RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 COL14A1Q05707 1796 aaKnown RBP17.23■□□□□ 0.35
TMEM39B-209ENST00000498613 TOM1L2Q6ZVM7 507 aa17.23■□□□□ 0.35
TMEM39B-209ENST00000498613 GJD4Q96KN9 370 aaPredicted RBP17.23■□□□□ 0.35
TMEM39B-209ENST00000498613 KIF24Q5T7B8 1368 aa17.23■□□□□ 0.35
TMEM39B-209ENST00000498613 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
TMEM39B-209ENST00000498613 MARF1Q9Y4F3 1742 aaKnown RBP17.22■□□□□ 0.35
TMEM39B-209ENST00000498613 KIF20BQ96Q89 1820 aa17.22■□□□□ 0.35
TMEM39B-209ENST00000498613 SLIT2O94813 1529 aa17.21■□□□□ 0.35
TMEM39B-209ENST00000498613 PHRF1Q9P1Y6 1649 aaKnown RBP17.21■□□□□ 0.35
TMEM39B-209ENST00000498613 FBLN1P23142 703 aa17.21■□□□□ 0.35
TMEM39B-209ENST00000498613 HOXC9P31274 260 aa17.21■□□□□ 0.35
TMEM39B-209ENST00000498613 AXIN2Q9Y2T1 843 aa17.21■□□□□ 0.35
TMEM39B-209ENST00000498613 BCL9LQ86UU0 1499 aa17.2■□□□□ 0.34
TMEM39B-209ENST00000498613 RALBP1Q15311 655 aa17.2■□□□□ 0.34
TMEM39B-209ENST00000498613 LTV1Q96GA3 475 aaPredicted RBP17.2■□□□□ 0.34
TMEM39B-209ENST00000498613 NLRP2Q9NX02 1062 aa17.2■□□□□ 0.34
TMEM39B-209ENST00000498613 POLKQ9UBT6 870 aa17.2■□□□□ 0.34
TMEM39B-209ENST00000498613 ATRNO75882 1429 aa17.2■□□□□ 0.34
TMEM39B-209ENST00000498613 ABCA3Q99758 1704 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 RTL1A6NKG5 1358 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 A0A0G2JS52 829 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 MYT1Q01538 1121 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 ANKRD24Q8TF21 1146 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 CFAP53Q96M91 514 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 USP35Q9P2H5 1018 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 THRAP3Q9Y2W1 955 aaKnown RBP17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 BLMP54132 1417 aaPredicted RBP17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 USP54Q70EL1 1684 aa17.19■□□□□ 0.34
TMEM39B-209ENST00000498613 FLT4P35916 1363 aa17.18■□□□□ 0.34
TMEM39B-209ENST00000498613 LARP1Q6PKG0 1096 aaKnown RBP17.18■□□□□ 0.34
TMEM39B-209ENST00000498613 EMILIN1Q9Y6C2 1016 aa17.18■□□□□ 0.34
TMEM39B-209ENST00000498613 SMG6Q86US8 1419 aaKnown RBP17.18■□□□□ 0.34
TMEM39B-209ENST00000498613 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
TMEM39B-209ENST00000498613 WDR17Q8IZU2 1322 aa17.18■□□□□ 0.34
TMEM39B-209ENST00000498613 NFAT5O94916 1531 aa17.17■□□□□ 0.34
TMEM39B-209ENST00000498613 TCP11L2Q8N4U5 519 aa17.17■□□□□ 0.34
TMEM39B-209ENST00000498613 CDCA7Q9BWT1 371 aaPredicted RBP17.17■□□□□ 0.34
TMEM39B-209ENST00000498613 SPATA31A5Q5VU36 1347 aa17.17■□□□□ 0.34
TMEM39B-209ENST00000498613 SPATA31A7Q8IWB4 1347 aa17.17■□□□□ 0.34
TMEM39B-209ENST00000498613 NWD2Q9ULI1 1742 aa17.16■□□□□ 0.34
TMEM39B-209ENST00000498613 MTHFSP49914 203 aa17.16■□□□□ 0.34
TMEM39B-209ENST00000498613 HSP90AB2PQ58FF8 381 aa17.16■□□□□ 0.34
TMEM39B-209ENST00000498613 CARD10Q9BWT7 1032 aa17.16■□□□□ 0.34
TMEM39B-209ENST00000498613 ABCC6O95255 1503 aa17.16■□□□□ 0.34
TMEM39B-209ENST00000498613 INSRP06213 1382 aa17.15■□□□□ 0.34
TMEM39B-209ENST00000498613 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
TMEM39B-209ENST00000498613 ERBB3P21860 1342 aa17.15■□□□□ 0.34
TMEM39B-209ENST00000498613 SPATA31A1Q5TZJ5 1347 aa17.15■□□□□ 0.34
TMEM39B-209ENST00000498613 CRB1P82279 1406 aa17.13■□□□□ 0.33
TMEM39B-209ENST00000498613 ANP32CO43423 234 aa17.13■□□□□ 0.33
TMEM39B-209ENST00000498613 BARGINQ6ZT62 677 aa17.13■□□□□ 0.33
TMEM39B-209ENST00000498613 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.13■□□□□ 0.33
TMEM39B-209ENST00000498613 COL5A2P05997 1499 aaPredicted RBP17.12■□□□□ 0.33
TMEM39B-209ENST00000498613 FAM98CQ17RN3 349 aaKnown RBP17.12■□□□□ 0.33
TMEM39B-209ENST00000498613 NUDCQ9Y266 331 aa17.12■□□□□ 0.33
TMEM39B-209ENST00000498613 PLCH1Q4KWH8 1693 aa17.12■□□□□ 0.33
TMEM39B-209ENST00000498613 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
TMEM39B-209ENST00000498613 MAP2P11137 1827 aaKnown RBP17.12■□□□□ 0.33
TMEM39B-209ENST00000498613 LTN1O94822 1766 aa17.11■□□□□ 0.33
TMEM39B-209ENST00000498613 ONECUT3O60422 494 aaPredicted RBP17.11■□□□□ 0.33
TMEM39B-209ENST00000498613 PPP2R1AP30153 589 aa17.11■□□□□ 0.33
TMEM39B-209ENST00000498613 DIAPH1O60610 1272 aaKnown RBP17.1■□□□□ 0.33
TMEM39B-209ENST00000498613 PDE3BQ13370 1112 aa17.1■□□□□ 0.33
TMEM39B-209ENST00000498613 SEPT12Q8IYM1 358 aa17.1■□□□□ 0.33
TMEM39B-209ENST00000498613 RAPGEF4Q8WZA2 1011 aa17.1■□□□□ 0.33
TMEM39B-209ENST00000498613 EXOC5O00471 708 aa17.09■□□□□ 0.33
TMEM39B-209ENST00000498613 CCDC125Q86Z20 511 aa17.09■□□□□ 0.33
TMEM39B-209ENST00000498613 BRWD3Q6RI45 1802 aa17.08■□□□□ 0.33
TMEM39B-209ENST00000498613 COL18A1P39060 1754 aa17.08■□□□□ 0.33
TMEM39B-209ENST00000498613 LMO7Q8WWI1 1683 aa17.08■□□□□ 0.32
TMEM39B-209ENST00000498613 IL2RBP14784 551 aa17.08■□□□□ 0.32
TMEM39B-209ENST00000498613 GLI3P10071 1580 aa17.07■□□□□ 0.32
TMEM39B-209ENST00000498613 EIF4A2Q14240 407 aaKnown RBP17.07■□□□□ 0.32
TMEM39B-209ENST00000498613 NBPF6Q5VWK0 638 aa17.07■□□□□ 0.32
TMEM39B-209ENST00000498613 NBPF4Q96M43 638 aa17.07■□□□□ 0.32
TMEM39B-209ENST00000498613 PARD3Q8TEW0 1356 aa17.06■□□□□ 0.32
TMEM39B-209ENST00000498613 MYBBP1AQ9BQG0 1328 aaKnown RBP17.06■□□□□ 0.32
TMEM39B-209ENST00000498613 TATP17735 454 aaPredicted RBP17.06■□□□□ 0.32
TMEM39B-209ENST00000498613 DDB1Q16531 1140 aa17.06■□□□□ 0.32
TMEM39B-209ENST00000498613 PRKRIP1Q9H875 184 aaPredicted RBP17.06■□□□□ 0.32
TMEM39B-209ENST00000498613 U2SURPO15042 1029 aaKnown RBP17.04■□□□□ 0.32
TMEM39B-209ENST00000498613 KRT27Q7Z3Y8 459 aa17.04■□□□□ 0.32
TMEM39B-209ENST00000498613 EYA1Q99502 592 aa17.04■□□□□ 0.32
TMEM39B-209ENST00000498613 RGPD5Q99666 1765 aa17.04■□□□□ 0.32
TMEM39B-209ENST00000498613 NEFMP07197 916 aa17.03■□□□□ 0.32
TMEM39B-209ENST00000498613 IL13P35225 146 aa17.03■□□□□ 0.32
TMEM39B-209ENST00000498613 PNNQ9H307 717 aaKnown RBP17.03■□□□□ 0.32
TMEM39B-209ENST00000498613 NRAPQ86VF7 1730 aa17.03■□□□□ 0.32
TMEM39B-209ENST00000498613 LRP5O75197 1615 aa17.03■□□□□ 0.32
TMEM39B-209ENST00000498613 SPG7Q9UQ90 795 aa17.02■□□□□ 0.32
TMEM39B-209ENST00000498613 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
TMEM39B-209ENST00000498613 ZCRB1Q8TBF4 217 aaKnown RBP17.01■□□□□ 0.31
TMEM39B-209ENST00000498613 SULT6B1Q6IMI4 303 aa17■□□□□ 0.31
TMEM39B-209ENST00000498613 U2AF1L5P0DN76 240 aaPredicted RBP16.99■□□□□ 0.31
TMEM39B-209ENST00000498613 U2AF1Q01081 240 aaKnown RBP eCLIP16.99■□□□□ 0.31
TMEM39B-209ENST00000498613 AMOTQ4VCS5 1084 aa16.99■□□□□ 0.31
TMEM39B-209ENST00000498613 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
TMEM39B-209ENST00000498613 FAM196AQ6ZSG2 479 aa16.99■□□□□ 0.31
TMEM39B-209ENST00000498613 FAM208AQ9UK61 1670 aaKnown RBP16.99■□□□□ 0.31
TMEM39B-209ENST00000498613 IGSF1Q8N6C5 1336 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms