RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CAMTA1Q9Y6Y1 1673 aa14.78□□□□□ -0.04
UBE2D3-212ENST00000502563 COL5A2P05997 1499 aaPredicted RBP14.78□□□□□ -0.04
UBE2D3-212ENST00000502563 RTL1A6NKG5 1358 aa14.78□□□□□ -0.04
UBE2D3-212ENST00000502563 RXRBP28702 533 aa14.78□□□□□ -0.04
UBE2D3-212ENST00000502563 PANK3Q9H999 370 aa14.78□□□□□ -0.04
UBE2D3-212ENST00000502563 BTG4Q9NY30 223 aa14.78□□□□□ -0.04
UBE2D3-212ENST00000502563 BLMP54132 1417 aaPredicted RBP14.77□□□□□ -0.04
UBE2D3-212ENST00000502563 ONECUT3O60422 494 aaPredicted RBP14.77□□□□□ -0.05
UBE2D3-212ENST00000502563 ZC3H6P61129 1189 aaKnown RBP14.77□□□□□ -0.05
UBE2D3-212ENST00000502563 GJD4Q96KN9 370 aaPredicted RBP14.77□□□□□ -0.05
UBE2D3-212ENST00000502563 PER1O15534 1290 aaPredicted RBP14.76□□□□□ -0.05
UBE2D3-212ENST00000502563 GLI3P10071 1580 aa14.76□□□□□ -0.05
UBE2D3-212ENST00000502563 SPATA31A5Q5VU36 1347 aa14.74□□□□□ -0.05
UBE2D3-212ENST00000502563 SPATA31A7Q8IWB4 1347 aa14.74□□□□□ -0.05
UBE2D3-212ENST00000502563 ZRANB1Q9UGI0 708 aa14.74□□□□□ -0.05
UBE2D3-212ENST00000502563 THRAP3Q9Y2W1 955 aaKnown RBP14.74□□□□□ -0.05
UBE2D3-212ENST00000502563 LTN1O94822 1766 aa14.74□□□□□ -0.05
UBE2D3-212ENST00000502563 AMER1Q5JTC6 1135 aaPredicted RBP14.73□□□□□ -0.05
UBE2D3-212ENST00000502563 KNSTRNQ9Y448 316 aa14.73□□□□□ -0.05
UBE2D3-212ENST00000502563 CRB1P82279 1406 aa14.73□□□□□ -0.05
UBE2D3-212ENST00000502563 SPATA31A1Q5TZJ5 1347 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 WDR17Q8IZU2 1322 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 FAM208AQ9UK61 1670 aaKnown RBP14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 CHRNA2Q15822 529 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 BARGINQ6ZT62 677 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 ILDR2Q71H61 639 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 IP6K1Q92551 441 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 POLR3GLQ9BT43 218 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 GGNBP2Q9H3C7 697 aa14.72□□□□□ -0.05
UBE2D3-212ENST00000502563 ERBB3P21860 1342 aa14.71□□□□□ -0.05
UBE2D3-212ENST00000502563 RGS12O14924 1447 aa14.71□□□□□ -0.05
UBE2D3-212ENST00000502563 SMG6Q86US8 1419 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-212ENST00000502563 THSD7AQ9UPZ6 1657 aa14.71□□□□□ -0.06
UBE2D3-212ENST00000502563 MAP3K19Q56UN5 1328 aa14.7□□□□□ -0.06
UBE2D3-212ENST00000502563 AXIN2Q9Y2T1 843 aa14.7□□□□□ -0.06
UBE2D3-212ENST00000502563 FLT4P35916 1363 aa14.7□□□□□ -0.06
UBE2D3-212ENST00000502563 PLEKHG5O94827 1062 aa14.68□□□□□ -0.06
UBE2D3-212ENST00000502563 EVA1CP58658 441 aa14.68□□□□□ -0.06
UBE2D3-212ENST00000502563 CDCA7Q9BWT1 371 aaPredicted RBP14.68□□□□□ -0.06
UBE2D3-212ENST00000502563 CARD10Q9BWT7 1032 aa14.68□□□□□ -0.06
UBE2D3-212ENST00000502563 INSRP06213 1382 aa14.68□□□□□ -0.06
UBE2D3-212ENST00000502563 PLEKHG2Q9H7P9 1386 aa14.68□□□□□ -0.06
UBE2D3-212ENST00000502563 HOXC9P31274 260 aa14.67□□□□□ -0.06
UBE2D3-212ENST00000502563 LARP1Q6PKG0 1096 aaKnown RBP14.67□□□□□ -0.06
UBE2D3-212ENST00000502563 TCP11L2Q8N4U5 519 aa14.67□□□□□ -0.06
UBE2D3-212ENST00000502563 RGPD5Q99666 1765 aa14.66□□□□□ -0.06
UBE2D3-212ENST00000502563 AMPHP49418 695 aa14.65□□□□□ -0.06
UBE2D3-212ENST00000502563 STRN4Q9NRL3 753 aa14.65□□□□□ -0.06
UBE2D3-212ENST00000502563 PARP4Q9UKK3 1724 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-212ENST00000502563 DISP2A7MBM2 1401 aa14.65□□□□□ -0.06
UBE2D3-212ENST00000502563 NCAPD2Q15021 1401 aa14.65□□□□□ -0.06
UBE2D3-212ENST00000502563 MAP2P11137 1827 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-212ENST00000502563 PEAK1Q9H792 1746 aa14.64□□□□□ -0.07
UBE2D3-212ENST00000502563 SOCS7O14512 581 aa14.64□□□□□ -0.07
UBE2D3-212ENST00000502563 SOX12O15370 315 aa14.64□□□□□ -0.07
UBE2D3-212ENST00000502563 NPM3O75607 178 aaKnown RBP14.64□□□□□ -0.07
UBE2D3-212ENST00000502563 POLKQ9UBT6 870 aa14.64□□□□□ -0.07
UBE2D3-212ENST00000502563 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
UBE2D3-212ENST00000502563 RRS1Q15050 365 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-212ENST00000502563 TOM1L2Q6ZVM7 507 aa14.63□□□□□ -0.07
UBE2D3-212ENST00000502563 MORC1Q86VD1 984 aa14.63□□□□□ -0.07
UBE2D3-212ENST00000502563 ANKRD24Q8TF21 1146 aa14.63□□□□□ -0.07
UBE2D3-212ENST00000502563 CCDC9Q9Y3X0 531 aaKnown RBP14.63□□□□□ -0.07
UBE2D3-212ENST00000502563 BCL9O00512 1426 aa14.62□□□□□ -0.07
UBE2D3-212ENST00000502563 SEPT12Q8IYM1 358 aa14.62□□□□□ -0.07
UBE2D3-212ENST00000502563 FAM98CQ17RN3 349 aaKnown RBP14.61□□□□□ -0.07
UBE2D3-212ENST00000502563 CSB-PGBD3P0DP91 1061 aa14.6□□□□□ -0.07
UBE2D3-212ENST00000502563 EMILIN1Q9Y6C2 1016 aa14.6□□□□□ -0.07
UBE2D3-212ENST00000502563 ZBTB7CA1YPR0 619 aa14.59□□□□□ -0.07
UBE2D3-212ENST00000502563 FBLN1P23142 703 aa14.59□□□□□ -0.07
UBE2D3-212ENST00000502563 HSP90AB2PQ58FF8 381 aa14.59□□□□□ -0.07
UBE2D3-212ENST00000502563 BRWD3Q6RI45 1802 aa14.59□□□□□ -0.07
UBE2D3-212ENST00000502563 LRRC37A3O60309 1634 aa14.59□□□□□ -0.07
UBE2D3-212ENST00000502563 KRT27Q7Z3Y8 459 aa14.58□□□□□ -0.08
UBE2D3-212ENST00000502563 CCDC125Q86Z20 511 aa14.58□□□□□ -0.08
UBE2D3-212ENST00000502563 TNS2Q63HR2 1409 aa14.58□□□□□ -0.08
UBE2D3-212ENST00000502563 PARD3Q8TEW0 1356 aa14.57□□□□□ -0.08
UBE2D3-212ENST00000502563 IL2RBP14784 551 aa14.56□□□□□ -0.08
UBE2D3-212ENST00000502563 NLRP2Q9NX02 1062 aa14.56□□□□□ -0.08
UBE2D3-212ENST00000502563 USP35Q9P2H5 1018 aa14.56□□□□□ -0.08
UBE2D3-212ENST00000502563 IGSF1Q8N6C5 1336 aa14.55□□□□□ -0.08
UBE2D3-212ENST00000502563 EP400Q96L91 3159 aa14.55□□□□□ -0.08
UBE2D3-212ENST00000502563 OVOS2A0A0G2JMS6 1433 aa14.55□□□□□ -0.08
UBE2D3-212ENST00000502563 DDB1Q16531 1140 aa14.54□□□□□ -0.08
UBE2D3-212ENST00000502563 CC2D1BQ5T0F9 858 aaKnown RBP14.54□□□□□ -0.08
UBE2D3-212ENST00000502563 NBPF6Q5VWK0 638 aa14.54□□□□□ -0.08
UBE2D3-212ENST00000502563 NBPF4Q96M43 638 aa14.54□□□□□ -0.08
UBE2D3-212ENST00000502563 RGPD1P0DJD0 1748 aa14.53□□□□□ -0.08
UBE2D3-212ENST00000502563 KDRP35968 1356 aa14.53□□□□□ -0.08
UBE2D3-212ENST00000502563 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
UBE2D3-212ENST00000502563 EIF4A2Q14240 407 aaKnown RBP14.53□□□□□ -0.08
UBE2D3-212ENST00000502563 FAM196AQ6ZSG2 479 aa14.53□□□□□ -0.08
UBE2D3-212ENST00000502563 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.53□□□□□ -0.08
UBE2D3-212ENST00000502563 COL3A1P02461 1466 aaPredicted RBP14.52□□□□□ -0.08
UBE2D3-212ENST00000502563 EXOC5O00471 708 aa14.52□□□□□ -0.09
UBE2D3-212ENST00000502563 TNNT2P45379 298 aaPredicted RBP14.52□□□□□ -0.09
UBE2D3-212ENST00000502563 MTHFSP49914 203 aa14.52□□□□□ -0.09
UBE2D3-212ENST00000502563 PDE3BQ13370 1112 aa14.52□□□□□ -0.09
UBE2D3-212ENST00000502563 RALBP1Q15311 655 aa14.52□□□□□ -0.09
UBE2D3-212ENST00000502563 UPF1Q92900 1129 aaKnown RBP eCLIP14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms