□□□ 0.25
TSC22D3-210ENST00000502961 AMPHP49418 695 aa16.63■□□□□ 0.25
TSC22D3-210ENST00000502961 MYT1Q01538 1121 aa16.63■□□□□ 0.25
TSC22D3-210ENST00000502961 LTN1O94822 1766 aa16.63■□□□□ 0.25
TSC22D3-210ENST00000502961 SPATA31A1Q5TZJ5 1347 aa16.63■□□□□ 0.25
TSC22D3-210ENST00000502961 CDK12Q9NYV4 1490 aaPredicted RBP16.62■□□□□ 0.25
TSC22D3-210ENST00000502961 PER1O15534 1290 aaPredicted RBP16.62■□□□□ 0.25
TSC22D3-210ENST00000502961 TOM1L2Q6ZVM7 507 aa16.62■□□□□ 0.25
TSC22D3-210ENST00000502961 IP6K1Q92551 441 aa16.62■□□□□ 0.25
TSC22D3-210ENST00000502961 LTV1Q96GA3 475 aaPredicted RBP16.62■□□□□ 0.25
TSC22D3-210ENST00000502961 RGPD5Q99666 1765 aa16.61■□□□□ 0.25
TSC22D3-210ENST00000502961 HOXC9P31274 260 aa16.61■□□□□ 0.25
TSC22D3-210ENST00000502961 AMER1Q5JTC6 1135 aaPredicted RBP16.61■□□□□ 0.25
TSC22D3-210ENST00000502961 SEPT12Q8IYM1 358 aa16.61■□□□□ 0.25
TSC22D3-210ENST00000502961 EMILIN1Q9Y6C2 1016 aa16.61■□□□□ 0.25
TSC22D3-210ENST00000502961 CC2D1BQ5T0F9 858 aaKnown RBP16.6■□□□□ 0.25
TSC22D3-210ENST00000502961 MORC1Q86VD1 984 aa16.6■□□□□ 0.25
TSC22D3-210ENST00000502961 ANKRD24Q8TF21 1146 aa16.6■□□□□ 0.25
TSC22D3-210ENST00000502961 WDR17Q8IZU2 1322 aa16.6■□□□□ 0.25
TSC22D3-210ENST00000502961 CRB1P82279 1406 aa16.6■□□□□ 0.25
TSC22D3-210ENST00000502961 PPM1GO15355 546 aaPredicted RBP16.59■□□□□ 0.25
TSC22D3-210ENST00000502961 ONECUT3O60422 494 aaPredicted RBP16.58■□□□□ 0.24
TSC22D3-210ENST00000502961 TCP11L2Q8N4U5 519 aa16.58■□□□□ 0.24
TSC22D3-210ENST00000502961 NLRP2Q9NX02 1062 aa16.58■□□□□ 0.24
TSC22D3-210ENST00000502961 ERBB3P21860 1342 aa16.58■□□□□ 0.24
TSC22D3-210ENST00000502961 NSD2O96028 1365 aa16.58■□□□□ 0.24
TSC22D3-210ENST00000502961 ABCC6O95255 1503 aa16.58■□□□□ 0.24
TSC22D3-210ENST00000502961 HSP90AB2PQ58FF8 381 aa16.57■□□□□ 0.24
TSC22D3-210ENST00000502961 PEAK1Q9H792 1746 aa16.56■□□□□ 0.24
TSC22D3-210ENST00000502961 ANKRD26Q9UPS8 1709 aa16.56■□□□□ 0.24
TSC22D3-210ENST00000502961 BLMP54132 1417 aaPredicted RBP16.56■□□□□ 0.24
TSC22D3-210ENST00000502961 POLKQ9UBT6 870 aa16.56■□□□□ 0.24
TSC22D3-210ENST00000502961 RTL1A6NKG5 1358 aa16.55■□□□□ 0.24
TSC22D3-210ENST00000502961 BARGINQ6ZT62 677 aa16.55■□□□□ 0.24
TSC22D3-210ENST00000502961 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
TSC22D3-210ENST00000502961 FLT4P35916 1363 aa16.54■□□□□ 0.24
TSC22D3-210ENST00000502961 DDX10Q13206 875 aaKnown RBP16.54■□□□□ 0.24
TSC22D3-210ENST00000502961 FAM182BQ5T319 152 aa16.53■□□□□ 0.24
TSC22D3-210ENST00000502961 THRAP3Q9Y2W1 955 aaKnown RBP16.53■□□□□ 0.24
TSC22D3-210ENST00000502961 THSD7AQ9UPZ6 1657 aa16.53■□□□□ 0.24
TSC22D3-210ENST00000502961 KRT27Q7Z3Y8 459 aa16.52■□□□□ 0.24
TSC22D3-210ENST00000502961 BRWD3Q6RI45 1802 aa16.52■□□□□ 0.23
TSC22D3-210ENST00000502961 INSRP06213 1382 aa16.51■□□□□ 0.23
TSC22D3-210ENST00000502961 USHBP1Q8N6Y0 703 aa16.51■□□□□ 0.23
TSC22D3-210ENST00000502961 KIF24Q5T7B8 1368 aa16.51■□□□□ 0.23
TSC22D3-210ENST00000502961 MAP2P11137 1827 aaKnown RBP16.5■□□□□ 0.23
TSC22D3-210ENST00000502961 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
TSC22D3-210ENST00000502961 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
TSC22D3-210ENST00000502961 NPC1L1Q9UHC9 1359 aa16.5■□□□□ 0.23
TSC22D3-210ENST00000502961 SMG6Q86US8 1419 aaKnown RBP16.49■□□□□ 0.23
TSC22D3-210ENST00000502961 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
TSC22D3-210ENST00000502961 UPF1Q92900 1129 aaKnown RBP eCLIP16.48■□□□□ 0.23
TSC22D3-210ENST00000502961 DISP2A7MBM2 1401 aa16.47■□□□□ 0.23
TSC22D3-210ENST00000502961 RGPD2P0DJD1 1756 aa16.47■□□□□ 0.23
TSC22D3-210ENST00000502961 MTHFSP49914 203 aa16.47■□□□□ 0.23
TSC22D3-210ENST00000502961 DDB1Q16531 1140 aa16.47■□□□□ 0.23
TSC22D3-210ENST00000502961 IL2RBP14784 551 aa16.46■□□□□ 0.23
TSC22D3-210ENST00000502961 EIF4A2Q14240 407 aaKnown RBP16.46■□□□□ 0.23
TSC22D3-210ENST00000502961 CDCA7Q9BWT1 371 aaPredicted RBP16.46■□□□□ 0.23
TSC22D3-210ENST00000502961 WNK3Q9BYP7 1800 aa16.45■□□□□ 0.22
TSC22D3-210ENST00000502961 LRRC37A3O60309 1634 aa16.45■□□□□ 0.22
TSC22D3-210ENST00000502961 FAM208AQ9UK61 1670 aaKnown RBP16.44■□□□□ 0.22
TSC22D3-210ENST00000502961 EYA1Q99502 592 aa16.44■□□□□ 0.22
TSC22D3-210ENST00000502961 PARP4Q9UKK3 1724 aaKnown RBP16.44■□□□□ 0.22
TSC22D3-210ENST00000502961 EXOC5O00471 708 aa16.43■□□□□ 0.22
TSC22D3-210ENST00000502961 MEGF6O75095 1541 aa16.42■□□□□ 0.22
TSC22D3-210ENST00000502961 MARCH10Q8NA82 808 aaPredicted RBP16.42■□□□□ 0.22
TSC22D3-210ENST00000502961 PPP2R1AP30153 589 aa16.41■□□□□ 0.22
TSC22D3-210ENST00000502961 MIER1Q8N108 512 aa16.41■□□□□ 0.22
TSC22D3-210ENST00000502961 TNS2Q63HR2 1409 aa16.4■□□□□ 0.22
TSC22D3-210ENST00000502961 FAM196AQ6ZSG2 479 aa16.4■□□□□ 0.22
TSC22D3-210ENST00000502961 RAPGEF4Q8WZA2 1011 aa16.4■□□□□ 0.22
TSC22D3-210ENST00000502961 TATP17735 454 aaPredicted RBP16.39■□□□□ 0.21
TSC22D3-210ENST00000502961 IL13P35225 146 aa16.39■□□□□ 0.21
TSC22D3-210ENST00000502961 DDX54Q8TDD1 881 aaKnown RBP16.39■□□□□ 0.21
TSC22D3-210ENST00000502961 TRIM37O94972 964 aa16.38■□□□□ 0.21
TSC22D3-210ENST00000502961 OVOS2A0A0G2JMS6 1433 aa16.37■□□□□ 0.21
TSC22D3-210ENST00000502961 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
TSC22D3-210ENST00000502961 AEBP1Q8IUX7 1158 aa16.37■□□□□ 0.21
TSC22D3-210ENST00000502961 ZCRB1Q8TBF4 217 aaKnown RBP16.37■□□□□ 0.21
TSC22D3-210ENST00000502961 IGSF1Q8N6C5 1336 aa16.37■□□□□ 0.21
TSC22D3-210ENST00000502961 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
TSC22D3-210ENST00000502961 NCAPD2Q15021 1401 aa16.36■□□□□ 0.21
TSC22D3-210ENST00000502961 SULT6B1Q6IMI4 303 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms