RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, humanhuman

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-205ENST00000497282 CDK12Q9NYV4 1490 aaPredicted RBP11.08□□□□□ -0.64
EFNA1-205ENST00000497282 PER1O15534 1290 aaPredicted RBP11.08□□□□□ -0.64
EFNA1-205ENST00000497282 AXIN2Q9Y2T1 843 aa11.08□□□□□ -0.64
EFNA1-205ENST00000497282 THSD7AQ9UPZ6 1657 aa11.08□□□□□ -0.64
EFNA1-205ENST00000497282 NSD2O96028 1365 aa11.07□□□□□ -0.64
EFNA1-205ENST00000497282 VPS72Q15906 364 aa11.07□□□□□ -0.64
EFNA1-205ENST00000497282 FAM208AQ9UK61 1670 aaKnown RBP11.07□□□□□ -0.64
EFNA1-205ENST00000497282 MAP2P11137 1827 aaKnown RBP11.07□□□□□ -0.64
EFNA1-205ENST00000497282 MAP3K19Q56UN5 1328 aa11.07□□□□□ -0.64
EFNA1-205ENST00000497282 RGPD2P0DJD1 1756 aa11.06□□□□□ -0.64
EFNA1-205ENST00000497282 RBM6P78332 1123 aaKnown RBP11.06□□□□□ -0.64
EFNA1-205ENST00000497282 RRS1Q15050 365 aaKnown RBP11.06□□□□□ -0.64
EFNA1-205ENST00000497282 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
EFNA1-205ENST00000497282 GJD4Q96KN9 370 aaPredicted RBP11.06□□□□□ -0.64
EFNA1-205ENST00000497282 STRN4Q9NRL3 753 aa11.06□□□□□ -0.64
EFNA1-205ENST00000497282 BRWD3Q6RI45 1802 aa11.06□□□□□ -0.64
EFNA1-205ENST00000497282 RXRBP28702 533 aa11.05□□□□□ -0.64
EFNA1-205ENST00000497282 BLMP54132 1417 aaPredicted RBP11.05□□□□□ -0.64
EFNA1-205ENST00000497282 CRB1P82279 1406 aa11.05□□□□□ -0.64
EFNA1-205ENST00000497282 LARP1Q6PKG0 1096 aaKnown RBP11.05□□□□□ -0.64
EFNA1-205ENST00000497282 KNSTRNQ9Y448 316 aa11.05□□□□□ -0.64
EFNA1-205ENST00000497282 SPATA31A5Q5VU36 1347 aa11.05□□□□□ -0.64
EFNA1-205ENST00000497282 SPATA31A7Q8IWB4 1347 aa11.05□□□□□ -0.64
EFNA1-205ENST00000497282 RTL1A6NKG5 1358 aa11.04□□□□□ -0.64
EFNA1-205ENST00000497282 SMG6Q86US8 1419 aaKnown RBP11.04□□□□□ -0.64
EFNA1-205ENST00000497282 CCDC9Q9Y3X0 531 aaKnown RBP11.04□□□□□ -0.64
EFNA1-205ENST00000497282 ERBB3P21860 1342 aa11.04□□□□□ -0.64
EFNA1-205ENST00000497282 SPATA31A1Q5TZJ5 1347 aa11.04□□□□□ -0.64
EFNA1-205ENST00000497282 LRRC37A3O60309 1634 aa11.03□□□□□ -0.64
EFNA1-205ENST00000497282 EMILIN1Q9Y6C2 1016 aa11.03□□□□□ -0.64
EFNA1-205ENST00000497282 PARP4Q9UKK3 1724 aaKnown RBP11.03□□□□□ -0.64
EFNA1-205ENST00000497282 WDR17Q8IZU2 1322 aa11.03□□□□□ -0.64
EFNA1-205ENST00000497282 NPC1L1Q9UHC9 1359 aa11.03□□□□□ -0.64
EFNA1-205ENST00000497282 HOXC9P31274 260 aa11.02□□□□□ -0.65
EFNA1-205ENST00000497282 TNNT2P45379 298 aaPredicted RBP11.02□□□□□ -0.65
EFNA1-205ENST00000497282 EVA1CP58658 441 aa11.02□□□□□ -0.65
EFNA1-205ENST00000497282 IP6K1Q92551 441 aa11.02□□□□□ -0.65
EFNA1-205ENST00000497282 FLT4P35916 1363 aa11.02□□□□□ -0.65
EFNA1-205ENST00000497282 KIF24Q5T7B8 1368 aa11.02□□□□□ -0.65
EFNA1-205ENST00000497282 FAM98CQ17RN3 349 aaKnown RBP11.01□□□□□ -0.65
EFNA1-205ENST00000497282 CC2D1BQ5T0F9 858 aaKnown RBP11.01□□□□□ -0.65
EFNA1-205ENST00000497282 ANKRD24Q8TF21 1146 aa11.01□□□□□ -0.65
EFNA1-205ENST00000497282 INSRP06213 1382 aa11.01□□□□□ -0.65
EFNA1-205ENST00000497282 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
EFNA1-205ENST00000497282 AMPHP49418 695 aa11□□□□□ -0.65
EFNA1-205ENST00000497282 MORC1Q86VD1 984 aa11□□□□□ -0.65
EFNA1-205ENST00000497282 USP35Q9P2H5 1018 aa11□□□□□ -0.65
EFNA1-205ENST00000497282 POLKQ9UBT6 870 aa11□□□□□ -0.65
EFNA1-205ENST00000497282 ONECUT3O60422 494 aaPredicted RBP10.99□□□□□ -0.65
EFNA1-205ENST00000497282 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
EFNA1-205ENST00000497282 CNGB1Q14028 1251 aaPredicted RBP10.99□□□□□ -0.65
EFNA1-205ENST00000497282 HSP90AB2PQ58FF8 381 aa10.99□□□□□ -0.65
EFNA1-205ENST00000497282 TOM1L2Q6ZVM7 507 aa10.99□□□□□ -0.65
EFNA1-205ENST00000497282 RGPD1P0DJD0 1748 aa10.98□□□□□ -0.65
EFNA1-205ENST00000497282 SHANK3Q9BYB0 1731 aa10.98□□□□□ -0.65
EFNA1-205ENST00000497282 DDX10Q13206 875 aaKnown RBP10.98□□□□□ -0.65
EFNA1-205ENST00000497282 BARGINQ6ZT62 677 aa10.98□□□□□ -0.65
EFNA1-205ENST00000497282 SEPT12Q8IYM1 358 aa10.98□□□□□ -0.65
EFNA1-205ENST00000497282 TCP11L2Q8N4U5 519 aa10.98□□□□□ -0.65
EFNA1-205ENST00000497282 LTV1Q96GA3 475 aaPredicted RBP10.98□□□□□ -0.65
EFNA1-205ENST00000497282 CARD10Q9BWT7 1032 aa10.98□□□□□ -0.65
EFNA1-205ENST00000497282 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
EFNA1-205ENST00000497282 THRAP3Q9Y2W1 955 aaKnown RBP10.97□□□□□ -0.65
EFNA1-205ENST00000497282 NCAPD2Q15021 1401 aa10.97□□□□□ -0.65
EFNA1-205ENST00000497282 COL3A1P02461 1466 aaPredicted RBP10.97□□□□□ -0.65
EFNA1-205ENST00000497282 MEGF6O75095 1541 aa10.96□□□□□ -0.65
EFNA1-205ENST00000497282 A0A0G2JS52 829 aa10.96□□□□□ -0.65
EFNA1-205ENST00000497282 MYT1Q01538 1121 aa10.96□□□□□ -0.65
EFNA1-205ENST00000497282 NLRP2Q9NX02 1062 aa10.96□□□□□ -0.65
EFNA1-205ENST00000497282 TNS2Q63HR2 1409 aa10.95□□□□□ -0.66
EFNA1-205ENST00000497282 ZNF316A6NFI3 1004 aaPredicted RBP10.95□□□□□ -0.66
EFNA1-205ENST00000497282 PARD3Q8TEW0 1356 aa10.94□□□□□ -0.66
EFNA1-205ENST00000497282 EIF4A2Q14240 407 aaKnown RBP10.94□□□□□ -0.66
EFNA1-205ENST00000497282 NBPF6Q5VWK0 638 aa10.94□□□□□ -0.66
EFNA1-205ENST00000497282 USHBP1Q8N6Y0 703 aa10.94□□□□□ -0.66
EFNA1-205ENST00000497282 NBPF4Q96M43 638 aa10.94□□□□□ -0.66
EFNA1-205ENST00000497282 PKD1L3Q7Z443 1732 aa10.94□□□□□ -0.66
EFNA1-205ENST00000497282 TNS1Q9HBL0 1735 aaKnown RBP10.93□□□□□ -0.66
EFNA1-205ENST00000497282 MTHFSP49914 203 aa10.93□□□□□ -0.66
EFNA1-205ENST00000497282 FAM182BQ5T319 152 aa10.93□□□□□ -0.66
EFNA1-205ENST00000497282 OVOS2A0A0G2JMS6 1433 aa10.92□□□□□ -0.66
EFNA1-205ENST00000497282 SOCS7O14512 581 aa10.92□□□□□ -0.66
EFNA1-205ENST00000497282 KRT27Q7Z3Y8 459 aa10.92□□□□□ -0.66
EFNA1-205ENST00000497282 SBF2Q86WG5 1849 aa10.91□□□□□ -0.66
EFNA1-205ENST00000497282 IGSF1Q8N6C5 1336 aa10.91□□□□□ -0.66
EFNA1-205ENST00000497282 IL2RBP14784 551 aa10.91□□□□□ -0.66
EFNA1-205ENST00000497282 PPP2R1AP30153 589 aa10.91□□□□□ -0.66
EFNA1-205ENST00000497282 EYA1Q99502 592 aa10.91□□□□□ -0.66
EFNA1-205ENST00000497282 DDB1Q16531 1140 aa10.9□□□□□ -0.66
EFNA1-205ENST00000497282 CDCA7Q9BWT1 371 aaPredicted RBP10.9□□□□□ -0.66
EFNA1-205ENST00000497282 DOT1LQ8TEK3 1739 aa10.89□□□□□ -0.67
EFNA1-205ENST00000497282 IL13P35225 146 aa10.89□□□□□ -0.67
EFNA1-205ENST00000497282 UPF1Q92900 1129 aaKnown RBP eCLIP10.89□□□□□ -0.676e-35■■■■□ 20.2
EFNA1-205ENST00000497282 NHSQ6T4R5 1651 aa10.89□□□□□ -0.67
EFNA1-205ENST00000497282 PDE3BQ13370 1112 aa10.88□□□□□ -0.67
EFNA1-205ENST00000497282 MARCH10Q8NA82 808 aaPredicted RBP10.88□□□□□ -0.67
EFNA1-205ENST00000497282 TOGARAM1Q9Y4F4 1720 aa10.88□□□□□ -0.67
EFNA1-205ENST00000497282 KDRP35968 1356 aa10.88□□□□□ -0.67
EFNA1-205ENST00000497282 AEBP1Q8IUX7 1158 aa10.87□□□□□ -0.67
EFNA1-205ENST00000497282 BCL9O00512 1426 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms