RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 KIF3CO14782 793 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 GPR37L1O60883 481 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 MTMR3Q13615 1198 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 GNL2Q13823 731 aaKnown RBP4.93□□□□□ -1.62
SUB1-202ENST00000502453 ATMINO43313 823 aaPredicted RBP4.93□□□□□ -1.62
SUB1-202ENST00000502453 CTDSPL2Q05D32 466 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 PLEKHG6Q3KR16 790 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 RSBN1LQ6PCB5 846 aaPredicted RBP4.93□□□□□ -1.62
SUB1-202ENST00000502453 TSHZ1Q6ZSZ6 1077 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 NME8Q8N427 588 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 EPS8L1Q8TE68 723 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 IRF2BPLQ9H1B7 796 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 PCDH12Q9NPG4 1184 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 LMOD3Q0VAK6 560 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 LRRN4Q8WUT4 740 aa4.93□□□□□ -1.62
SUB1-202ENST00000502453 ZSCAN29Q8IWY8 852 aaPredicted RBP4.92□□□□□ -1.62
SUB1-202ENST00000502453 RPS6KC1Q96S38 1066 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 LGR5O75473 907 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 FAM200AQ8TCP9 573 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 USP17L3A6NCW0 530 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 USP17L4A6NCW7 530 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 RASA1P20936 1047 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 XPCQ01831 940 aaPredicted RBP4.92□□□□□ -1.62
SUB1-202ENST00000502453 WDR78Q5VTH9 848 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 USP17L2Q6R6M4 530 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 USP17L1Q7RTZ2 530 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 OSBPL2Q9H1P3 480 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 NPDC1Q9NQX5 325 aaPredicted RBP4.92□□□□□ -1.62
SUB1-202ENST00000502453 WWC3Q9ULE0 1092 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 PRMT3O60678 531 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 DEKP35659 375 aaKnown RBP4.92□□□□□ -1.62
SUB1-202ENST00000502453 RHBDL3P58872 404 aa4.92□□□□□ -1.62
SUB1-202ENST00000502453 SKIP12755 728 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 TBX4P57082 545 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 SPTLC1O15269 473 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 LILRB3O75022 631 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 FOXK1P85037 733 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 HELBQ8NG08 1087 aaPredicted RBP4.91□□□□□ -1.62
SUB1-202ENST00000502453 CCDC189A1A4V9 331 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L15C9J2P7 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L10C9JJH3 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L13C9JLJ4 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L12C9JPN9 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L11C9JVI0 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L21D6R901 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L18D6R9N7 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L22D6RA61 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L17D6RBQ6 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L19D6RCP7 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L20D6RJB6 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 USP17L24Q0WX57 530 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 ELOAQ14241 798 aaKnown RBP4.91□□□□□ -1.62
SUB1-202ENST00000502453 WDR75Q8IWA0 830 aaKnown RBP4.91□□□□□ -1.62
SUB1-202ENST00000502453 RNF34Q969K3 372 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 ZNF594Q96JF6 807 aaPredicted RBP4.91□□□□□ -1.62
SUB1-202ENST00000502453 ASB16Q96NS5 453 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 TCEAL9Q9UHQ7 104 aa4.91□□□□□ -1.62
SUB1-202ENST00000502453 EIF3JO75822 258 aaKnown RBP4.9□□□□□ -1.62
SUB1-202ENST00000502453 PDE3BQ13370 1112 aa4.9□□□□□ -1.62
SUB1-202ENST00000502453 METTL16Q86W50 562 aaKnown RBP4.9□□□□□ -1.62
SUB1-202ENST00000502453 PRPF38AQ8NAV1 312 aaKnown RBP4.9□□□□□ -1.62
SUB1-202ENST00000502453 TMEM121BQ9BXQ6 578 aaPredicted RBP4.9□□□□□ -1.62
SUB1-202ENST00000502453 LARP1Q6PKG0 1096 aaKnown RBP4.9□□□□□ -1.62
SUB1-202ENST00000502453 RNF19AQ9NV58 838 aa4.9□□□□□ -1.62
SUB1-202ENST00000502453 VTI1BQ9UEU0 232 aa4.9□□□□□ -1.62
SUB1-202ENST00000502453 MKRN1Q9UHC7 482 aaKnown RBP4.9□□□□□ -1.62
SUB1-202ENST00000502453 INPP5FQ9Y2H2 1132 aa4.9□□□□□ -1.62
SUB1-202ENST00000502453 PPP1R3GB7ZBB8 358 aa4.9□□□□□ -1.63
SUB1-202ENST00000502453 MRPL58Q14197 206 aaKnown RBP4.9□□□□□ -1.63
SUB1-202ENST00000502453 ASTLQ6HA08 431 aaPredicted RBP4.9□□□□□ -1.63
SUB1-202ENST00000502453 C11orf96Q7Z7L8 435 aa4.9□□□□□ -1.63
SUB1-202ENST00000502453 MPHOSPH6Q99547 160 aaKnown RBP4.9□□□□□ -1.63
SUB1-202ENST00000502453 DCTN4Q9UJW0 460 aa4.9□□□□□ -1.63
SUB1-202ENST00000502453 CCER2I3L3R5 266 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 MKNK1Q9BUB5 465 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 DDX56Q9NY93 547 aaKnown RBP4.89□□□□□ -1.63
SUB1-202ENST00000502453 PCDHGB7Q9Y5F8 929 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 APLP1P51693 650 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 ZNF746Q6NUN9 644 aaPredicted RBP4.89□□□□□ -1.63
SUB1-202ENST00000502453 KRBA2Q6ZNG9 492 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 TMC1Q8TDI8 760 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 USP17L5A8MUK1 530 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 SOCS7O14512 581 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 DNAJC6O75061 913 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 STK10O94804 968 aaKnown RBP4.89□□□□□ -1.63
SUB1-202ENST00000502453 OATP04181 439 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 P4HBP07237 508 aaKnown RBP4.89□□□□□ -1.63
SUB1-202ENST00000502453 SOX11P35716 441 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 ARID5AQ03989 594 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 LDLRAD1Q5T700 205 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 RPUSD2Q8IZ73 545 aaKnown RBP4.89□□□□□ -1.63
SUB1-202ENST00000502453 PRIMPOLQ96LW4 560 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 BOLA1Q9Y3E2 137 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 MAPK8P45983 427 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 ODR4Q5SWX8 454 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 STAG1Q8WVM7 1258 aa4.89□□□□□ -1.63
SUB1-202ENST00000502453 POTEIP0CG38 1075 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 HSD3B2P26439 372 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 ZNF76P36508 570 aa4.88□□□□□ -1.63
SUB1-202ENST00000502453 EIF4G2P78344 907 aaKnown RBP eCLIP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms