RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 RGS12O14924 1447 aa22.14■■□□□ 1.14
LMNA-217ENST00000498722 FYB1O15117 783 aa22.14■■□□□ 1.14
LMNA-217ENST00000498722 AATKQ6ZMQ8 1374 aa22.14■■□□□ 1.13
LMNA-217ENST00000498722 ARHGEF25Q86VW2 580 aa22.13■■□□□ 1.13
LMNA-217ENST00000498722 CGNL1Q0VF96 1302 aa22.13■■□□□ 1.13
LMNA-217ENST00000498722 A0A0G2JS52 829 aa22.12■■□□□ 1.13
LMNA-217ENST00000498722 MYT1Q01538 1121 aa22.12■■□□□ 1.13
LMNA-217ENST00000498722 MAP2P11137 1827 aaKnown RBP22.12■■□□□ 1.13
LMNA-217ENST00000498722 COL5A2P05997 1499 aaPredicted RBP22.12■■□□□ 1.13
LMNA-217ENST00000498722 CCDC7Q96M83 1385 aa22.11■■□□□ 1.13
LMNA-217ENST00000498722 DDX10Q13206 875 aaKnown RBP22.1■■□□□ 1.13
LMNA-217ENST00000498722 USP35Q9P2H5 1018 aa22.1■■□□□ 1.13
LMNA-217ENST00000498722 ABCC6O95255 1503 aa22.09■■□□□ 1.13
LMNA-217ENST00000498722 SPATA31A5Q5VU36 1347 aa22.08■■□□□ 1.13
LMNA-217ENST00000498722 WASHC2AQ641Q2 1341 aa22.08■■□□□ 1.13
LMNA-217ENST00000498722 LARP1Q6PKG0 1096 aaKnown RBP22.08■■□□□ 1.13
LMNA-217ENST00000498722 SPATA31A7Q8IWB4 1347 aa22.08■■□□□ 1.13
LMNA-217ENST00000498722 CSB-PGBD3P0DP91 1061 aa22.07■■□□□ 1.12
LMNA-217ENST00000498722 FAM98CQ17RN3 349 aaKnown RBP22.07■■□□□ 1.12
LMNA-217ENST00000498722 MIER1Q8N108 512 aa22.07■■□□□ 1.12
LMNA-217ENST00000498722 AXIN2Q9Y2T1 843 aa22.07■■□□□ 1.12
LMNA-217ENST00000498722 FBLN1P23142 703 aa22.06■■□□□ 1.12
LMNA-217ENST00000498722 WNK3Q9BYP7 1800 aa22.06■■□□□ 1.12
LMNA-217ENST00000498722 SPATA31A1Q5TZJ5 1347 aa22.06■■□□□ 1.12
LMNA-217ENST00000498722 KNSTRNQ9Y448 316 aa22.06■■□□□ 1.12
LMNA-217ENST00000498722 AMPHP49418 695 aa22.05■■□□□ 1.12
LMNA-217ENST00000498722 TOM1L2Q6ZVM7 507 aa22.05■■□□□ 1.12
LMNA-217ENST00000498722 CRB1P82279 1406 aa22.04■■□□□ 1.12
LMNA-217ENST00000498722 RRS1Q15050 365 aaKnown RBP22.04■■□□□ 1.12
LMNA-217ENST00000498722 RGPD2P0DJD1 1756 aa22.04■■□□□ 1.12
LMNA-217ENST00000498722 MAP3K19Q56UN5 1328 aa22.03■■□□□ 1.12
LMNA-217ENST00000498722 SEPT12Q8IYM1 358 aa22.03■■□□□ 1.12
LMNA-217ENST00000498722 FAM208AQ9UK61 1670 aaKnown RBP22.03■■□□□ 1.12
LMNA-217ENST00000498722 WDR17Q8IZU2 1322 aa22.02■■□□□ 1.12
LMNA-217ENST00000498722 THSD7AQ9UPZ6 1657 aa22.02■■□□□ 1.12
LMNA-217ENST00000498722 TNNT2P45379 298 aaPredicted RBP22.02■■□□□ 1.12
LMNA-217ENST00000498722 TCP11L2Q8N4U5 519 aa22.01■■□□□ 1.11
LMNA-217ENST00000498722 PEAK1Q9H792 1746 aa22.01■■□□□ 1.11
LMNA-217ENST00000498722 BLMP54132 1417 aaPredicted RBP22■■□□□ 1.11
LMNA-217ENST00000498722 IP6K1Q92551 441 aa22■■□□□ 1.11
LMNA-217ENST00000498722 LTV1Q96GA3 475 aaPredicted RBP22■■□□□ 1.11
LMNA-217ENST00000498722 NSD2O96028 1365 aa21.99■■□□□ 1.11
LMNA-217ENST00000498722 PPM1GO15355 546 aaPredicted RBP21.99■■□□□ 1.11
LMNA-217ENST00000498722 ANKRD24Q8TF21 1146 aa21.99■■□□□ 1.11
LMNA-217ENST00000498722 HOXC9P31274 260 aa21.98■■□□□ 1.11
LMNA-217ENST00000498722 NLRP2Q9NX02 1062 aa21.98■■□□□ 1.11
LMNA-217ENST00000498722 RTL1A6NKG5 1358 aa21.98■■□□□ 1.11
LMNA-217ENST00000498722 ERBB3P21860 1342 aa21.97■■□□□ 1.11
LMNA-217ENST00000498722 PARP4Q9UKK3 1724 aaKnown RBP21.97■■□□□ 1.11
LMNA-217ENST00000498722 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
LMNA-217ENST00000498722 CNGB1Q14028 1251 aaPredicted RBP21.96■■□□□ 1.11
LMNA-217ENST00000498722 BARGINQ6ZT62 677 aa21.96■■□□□ 1.11
LMNA-217ENST00000498722 MORC1Q86VD1 984 aa21.96■■□□□ 1.11
LMNA-217ENST00000498722 THRAP3Q9Y2W1 955 aaKnown RBP21.96■■□□□ 1.11
LMNA-217ENST00000498722 KRT27Q7Z3Y8 459 aa21.95■■□□□ 1.1
LMNA-217ENST00000498722 EMILIN1Q9Y6C2 1016 aa21.95■■□□□ 1.1
LMNA-217ENST00000498722 FLT4P35916 1363 aa21.94■■□□□ 1.1
LMNA-217ENST00000498722 ANP32CO43423 234 aa21.94■■□□□ 1.1
LMNA-217ENST00000498722 SMG6Q86US8 1419 aaKnown RBP21.94■■□□□ 1.1
LMNA-217ENST00000498722 CC2D1BQ5T0F9 858 aaKnown RBP21.93■■□□□ 1.1
LMNA-217ENST00000498722 CARD10Q9BWT7 1032 aa21.93■■□□□ 1.1
LMNA-217ENST00000498722 LRRC37A3O60309 1634 aa21.93■■□□□ 1.1
LMNA-217ENST00000498722 AMER1Q5JTC6 1135 aaPredicted RBP21.92■■□□□ 1.1
LMNA-217ENST00000498722 EP400Q96L91 3159 aa21.91■■□□□ 1.1
LMNA-217ENST00000498722 KIF24Q5T7B8 1368 aa21.91■■□□□ 1.1
LMNA-217ENST00000498722 PER1O15534 1290 aaPredicted RBP21.9■■□□□ 1.1
LMNA-217ENST00000498722 HSP90AB2PQ58FF8 381 aa21.9■■□□□ 1.1
LMNA-217ENST00000498722 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.1
LMNA-217ENST00000498722 PDE3BQ13370 1112 aa21.89■■□□□ 1.1
LMNA-217ENST00000498722 INSRP06213 1382 aa21.89■■□□□ 1.09
LMNA-217ENST00000498722 FAM182BQ5T319 152 aa21.88■■□□□ 1.09
LMNA-217ENST00000498722 POLKQ9UBT6 870 aa21.88■■□□□ 1.09
LMNA-217ENST00000498722 UPF1Q92900 1129 aaKnown RBP eCLIP21.87■■□□□ 1.09
LMNA-217ENST00000498722 CDCA7Q9BWT1 371 aaPredicted RBP21.87■■□□□ 1.09
LMNA-217ENST00000498722 DDB1Q16531 1140 aa21.85■■□□□ 1.09
LMNA-217ENST00000498722 RGPD1P0DJD0 1748 aa21.84■■□□□ 1.09
LMNA-217ENST00000498722 DISP2A7MBM2 1401 aa21.83■■□□□ 1.09
LMNA-217ENST00000498722 IL2RBP14784 551 aa21.83■■□□□ 1.09
LMNA-217ENST00000498722 CCER2I3L3R5 266 aa21.82■■□□□ 1.08
LMNA-217ENST00000498722 USHBP1Q8N6Y0 703 aa21.82■■□□□ 1.08
LMNA-217ENST00000498722 SBF2Q86WG5 1849 aa21.82■■□□□ 1.08
LMNA-217ENST00000498722 NPC1L1Q9UHC9 1359 aa21.82■■□□□ 1.08
LMNA-217ENST00000498722 NBPF6Q5VWK0 638 aa21.81■■□□□ 1.08
LMNA-217ENST00000498722 NBPF4Q96M43 638 aa21.81■■□□□ 1.08
LMNA-217ENST00000498722 EXOC5O00471 708 aa21.8■■□□□ 1.08
LMNA-217ENST00000498722 TNS2Q63HR2 1409 aa21.79■■□□□ 1.08
LMNA-217ENST00000498722 SF3B2Q13435 895 aaKnown RBP21.79■■□□□ 1.08
LMNA-217ENST00000498722 FAM196AQ6ZSG2 479 aa21.79■■□□□ 1.08
LMNA-217ENST00000498722 TNS1Q9HBL0 1735 aaKnown RBP21.78■■□□□ 1.08
LMNA-217ENST00000498722 OVOS2A0A0G2JMS6 1433 aa21.77■■□□□ 1.08
LMNA-217ENST00000498722 EIF4A2Q14240 407 aaKnown RBP21.77■■□□□ 1.07
LMNA-217ENST00000498722 RAPGEF4Q8WZA2 1011 aa21.77■■□□□ 1.07
LMNA-217ENST00000498722 SHANK3Q9BYB0 1731 aa21.76■■□□□ 1.07
LMNA-217ENST00000498722 MEGF6O75095 1541 aa21.76■■□□□ 1.07
LMNA-217ENST00000498722 MTHFSP49914 203 aa21.76■■□□□ 1.07
LMNA-217ENST00000498722 CCDC125Q86Z20 511 aa21.76■■□□□ 1.07
LMNA-217ENST00000498722 MARCH10Q8NA82 808 aaPredicted RBP21.74■■□□□ 1.07
LMNA-217ENST00000498722 TRIM37O94972 964 aa21.73■■□□□ 1.07
LMNA-217ENST00000498722 TATP17735 454 aaPredicted RBP21.73■■□□□ 1.07
LMNA-217ENST00000498722 EYA1Q99502 592 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms